RNA–Protein interactions for RNA: ENST00000472697.5

XRN1-210, Transcript of 5'-3' exoribonuclease 1, humanhuman

TSL 2

Gene XRN1, Length 2,652 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRN1-210ENST00000472697 TRAV34A0A0B4J273 112 aa2.84□□□□□ -1.95
XRN1-210ENST00000472697 A0A1W2PQM1 296 aa2.84□□□□□ -1.95
XRN1-210ENST00000472697 FAM90A8PA6NJQ4 464 aa2.84□□□□□ -1.95
XRN1-210ENST00000472697 DRGXA6NNA5 263 aa2.84□□□□□ -1.95
XRN1-210ENST00000472697 ZAR1LA6NP61 321 aa2.84□□□□□ -1.95
XRN1-210ENST00000472697 TMEM232C9JQI7 657 aa2.84□□□□□ -1.95
XRN1-210ENST00000472697 CLGNO14967 610 aa2.84□□□□□ -1.95
XRN1-210ENST00000472697 GGPS1O95749 300 aa2.84□□□□□ -1.95
XRN1-210ENST00000472697 SCGB1D1O95968 90 aa2.84□□□□□ -1.95
XRN1-210ENST00000472697 AFPP02771 609 aaKnown RBP2.84□□□□□ -1.95
XRN1-210ENST00000472697 KRT1P04264 644 aa2.84□□□□□ -1.95
XRN1-210ENST00000472697 FAM90A13PP0C7W8 464 aa2.84□□□□□ -1.95
XRN1-210ENST00000472697 FAM90A24PP0C7X0 464 aa2.84□□□□□ -1.95
XRN1-210ENST00000472697 IDEP14735 1019 aa2.84□□□□□ -1.95
XRN1-210ENST00000472697 AGAP20933 346 aa2.84□□□□□ -1.95
XRN1-210ENST00000472697 ITGB7P26010 798 aa2.84□□□□□ -1.95
XRN1-210ENST00000472697 IL13P35225 146 aa2.84□□□□□ -1.95
XRN1-210ENST00000472697 ARL4AP40617 200 aa2.84□□□□□ -1.95
XRN1-210ENST00000472697 HNF4AP41235 474 aa2.84□□□□□ -1.95
XRN1-210ENST00000472697 MTHFRP42898 656 aa2.84□□□□□ -1.95
XRN1-210ENST00000472697 TAS2R50P59544 299 aa2.84□□□□□ -1.95
XRN1-210ENST00000472697 ACTN3Q08043 901 aaPredicted RBP2.84□□□□□ -1.95
XRN1-210ENST00000472697 SP140Q13342 867 aa2.84□□□□□ -1.95
XRN1-210ENST00000472697 COG2Q14746 738 aa2.84□□□□□ -1.95
XRN1-210ENST00000472697 LETM2Q2VYF4 491 aa2.84□□□□□ -1.95
XRN1-210ENST00000472697 ZNF766Q5HY98 468 aa2.84□□□□□ -1.95
XRN1-210ENST00000472697 RBM20Q5T481 1227 aaKnown RBP2.84□□□□□ -1.95
XRN1-210ENST00000472697 MCTP2Q6DN12 878 aa2.84□□□□□ -1.95
XRN1-210ENST00000472697 GPR139Q6DWJ6 353 aa2.84□□□□□ -1.95
XRN1-210ENST00000472697 TATDN1Q6P1N9 297 aa2.84□□□□□ -1.95
XRN1-210ENST00000472697 KLHL35Q6PF15 583 aa2.84□□□□□ -1.95
XRN1-210ENST00000472697 OTOAQ7RTW8 1153 aa2.84□□□□□ -1.95
XRN1-210ENST00000472697 CATSPER4Q7RTX7 472 aa2.84□□□□□ -1.95
XRN1-210ENST00000472697 KRT27Q7Z3Y8 459 aa2.84□□□□□ -1.95
XRN1-210ENST00000472697 TRABD2AQ86V40 505 aa2.84□□□□□ -1.95
XRN1-210ENST00000472697 GPR135Q8IZ08 494 aa2.84□□□□□ -1.95
XRN1-210ENST00000472697 CADM4Q8NFZ8 388 aa2.84□□□□□ -1.95
XRN1-210ENST00000472697 UTP15Q8TED0 518 aaKnown RBP2.84□□□□□ -1.95
XRN1-210ENST00000472697 SCAMP4Q969E2 229 aa2.84□□□□□ -1.95
XRN1-210ENST00000472697 INTS12Q96CB8 462 aaKnown RBP2.84□□□□□ -1.95
XRN1-210ENST00000472697 SPATA13Q96N96 652 aa2.84□□□□□ -1.95
XRN1-210ENST00000472697 MRPL9Q9BYD2 267 aaKnown RBP2.84□□□□□ -1.95
XRN1-210ENST00000472697 KRTAP4-11Q9BYQ6 195 aa2.84□□□□□ -1.95
XRN1-210ENST00000472697 TRIM5Q9C035 493 aa2.84□□□□□ -1.95
XRN1-210ENST00000472697 TKTL2Q9H0I9 626 aa2.84□□□□□ -1.95
XRN1-210ENST00000472697 EPB41L4BQ9H329 900 aa2.84□□□□□ -1.95
XRN1-210ENST00000472697 EPHX3Q9H6B9 360 aa2.84□□□□□ -1.95
XRN1-210ENST00000472697 IL23AQ9NPF7 189 aa2.84□□□□□ -1.95
XRN1-210ENST00000472697 WSB2Q9NYS7 404 aaPredicted RBP2.84□□□□□ -1.95
XRN1-210ENST00000472697 PLA2G3Q9NZ20 509 aa2.84□□□□□ -1.95
XRN1-210ENST00000472697 NOP53Q9NZM5 478 aaKnown RBP2.84□□□□□ -1.95
XRN1-210ENST00000472697 NLKQ9UBE8 527 aa2.84□□□□□ -1.95
XRN1-210ENST00000472697 KLQ9UEF7 1012 aa2.84□□□□□ -1.95
XRN1-210ENST00000472697 CNOT8Q9UFF9 292 aaKnown RBP2.84□□□□□ -1.95
XRN1-210ENST00000472697 USP22Q9UPT9 525 aa2.84□□□□□ -1.95
XRN1-210ENST00000472697 YBX2Q9Y2T7 364 aaKnown RBP2.84□□□□□ -1.95
XRN1-210ENST00000472697 PCDHGA5Q9Y5G8 931 aa2.84□□□□□ -1.95
XRN1-210ENST00000472697 PCDHGA1Q9Y5H4 931 aa2.84□□□□□ -1.95
XRN1-210ENST00000472697 POMT1Q9Y6A1 747 aa2.84□□□□□ -1.95
XRN1-210ENST00000472697 FPGT-TNNI3KV9GXZ4 949 aa2.84□□□□□ -1.95
XRN1-210ENST00000472697 SCAPERQ9BY12 1400 aa2.84□□□□□ -1.95
XRN1-210ENST00000472697 SETBP1Q9Y6X0 1596 aa2.84□□□□□ -1.95
XRN1-210ENST00000472697 ASTN2O75129 1339 aaPredicted RBP2.84□□□□□ -1.95
XRN1-210ENST00000472697 NKTRP30414 1462 aaKnown RBP2.84□□□□□ -1.95
XRN1-210ENST00000472697 NUP153P49790 1475 aaKnown RBP2.84□□□□□ -1.95
XRN1-210ENST00000472697 CAMSAP2Q08AD1 1489 aa2.84□□□□□ -1.95
XRN1-210ENST00000472697 PLRG1O43660 514 aaKnown RBP2.84□□□□□ -1.96
XRN1-210ENST00000472697 IGLV1-40P01703 118 aa2.84□□□□□ -1.96
XRN1-210ENST00000472697 C8AP07357 584 aa2.84□□□□□ -1.96
XRN1-210ENST00000472697 SUPT20HL2P0C7V6 817 aa2.84□□□□□ -1.96
XRN1-210ENST00000472697 HSPA1AP0DMV8 641 aaKnown RBP2.84□□□□□ -1.96
XRN1-210ENST00000472697 HSPA1BP0DMV9 641 aaKnown RBP2.84□□□□□ -1.96
XRN1-210ENST00000472697 PCP11498 1178 aaKnown RBP2.84□□□□□ -1.96
XRN1-210ENST00000472697 IFNAR1P17181 557 aa2.84□□□□□ -1.96
XRN1-210ENST00000472697 GATA3P23771 443 aa2.84□□□□□ -1.96
XRN1-210ENST00000472697 MGAT1P26572 445 aa2.84□□□□□ -1.96
XRN1-210ENST00000472697 MCM5P33992 734 aa2.84□□□□□ -1.96
XRN1-210ENST00000472697 MAPKAPK2P49137 400 aa2.84□□□□□ -1.96
XRN1-210ENST00000472697 GZMKP49863 264 aa2.84□□□□□ -1.96
XRN1-210ENST00000472697 RAE1P78406 368 aaKnown RBP2.84□□□□□ -1.96
XRN1-210ENST00000472697 MRPS5P82675 430 aaKnown RBP2.84□□□□□ -1.96
XRN1-210ENST00000472697 B4GALNT1Q00973 533 aa2.84□□□□□ -1.96
XRN1-210ENST00000472697 PRPF4BQ13523 1007 aaKnown RBP2.84□□□□□ -1.96
XRN1-210ENST00000472697 CAMK1Q14012 370 aa2.84□□□□□ -1.96
XRN1-210ENST00000472697 SEMA3AQ14563 771 aa2.84□□□□□ -1.96
XRN1-210ENST00000472697 NFIXQ14938 502 aa2.84□□□□□ -1.96
XRN1-210ENST00000472697 SLMAPQ14BN4 828 aa2.84□□□□□ -1.96
XRN1-210ENST00000472697 SUPT20HL1Q3ZLR7 823 aa2.84□□□□□ -1.96
XRN1-210ENST00000472697 PRSS36Q5K4E3 855 aa2.84□□□□□ -1.96
XRN1-210ENST00000472697 AGBL4Q5VU57 503 aa2.84□□□□□ -1.96
XRN1-210ENST00000472697 FAM90A2PQ658T7 463 aa2.84□□□□□ -1.96
XRN1-210ENST00000472697 MTHFD1LQ6UB35 978 aa2.84□□□□□ -1.96
XRN1-210ENST00000472697 BTN2A1Q7KYR7 527 aa2.84□□□□□ -1.96
XRN1-210ENST00000472697 MAVSQ7Z434 540 aa2.84□□□□□ -1.96
XRN1-210ENST00000472697 TDRPQ86YL5 185 aa2.84□□□□□ -1.96
XRN1-210ENST00000472697 LRRC71Q8N4P6 559 aa2.84□□□□□ -1.96
XRN1-210ENST00000472697 POC5Q8NA72 575 aa2.84□□□□□ -1.96
XRN1-210ENST00000472697 SYTL4Q96C24 671 aaPredicted RBP2.84□□□□□ -1.96
XRN1-210ENST00000472697 INTS4Q96HW7 963 aaKnown RBP2.84□□□□□ -1.96
XRN1-210ENST00000472697 REXO5Q96IC2 774 aaKnown RBP2.84□□□□□ -1.96
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms