RNA–Protein interactions for RNA: ENST00000472806.1

CCDC171-205, Transcript of coiled-coil domain containing 171, humanhuman

TSL 3

Gene CCDC171, Length 478 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC171-205ENST00000472806 TTLL3Q9Y4R7 772 aa7.85□□□□□ -1.15
CCDC171-205ENST00000472806 MAD1L1Q9Y6D9 718 aa7.85□□□□□ -1.15
CCDC171-205ENST00000472806 USP3Q9Y6I4 520 aa7.85□□□□□ -1.15
CCDC171-205ENST00000472806 MAGEB16A2A368 324 aa7.84□□□□□ -1.15
CCDC171-205ENST00000472806 ARL5CA6NH57 179 aa7.84□□□□□ -1.15
CCDC171-205ENST00000472806 FAM159BA6NKW6 160 aa7.84□□□□□ -1.15
CCDC171-205ENST00000472806 RNF103O00237 685 aa7.84□□□□□ -1.15
CCDC171-205ENST00000472806 CLDN5O00501 218 aa7.84□□□□□ -1.15
CCDC171-205ENST00000472806 KLF11O14901 512 aa7.84□□□□□ -1.15
CCDC171-205ENST00000472806 CHUKO15111 745 aa7.84□□□□□ -1.15
CCDC171-205ENST00000472806 CREB3O43889 395 aa7.84□□□□□ -1.15
CCDC171-205ENST00000472806 UBOX5O94941 541 aa7.84□□□□□ -1.15
CCDC171-205ENST00000472806 METTL18O95568 372 aa7.84□□□□□ -1.15
CCDC171-205ENST00000472806 NCAM1P13591 858 aa7.84□□□□□ -1.15
CCDC171-205ENST00000472806 TYMPP19971 482 aa7.84□□□□□ -1.15
CCDC171-205ENST00000472806 ACAT1P24752 427 aaKnown RBP7.84□□□□□ -1.15
CCDC171-205ENST00000472806 CST5P28325 142 aaPredicted RBP7.84□□□□□ -1.15
CCDC171-205ENST00000472806 HNRNPH1P31943 449 aaKnown RBP7.84□□□□□ -1.15
CCDC171-205ENST00000472806 SLC8A1P32418 973 aa7.84□□□□□ -1.15
CCDC171-205ENST00000472806 TM4SF4P48230 202 aa7.84□□□□□ -1.15
CCDC171-205ENST00000472806 NEK3P51956 506 aa7.84□□□□□ -1.15
CCDC171-205ENST00000472806 FAAP100Q0VG06 881 aa7.84□□□□□ -1.15
CCDC171-205ENST00000472806 NME3Q13232 169 aa7.84□□□□□ -1.15
CCDC171-205ENST00000472806 TUSC3Q13454 348 aa7.84□□□□□ -1.15
CCDC171-205ENST00000472806 DPYSQ14117 519 aa7.84□□□□□ -1.15
CCDC171-205ENST00000472806 FRG1Q14331 258 aaKnown RBP7.84□□□□□ -1.15
CCDC171-205ENST00000472806 PRPSAP1Q14558 356 aa7.84□□□□□ -1.15
CCDC171-205ENST00000472806 EFTUD2Q15029 972 aaKnown RBP eCLIP7.84□□□□□ -1.15
CCDC171-205ENST00000472806 SLC1A5Q15758 541 aa7.84□□□□□ -1.15
CCDC171-205ENST00000472806 PLA2G4EQ3MJ16 856 aa7.84□□□□□ -1.15
CCDC171-205ENST00000472806 RAB6CQ53S08 254 aa7.84□□□□□ -1.15
CCDC171-205ENST00000472806 FAM133BQ5BKY9 247 aaKnown RBP7.84□□□□□ -1.15
CCDC171-205ENST00000472806 SPANXN3Q5MJ09 141 aa7.84□□□□□ -1.15
CCDC171-205ENST00000472806 STXBP5Q5T5C0 1151 aa7.84□□□□□ -1.15
CCDC171-205ENST00000472806 ZNF618Q5T7W0 954 aa7.84□□□□□ -1.15
CCDC171-205ENST00000472806 STEAP4Q687X5 459 aa7.84□□□□□ -1.15
CCDC171-205ENST00000472806 GDF6Q6KF10 455 aaPredicted RBP7.84□□□□□ -1.15
CCDC171-205ENST00000472806 CYB5D1Q6P9G0 228 aa7.84□□□□□ -1.15
CCDC171-205ENST00000472806 CXCL17Q6UXB2 119 aa7.84□□□□□ -1.15
CCDC171-205ENST00000472806 UNC5AQ6ZN44 842 aa7.84□□□□□ -1.15
CCDC171-205ENST00000472806 TIFABQ6ZNK6 161 aa7.84□□□□□ -1.15
CCDC171-205ENST00000472806 C4orf50Q6ZRC1 276 aa7.84□□□□□ -1.15
CCDC171-205ENST00000472806 DENND5BQ6ZUT9 1274 aa7.84□□□□□ -1.15
CCDC171-205ENST00000472806 FAM47EQ6ZV65 393 aa7.84□□□□□ -1.15
CCDC171-205ENST00000472806 PAQR9Q6ZVX9 377 aa7.84□□□□□ -1.15
CCDC171-205ENST00000472806 MARK2Q7KZI7 788 aaKnown RBP7.84□□□□□ -1.15
CCDC171-205ENST00000472806 SAPCD2Q86UD0 394 aa7.84□□□□□ -1.15
CCDC171-205ENST00000472806 CAND1Q86VP6 1230 aaKnown RBP7.84□□□□□ -1.15
CCDC171-205ENST00000472806 CCNYQ8ND76 341 aa7.84□□□□□ -1.15
CCDC171-205ENST00000472806 SMC1BQ8NDV3 1235 aa7.84□□□□□ -1.15
CCDC171-205ENST00000472806 MAGEC3Q8TD91 643 aa7.84□□□□□ -1.15
CCDC171-205ENST00000472806 TTC17Q96AE7 1141 aa7.84□□□□□ -1.15
CCDC171-205ENST00000472806 KLHL29Q96CT2 875 aa7.84□□□□□ -1.15
CCDC171-205ENST00000472806 SIGLEC10Q96LC7 697 aa7.84□□□□□ -1.15
CCDC171-205ENST00000472806 LRRC37BQ96QE4 947 aa7.84□□□□□ -1.15
CCDC171-205ENST00000472806 LPIN3Q9BQK8 851 aa7.84□□□□□ -1.15
CCDC171-205ENST00000472806 WDR83Q9BRX9 315 aaKnown RBP7.84□□□□□ -1.15
CCDC171-205ENST00000472806 RAB6CQ9H0N0 254 aa7.84□□□□□ -1.15
CCDC171-205ENST00000472806 WDCPQ9H6R7 721 aa7.84□□□□□ -1.15
CCDC171-205ENST00000472806 MANSC1Q9H8J5 431 aa7.84□□□□□ -1.15
CCDC171-205ENST00000472806 ECT2Q9H8V3 914 aa7.84□□□□□ -1.15
CCDC171-205ENST00000472806 KIF9Q9HAQ2 790 aa7.84□□□□□ -1.15
CCDC171-205ENST00000472806 CSNK1G1Q9HCP0 422 aa7.84□□□□□ -1.15
CCDC171-205ENST00000472806 DMAP1Q9NPF5 467 aaPredicted RBP7.84□□□□□ -1.15
CCDC171-205ENST00000472806 CRTAC1Q9NQ79 661 aa7.84□□□□□ -1.15
CCDC171-205ENST00000472806 XPNPEP3Q9NQH7 507 aa7.84□□□□□ -1.15
CCDC171-205ENST00000472806 ABCF3Q9NUQ8 709 aa7.84□□□□□ -1.15
CCDC171-205ENST00000472806 DONSONQ9NYP3 566 aa7.84□□□□□ -1.15
CCDC171-205ENST00000472806 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP7.84□□□□□ -1.15
CCDC171-205ENST00000472806 KLHL8Q9P2G9 620 aaPredicted RBP7.84□□□□□ -1.15
CCDC171-205ENST00000472806 FBXW11Q9UKB1 542 aa7.84□□□□□ -1.15
CCDC171-205ENST00000472806 NOD1Q9Y239 953 aa7.84□□□□□ -1.15
CCDC171-205ENST00000472806 MTO1Q9Y2Z2 717 aaKnown RBP7.84□□□□□ -1.15
CCDC171-205ENST00000472806 TRIP11Q15643 1979 aa7.84□□□□□ -1.15
CCDC171-205ENST00000472806 A0A0U1RQF3 1178 aa7.83□□□□□ -1.16
CCDC171-205ENST00000472806 TRIM49D1C9J1S8 452 aa7.83□□□□□ -1.16
CCDC171-205ENST00000472806 M0QZQ0 153 aa7.83□□□□□ -1.16
CCDC171-205ENST00000472806 C2CD2LO14523 706 aa7.83□□□□□ -1.16
CCDC171-205ENST00000472806 DCLK1O15075 740 aa7.83□□□□□ -1.16
CCDC171-205ENST00000472806 BIRC5O15392 142 aa7.83□□□□□ -1.16
CCDC171-205ENST00000472806 HCRTO43612 131 aa7.83□□□□□ -1.16
CCDC171-205ENST00000472806 MFSD11O43934 449 aa7.83□□□□□ -1.16
CCDC171-205ENST00000472806 ALDH1A2O94788 518 aa7.83□□□□□ -1.16
CCDC171-205ENST00000472806 CHRNA1P02708 482 aa7.83□□□□□ -1.16
CCDC171-205ENST00000472806 POLBP06746 335 aa7.83□□□□□ -1.16
CCDC171-205ENST00000472806 CTSHP09668 335 aa7.83□□□□□ -1.16
CCDC171-205ENST00000472806 DHRS4L1P0CG22 281 aa7.83□□□□□ -1.16
CCDC171-205ENST00000472806 SRGAP2BP0DMP2 458 aa7.83□□□□□ -1.16
CCDC171-205ENST00000472806 NQO1P15559 274 aaKnown RBP7.83□□□□□ -1.16
CCDC171-205ENST00000472806 TFE3P19532 575 aaPredicted RBP7.83□□□□□ -1.16
CCDC171-205ENST00000472806 GPC1P35052 558 aa7.83□□□□□ -1.16
CCDC171-205ENST00000472806 THPOP40225 353 aa7.83□□□□□ -1.16
CCDC171-205ENST00000472806 CCNFP41002 786 aa7.83□□□□□ -1.16
CCDC171-205ENST00000472806 NPY2RP49146 381 aa7.83□□□□□ -1.16
CCDC171-205ENST00000472806 SCNN1GP51170 649 aa7.83□□□□□ -1.16
CCDC171-205ENST00000472806 CLCNKBP51801 687 aa7.83□□□□□ -1.16
CCDC171-205ENST00000472806 ATXN1P54253 815 aaKnown RBP7.83□□□□□ -1.16
CCDC171-205ENST00000472806 CDK18Q07002 472 aa7.83□□□□□ -1.16
CCDC171-205ENST00000472806 SLC10A2Q12908 348 aaPredicted RBP7.83□□□□□ -1.16
CCDC171-205ENST00000472806 CRHR2Q13324 411 aa7.83□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms