RNA–Protein interactions for RNA: ENST00000473345.5

MCF2L-223, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 3

Gene MCF2L, Length 399 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-223ENST00000473345 MXI1P50539 228 aa9.97□□□□□ -0.81
MCF2L-223ENST00000473345 CCR5P51681 352 aa9.97□□□□□ -0.81
MCF2L-223ENST00000473345 NDUFA8P51970 172 aa9.97□□□□□ -0.81
MCF2L-223ENST00000473345 C21orf59P57076 290 aa9.97□□□□□ -0.81
MCF2L-223ENST00000473345 TAS2R38P59533 333 aa9.97□□□□□ -0.81
MCF2L-223ENST00000473345 C1QBPQ07021 282 aaKnown RBP9.97□□□□□ -0.81
MCF2L-223ENST00000473345 BST2Q10589 180 aaKnown RBP9.97□□□□□ -0.81
MCF2L-223ENST00000473345 LRMPQ12912 555 aa9.97□□□□□ -0.81
MCF2L-223ENST00000473345 ADAM9Q13443 819 aa9.97□□□□□ -0.81
MCF2L-223ENST00000473345 CUL2Q13617 745 aa9.97□□□□□ -0.81
MCF2L-223ENST00000473345 ARID5BQ14865 1188 aa9.97□□□□□ -0.81
MCF2L-223ENST00000473345 POM121L1PQ3SYA9 428 aa9.97□□□□□ -0.81
MCF2L-223ENST00000473345 DCAF6Q58WW2 860 aa9.97□□□□□ -0.81
MCF2L-223ENST00000473345 MS4A13Q5J8X5 152 aa9.97□□□□□ -0.81
MCF2L-223ENST00000473345 SYPL2Q5VXT5 272 aa9.97□□□□□ -0.81
MCF2L-223ENST00000473345 KRT39Q6A163 491 aa9.97□□□□□ -0.81
MCF2L-223ENST00000473345 MFN1Q8IWA4 741 aa9.97□□□□□ -0.81
MCF2L-223ENST00000473345 CEP57L1Q8IYX8 460 aa9.97□□□□□ -0.81
MCF2L-223ENST00000473345 CARNMT1Q8N4J0 409 aa9.97□□□□□ -0.81
MCF2L-223ENST00000473345 DCBLD1Q8N8Z6 715 aa9.97□□□□□ -0.81
MCF2L-223ENST00000473345 FBXL13Q8NEE6 735 aa9.97□□□□□ -0.81
MCF2L-223ENST00000473345 OR2T34Q8NGX1 318 aa9.97□□□□□ -0.81
MCF2L-223ENST00000473345 GANCQ8TET4 914 aa9.97□□□□□ -0.81
MCF2L-223ENST00000473345 FRS2Q8WU20 508 aa9.97□□□□□ -0.81
MCF2L-223ENST00000473345 KCTD13Q8WZ19 329 aa9.97□□□□□ -0.81
MCF2L-223ENST00000473345 RFFLQ8WZ73 363 aa9.97□□□□□ -0.81
MCF2L-223ENST00000473345 SLC39A13Q96H72 371 aa9.97□□□□□ -0.81
MCF2L-223ENST00000473345 NAF1Q96HR8 494 aaKnown RBP9.97□□□□□ -0.81
MCF2L-223ENST00000473345 SERAC1Q96JX3 654 aa9.97□□□□□ -0.81
MCF2L-223ENST00000473345 IMPG2Q9BZV3 1241 aa9.97□□□□□ -0.81
MCF2L-223ENST00000473345 NRSN2Q9GZP1 204 aa9.97□□□□□ -0.81
MCF2L-223ENST00000473345 LRRC4Q9HBW1 653 aa9.97□□□□□ -0.81
MCF2L-223ENST00000473345 AASDHPPTQ9NRN7 309 aa9.97□□□□□ -0.81
MCF2L-223ENST00000473345 FAM13BQ9NYF5 915 aa9.97□□□□□ -0.81
MCF2L-223ENST00000473345 ZDHHC9Q9Y397 364 aa9.97□□□□□ -0.81
MCF2L-223ENST00000473345 ITIH6Q6UXX5 1313 aa9.97□□□□□ -0.81
MCF2L-223ENST00000473345 NYNRINQ9P2P1 1898 aaKnown RBP9.97□□□□□ -0.81
MCF2L-223ENST00000473345 ARID1BQ8NFD5 2236 aaPredicted RBP9.97□□□□□ -0.81
MCF2L-223ENST00000473345 TK2O00142 265 aa9.96□□□□□ -0.82
MCF2L-223ENST00000473345 SIGLEC6O43699 453 aa9.96□□□□□ -0.82
MCF2L-223ENST00000473345 ATP5BP06576 529 aaKnown RBP9.96□□□□□ -0.82
MCF2L-223ENST00000473345 BRD2P25440 801 aaKnown RBP9.96□□□□□ -0.82
MCF2L-223ENST00000473345 MZF1P28698 734 aaPredicted RBP9.96□□□□□ -0.82
MCF2L-223ENST00000473345 PSMC2P35998 433 aaKnown RBP9.96□□□□□ -0.82
MCF2L-223ENST00000473345 ENPEPQ07075 957 aa9.96□□□□□ -0.82
MCF2L-223ENST00000473345 TBC1D25Q3MII6 688 aa9.96□□□□□ -0.82
MCF2L-223ENST00000473345 TTC31Q49AM3 519 aaPredicted RBP9.96□□□□□ -0.82
MCF2L-223ENST00000473345 MPP7Q5T2T1 576 aa9.96□□□□□ -0.82
MCF2L-223ENST00000473345 C6orf118Q5T5N4 469 aa9.96□□□□□ -0.82
MCF2L-223ENST00000473345 KDM7AQ6ZMT4 941 aa9.96□□□□□ -0.82
MCF2L-223ENST00000473345 SCML4Q8N228 414 aa9.96□□□□□ -0.82
MCF2L-223ENST00000473345 GUF1Q8N442 669 aaKnown RBP9.96□□□□□ -0.82
MCF2L-223ENST00000473345 OR14C36Q8NHC7 312 aa9.96□□□□□ -0.82
MCF2L-223ENST00000473345 DQX1Q8TE96 717 aaKnown RBP9.96□□□□□ -0.82
MCF2L-223ENST00000473345 RNF139Q8WU17 664 aa9.96□□□□□ -0.82
MCF2L-223ENST00000473345 ALG14Q96F25 216 aa9.96□□□□□ -0.82
MCF2L-223ENST00000473345 HIC2Q96JB3 615 aa9.96□□□□□ -0.82
MCF2L-223ENST00000473345 NOX5Q96PH1 765 aa9.96□□□□□ -0.82
MCF2L-223ENST00000473345 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP9.96□□□□□ -0.82
MCF2L-223ENST00000473345 FBRSQ9HAH7 460 aa9.96□□□□□ -0.82
MCF2L-223ENST00000473345 CPNE5Q9HCH3 593 aa9.96□□□□□ -0.82
MCF2L-223ENST00000473345 ABCC13Q9NSE7 274 aa9.96□□□□□ -0.82
MCF2L-223ENST00000473345 OLA1Q9NTK5 396 aaKnown RBP9.96□□□□□ -0.82
MCF2L-223ENST00000473345 TJP2Q9UDY2 1190 aa9.96□□□□□ -0.82
MCF2L-223ENST00000473345 SUN2Q9UH99 717 aa9.96□□□□□ -0.82
MCF2L-223ENST00000473345 CYTH4Q9UIA0 394 aa9.96□□□□□ -0.82
MCF2L-223ENST00000473345 NAALADL1Q9UQQ1 740 aa9.96□□□□□ -0.82
MCF2L-223ENST00000473345 COQ4Q9Y3A0 265 aa9.96□□□□□ -0.82
MCF2L-223ENST00000473345 ZNF462Q96JM2 2506 aa9.96□□□□□ -0.82
MCF2L-223ENST00000473345 ATMQ13315 3056 aa9.95□□□□□ -0.82
MCF2L-223ENST00000473345 FAM237AA0A1B0GTK4 181 aa9.95□□□□□ -0.82
MCF2L-223ENST00000473345 DFNA5O60443 496 aa9.95□□□□□ -0.82
MCF2L-223ENST00000473345 LUC7L3O95232 432 aaKnown RBP9.95□□□□□ -0.82
MCF2L-223ENST00000473345 LTFP02788 710 aa9.95□□□□□ -0.82
MCF2L-223ENST00000473345 C1SP09871 688 aa9.95□□□□□ -0.82
MCF2L-223ENST00000473345 KRT13P13646 458 aa9.95□□□□□ -0.82
MCF2L-223ENST00000473345 CD19P15391 556 aa9.95□□□□□ -0.82
MCF2L-223ENST00000473345 GOT1P17174 413 aa9.95□□□□□ -0.82
MCF2L-223ENST00000473345 CKMT2P17540 419 aa9.95□□□□□ -0.82
MCF2L-223ENST00000473345 ABCB4P21439 1286 aa9.95□□□□□ -0.82
MCF2L-223ENST00000473345 CMA1P23946 247 aa9.95□□□□□ -0.82
MCF2L-223ENST00000473345 GTF2H1P32780 548 aa9.95□□□□□ -0.82
MCF2L-223ENST00000473345 TBX4P57082 545 aa9.95□□□□□ -0.82
MCF2L-223ENST00000473345 CXADRP78310 365 aa9.95□□□□□ -0.82
MCF2L-223ENST00000473345 EIF4EBP2Q13542 120 aaPredicted RBP9.95□□□□□ -0.82
MCF2L-223ENST00000473345 SGO2Q562F6 1265 aa9.95□□□□□ -0.82
MCF2L-223ENST00000473345 ARTNQ5T4W7 220 aa9.95□□□□□ -0.82
MCF2L-223ENST00000473345 CDCP2Q5VXM1 449 aa9.95□□□□□ -0.82
MCF2L-223ENST00000473345 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP9.95□□□□□ -0.82
MCF2L-223ENST00000473345 TAC4Q86UU9 113 aa9.95□□□□□ -0.82
MCF2L-223ENST00000473345 GOLGA1Q92805 767 aa9.95□□□□□ -0.82
MCF2L-223ENST00000473345 FGF11Q92914 225 aa9.95□□□□□ -0.82
MCF2L-223ENST00000473345 MYOCQ99972 504 aa9.95□□□□□ -0.82
MCF2L-223ENST00000473345 MIS12Q9H081 205 aa9.95□□□□□ -0.82
MCF2L-223ENST00000473345 CNGB3Q9NQW8 809 aa9.95□□□□□ -0.82
MCF2L-223ENST00000473345 GDF3Q9NR23 364 aa9.95□□□□□ -0.82
MCF2L-223ENST00000473345 FZD4Q9ULV1 537 aa9.95□□□□□ -0.82
MCF2L-223ENST00000473345 DOCK9Q9BZ29 2069 aa9.95□□□□□ -0.82
MCF2L-223ENST00000473345 TARSL2A2RTX5 802 aaKnown RBP9.94□□□□□ -0.82
MCF2L-223ENST00000473345 TRIM49BA6NDI0 452 aa9.94□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms