RNA–Protein interactions for RNA: ENST00000473711.1

SP140-208, Transcript of SP140 nuclear body protein, humanhuman

TSL 2

Gene SP140, Length 644 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SP140-208ENST00000473711 ARGLU1Q9NWB6 273 aaPredicted RBP11.06□□□□□ -0.64
SP140-208ENST00000473711 ZDHHC7Q9NXF8 308 aa11.06□□□□□ -0.64
SP140-208ENST00000473711 ASIC3Q9UHC3 531 aa11.06□□□□□ -0.64
SP140-208ENST00000473711 NFU1Q9UMS0 254 aa11.06□□□□□ -0.64
SP140-208ENST00000473711 CPQQ9Y646 472 aa11.06□□□□□ -0.64
SP140-208ENST00000473711 TRAV19A0A0A6YYK7 116 aa11.05□□□□□ -0.64
SP140-208ENST00000473711 BCLAF3A2AJT9 711 aaKnown RBP11.05□□□□□ -0.64
SP140-208ENST00000473711 DRGXA6NNA5 263 aa11.05□□□□□ -0.64
SP140-208ENST00000473711 TRDMT1O14717 391 aaKnown RBP11.05□□□□□ -0.64
SP140-208ENST00000473711 SCAMP3O14828 347 aaKnown RBP11.05□□□□□ -0.64
SP140-208ENST00000473711 KCNN4O15554 427 aa11.05□□□□□ -0.64
SP140-208ENST00000473711 MOSPD3O75425 235 aa11.05□□□□□ -0.64
SP140-208ENST00000473711 ERLIN1O75477 346 aa11.05□□□□□ -0.64
SP140-208ENST00000473711 CNTN5O94779 1100 aa11.05□□□□□ -0.64
SP140-208ENST00000473711 FGF19O95750 216 aa11.05□□□□□ -0.64
SP140-208ENST00000473711 OLFM2O95897 454 aa11.05□□□□□ -0.64
SP140-208ENST00000473711 CKMP06732 381 aa11.05□□□□□ -0.64
SP140-208ENST00000473711 TNFRSF8P28908 595 aa11.05□□□□□ -0.64
SP140-208ENST00000473711 HOXC13P31276 330 aa11.05□□□□□ -0.64
SP140-208ENST00000473711 SLC6A4P31645 630 aa11.05□□□□□ -0.64
SP140-208ENST00000473711 STIP1P31948 543 aaKnown RBP11.05□□□□□ -0.64
SP140-208ENST00000473711 ADCY8P40145 1251 aa11.05□□□□□ -0.64
SP140-208ENST00000473711 RPL21P46778 160 aaKnown RBP11.05□□□□□ -0.64
SP140-208ENST00000473711 IRAK1P51617 712 aa11.05□□□□□ -0.64
SP140-208ENST00000473711 DRG2P55039 364 aaKnown RBP11.05□□□□□ -0.64
SP140-208ENST00000473711 GDF10P55107 478 aa11.05□□□□□ -0.64
SP140-208ENST00000473711 MTA1Q13330 715 aa11.05□□□□□ -0.64
SP140-208ENST00000473711 CUL1Q13616 776 aa11.05□□□□□ -0.64
SP140-208ENST00000473711 HLTFQ14527 1009 aaKnown RBP eCLIP11.05□□□□□ -0.64
SP140-208ENST00000473711 PDK1Q15118 436 aa11.05□□□□□ -0.64
SP140-208ENST00000473711 ARHGAP15Q53QZ3 475 aa11.05□□□□□ -0.64
SP140-208ENST00000473711 SLC45A4Q5BKX6 768 aa11.05□□□□□ -0.64
SP140-208ENST00000473711 RFWD3Q6PCD5 774 aa11.05□□□□□ -0.64
SP140-208ENST00000473711 CDKL3Q8IVW4 592 aaPredicted RBP11.05□□□□□ -0.64
SP140-208ENST00000473711 LGI2Q8N0V4 545 aa11.05□□□□□ -0.64
SP140-208ENST00000473711 NPWQ8N729 165 aa11.05□□□□□ -0.64
SP140-208ENST00000473711 CCDC89Q8N998 374 aa11.05□□□□□ -0.64
SP140-208ENST00000473711 CCNYQ8ND76 341 aa11.05□□□□□ -0.64
SP140-208ENST00000473711 VN1R2Q8NFZ6 395 aa11.05□□□□□ -0.64
SP140-208ENST00000473711 ADAMTS19Q8TE59 1207 aa11.05□□□□□ -0.64
SP140-208ENST00000473711 SEC14L1Q92503 715 aa11.05□□□□□ -0.64
SP140-208ENST00000473711 AZIN2Q96A70 460 aa11.05□□□□□ -0.64
SP140-208ENST00000473711 ZNF707Q96C28 371 aaPredicted RBP11.05□□□□□ -0.64
SP140-208ENST00000473711 MRPL38Q96DV4 380 aaKnown RBP11.05□□□□□ -0.64
SP140-208ENST00000473711 MYEOVQ96EZ4 313 aa11.05□□□□□ -0.64
SP140-208ENST00000473711 CELF6Q96J87 481 aaKnown RBP11.05□□□□□ -0.64
SP140-208ENST00000473711 ZYG11BQ9C0D3 744 aa11.05□□□□□ -0.64
SP140-208ENST00000473711 USP29Q9HBJ7 922 aa11.05□□□□□ -0.64
SP140-208ENST00000473711 AGO1Q9UL18 857 aaKnown RBP11.05□□□□□ -0.64
SP140-208ENST00000473711 NEU3Q9UQ49 428 aa11.05□□□□□ -0.64
SP140-208ENST00000473711 CCDC151A5D8V7 595 aa11.04□□□□□ -0.64
SP140-208ENST00000473711 HACD1B0YJ81 288 aa11.04□□□□□ -0.64
SP140-208ENST00000473711 F5H5T6 163 aa11.04□□□□□ -0.64
SP140-208ENST00000473711 FGF10O15520 208 aaPredicted RBP11.04□□□□□ -0.64
SP140-208ENST00000473711 TSPAN3O60637 253 aa11.04□□□□□ -0.64
SP140-208ENST00000473711 SEC31AO94979 1220 aaKnown RBP11.04□□□□□ -0.64
SP140-208ENST00000473711 RHOQP17081 205 aa11.04□□□□□ -0.64
SP140-208ENST00000473711 IVDP26440 423 aa11.04□□□□□ -0.64
SP140-208ENST00000473711 SERPINB6P35237 376 aa11.04□□□□□ -0.64
SP140-208ENST00000473711 RPL22P35268 128 aaKnown RBP11.04□□□□□ -0.64
SP140-208ENST00000473711 NRLP54845 237 aa11.04□□□□□ -0.64
SP140-208ENST00000473711 PLTPP55058 493 aa11.04□□□□□ -0.64
SP140-208ENST00000473711 SLC7A9P82251 487 aa11.04□□□□□ -0.64
SP140-208ENST00000473711 ZXDBP98169 803 aa11.04□□□□□ -0.64
SP140-208ENST00000473711 AP1B1Q10567 949 aa11.04□□□□□ -0.64
SP140-208ENST00000473711 GPS1Q13098 491 aa11.04□□□□□ -0.64
SP140-208ENST00000473711 SLC5A9Q2M3M2 681 aa11.04□□□□□ -0.64
SP140-208ENST00000473711 ALFQ53S48 1182 aa11.04□□□□□ -0.64
SP140-208ENST00000473711 FAM133BQ5BKY9 247 aaKnown RBP11.04□□□□□ -0.64
SP140-208ENST00000473711 ACBD5Q5T8D3 534 aaPredicted RBP11.04□□□□□ -0.64
SP140-208ENST00000473711 TMC5Q6UXY8 1006 aa11.04□□□□□ -0.64
SP140-208ENST00000473711 CIR1Q86X95 450 aaPredicted RBP11.04□□□□□ -0.64
SP140-208ENST00000473711 CFAP52Q8N1V2 620 aa11.04□□□□□ -0.64
SP140-208ENST00000473711 TAB3Q8N5C8 712 aaPredicted RBP11.04□□□□□ -0.64
SP140-208ENST00000473711 RTL3Q8N8U3 475 aaKnown RBP11.04□□□□□ -0.64
SP140-208ENST00000473711 TFB1MQ8WVM0 346 aaKnown RBP11.04□□□□□ -0.64
SP140-208ENST00000473711 SMG7Q92540 1137 aaKnown RBP11.04□□□□□ -0.64
SP140-208ENST00000473711 RPRD1AQ96P16 312 aaPredicted RBP11.04□□□□□ -0.64
SP140-208ENST00000473711 OLFM3Q96PB7 478 aa11.04□□□□□ -0.64
SP140-208ENST00000473711 QKIQ96PU8 341 aaKnown RBP eCLIP11.04□□□□□ -0.64
SP140-208ENST00000473711 LGMNQ99538 433 aa11.04□□□□□ -0.64
SP140-208ENST00000473711 CDCA3Q99618 268 aaPredicted RBP11.04□□□□□ -0.64
SP140-208ENST00000473711 DDX50Q9BQ39 737 aaKnown RBP11.04□□□□□ -0.64
SP140-208ENST00000473711 SLC39A8Q9C0K1 460 aa11.04□□□□□ -0.64
SP140-208ENST00000473711 KLC2Q9H0B6 622 aa11.04□□□□□ -0.64
SP140-208ENST00000473711 SMG9Q9H0W8 520 aaKnown RBP11.04□□□□□ -0.64
SP140-208ENST00000473711 NEUROG2Q9H2A3 272 aa11.04□□□□□ -0.64
SP140-208ENST00000473711 PRDM12Q9H4Q4 367 aa11.04□□□□□ -0.64
SP140-208ENST00000473711 TASP1Q9H6P5 420 aa11.04□□□□□ -0.64
SP140-208ENST00000473711 NDFIP2Q9NV92 336 aa11.04□□□□□ -0.64
SP140-208ENST00000473711 GRHL1Q9NZI5 618 aa11.04□□□□□ -0.64
SP140-208ENST00000473711 CFAP97Q9P2B7 532 aa11.04□□□□□ -0.64
SP140-208ENST00000473711 PPARGC1AQ9UBK2 798 aaKnown RBP11.04□□□□□ -0.64
SP140-208ENST00000473711 MTCL1Q9Y4B5 1905 aaKnown RBP11.03□□□□□ -0.64
SP140-208ENST00000473711 IGLV3-10A0A075B6K4 115 aa11.03□□□□□ -0.64
SP140-208ENST00000473711 CFAP69A5D8W1 941 aa11.03□□□□□ -0.64
SP140-208ENST00000473711 WASH4PA8MWX3 477 aa11.03□□□□□ -0.64
SP140-208ENST00000473711 DFFAO00273 331 aa11.03□□□□□ -0.64
SP140-208ENST00000473711 ZNF197O14709 1029 aa11.03□□□□□ -0.64
SP140-208ENST00000473711 PPP1R12AO14974 1030 aaPredicted RBP11.03□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms