RNA–Protein interactions for RNA: ENST00000472282.5

SMC4-213, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 3

Gene SMC4, Length 667 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-213ENST00000472282 WDR59Q6PJI9 974 aa9.5□□□□□ -0.89
SMC4-213ENST00000472282 TPGS1Q6ZTW0 290 aa9.5□□□□□ -0.89
SMC4-213ENST00000472282 TOGARAM2Q6ZUX3 1019 aa9.5□□□□□ -0.89
SMC4-213ENST00000472282 HTR3DQ70Z44 454 aa9.5□□□□□ -0.89
SMC4-213ENST00000472282 PRICKLE2Q7Z3G6 844 aa9.5□□□□□ -0.89
SMC4-213ENST00000472282 TADA2BQ86TJ2 420 aa9.5□□□□□ -0.89
SMC4-213ENST00000472282 XYLT1Q86Y38 959 aa9.5□□□□□ -0.89
SMC4-213ENST00000472282 PHF13Q86YI8 300 aaPredicted RBP9.5□□□□□ -0.89
SMC4-213ENST00000472282 MIB1Q86YT6 1006 aa9.5□□□□□ -0.89
SMC4-213ENST00000472282 CNGA4Q8IV77 575 aa9.5□□□□□ -0.89
SMC4-213ENST00000472282 DRC7Q8IY82 874 aa9.5□□□□□ -0.89
SMC4-213ENST00000472282 ZNF276Q8N554 614 aa9.5□□□□□ -0.89
SMC4-213ENST00000472282 KDF1Q8NAX2 398 aaPredicted RBP9.5□□□□□ -0.89
SMC4-213ENST00000472282 OR8K1Q8NGG5 319 aa9.5□□□□□ -0.89
SMC4-213ENST00000472282 NETO1Q8TDF5 533 aa9.5□□□□□ -0.89
SMC4-213ENST00000472282 RNF139Q8WU17 664 aa9.5□□□□□ -0.89
SMC4-213ENST00000472282 RLN3Q8WXF3 142 aa9.5□□□□□ -0.89
SMC4-213ENST00000472282 GOLGA1Q92805 767 aa9.5□□□□□ -0.89
SMC4-213ENST00000472282 OTUB2Q96DC9 234 aa9.5□□□□□ -0.89
SMC4-213ENST00000472282 ERLEC1Q96DZ1 483 aa9.5□□□□□ -0.89
SMC4-213ENST00000472282 LOXL4Q96JB6 756 aa9.5□□□□□ -0.89
SMC4-213ENST00000472282 CDK5RAP1Q96SZ6 601 aaKnown RBP9.5□□□□□ -0.89
SMC4-213ENST00000472282 ACOX2Q99424 681 aa9.5□□□□□ -0.89
SMC4-213ENST00000472282 RTKNQ9BST9 563 aa9.5□□□□□ -0.89
SMC4-213ENST00000472282 OLA1Q9NTK5 396 aaKnown RBP9.5□□□□□ -0.89
SMC4-213ENST00000472282 TAS2R14Q9NYV8 317 aa9.5□□□□□ -0.89
SMC4-213ENST00000472282 ARHGAP20Q9P2F6 1191 aa9.5□□□□□ -0.89
SMC4-213ENST00000472282 BZW2Q9Y6E2 419 aaKnown RBP9.5□□□□□ -0.89
SMC4-213ENST00000472282 DNMT3AQ9Y6K1 912 aaPredicted RBP9.5□□□□□ -0.89
SMC4-213ENST00000472282 TP53BP1Q12888 1972 aaPredicted RBP9.5□□□□□ -0.89
SMC4-213ENST00000472282 GOLGA6L3A6NEY3 463 aa9.49□□□□□ -0.89
SMC4-213ENST00000472282 KRTAP9-1A8MXZ3 250 aaPredicted RBP9.49□□□□□ -0.89
SMC4-213ENST00000472282 NEDD8-MDP1E9PL57 170 aa9.49□□□□□ -0.89
SMC4-213ENST00000472282 HSF2BPO75031 334 aa9.49□□□□□ -0.89
SMC4-213ENST00000472282 DAB1O75553 588 aa9.49□□□□□ -0.89
SMC4-213ENST00000472282 STC2O76061 302 aa9.49□□□□□ -0.89
SMC4-213ENST00000472282 KLKB1P03952 638 aa9.49□□□□□ -0.89
SMC4-213ENST00000472282 FYNP06241 537 aa9.49□□□□□ -0.89
SMC4-213ENST00000472282 ZNF806P0C7X5 589 aa9.49□□□□□ -0.89
SMC4-213ENST00000472282 NCAM1P13591 858 aa9.49□□□□□ -0.89
SMC4-213ENST00000472282 MMP8P22894 467 aa9.49□□□□□ -0.89
SMC4-213ENST00000472282 CDC25BP30305 580 aa9.49□□□□□ -0.89
SMC4-213ENST00000472282 GBP1P32455 592 aa9.49□□□□□ -0.89
SMC4-213ENST00000472282 EIF4A3P38919 411 aaKnown RBP9.49□□□□□ -0.89
SMC4-213ENST00000472282 GRIA2P42262 883 aa9.49□□□□□ -0.89
SMC4-213ENST00000472282 WASP42768 502 aa9.49□□□□□ -0.89
SMC4-213ENST00000472282 YWHAZP63104 245 aaKnown RBP9.49□□□□□ -0.89
SMC4-213ENST00000472282 SLC6A3Q01959 620 aa9.49□□□□□ -0.89
SMC4-213ENST00000472282 PTP4A2Q12974 167 aa9.49□□□□□ -0.89
SMC4-213ENST00000472282 TAF5Q15542 800 aa9.49□□□□□ -0.89
SMC4-213ENST00000472282 EFHC1Q5JVL4 640 aa9.49□□□□□ -0.89
SMC4-213ENST00000472282 C10orf76Q5T2E6 689 aa9.49□□□□□ -0.89
SMC4-213ENST00000472282 FAM102AQ5T9C2 384 aaPredicted RBP9.49□□□□□ -0.89
SMC4-213ENST00000472282 EGFLAMQ63HQ2 1017 aa9.49□□□□□ -0.89
SMC4-213ENST00000472282 PMS2CLQ68D20 193 aa9.49□□□□□ -0.89
SMC4-213ENST00000472282 ACAD10Q6JQN1 1059 aa9.49□□□□□ -0.89
SMC4-213ENST00000472282 MSANTD2Q6P1R3 559 aa9.49□□□□□ -0.89
SMC4-213ENST00000472282 KLHDC10Q6PID8 442 aa9.49□□□□□ -0.89
SMC4-213ENST00000472282 MON1BQ7L1V2 547 aa9.49□□□□□ -0.89
SMC4-213ENST00000472282 SLC26A9Q7LBE3 791 aa9.49□□□□□ -0.89
SMC4-213ENST00000472282 PHLDB2Q86SQ0 1253 aa9.49□□□□□ -0.89
SMC4-213ENST00000472282 VPS36Q86VN1 386 aa9.49□□□□□ -0.89
SMC4-213ENST00000472282 DNAAF5Q86Y56 855 aa9.49□□□□□ -0.89
SMC4-213ENST00000472282 ZDHHC17Q8IUH5 632 aa9.49□□□□□ -0.89
SMC4-213ENST00000472282 TC2NQ8N9U0 490 aa9.49□□□□□ -0.89
SMC4-213ENST00000472282 TERB1Q8NA31 727 aa9.49□□□□□ -0.89
SMC4-213ENST00000472282 SPC24Q8NBT2 197 aa9.49□□□□□ -0.89
SMC4-213ENST00000472282 BHMTQ93088 406 aa9.49□□□□□ -0.89
SMC4-213ENST00000472282 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP9.49□□□□□ -0.897e-7■■□□□ 12.7
SMC4-213ENST00000472282 BBS2Q9BXC9 721 aa9.49□□□□□ -0.89
SMC4-213ENST00000472282 GRPEL1Q9HAV7 217 aa9.49□□□□□ -0.89
SMC4-213ENST00000472282 POPDC2Q9HBU9 364 aa9.49□□□□□ -0.89
SMC4-213ENST00000472282 METTL5Q9NRN9 209 aaKnown RBP9.49□□□□□ -0.89
SMC4-213ENST00000472282 ZNHIT6Q9NWK9 470 aaKnown RBP9.49□□□□□ -0.89
SMC4-213ENST00000472282 ASNSD1Q9NWL6 643 aa9.49□□□□□ -0.89
SMC4-213ENST00000472282 PLK2Q9NYY3 685 aa9.49□□□□□ -0.89
SMC4-213ENST00000472282 ADAM22Q9P0K1 906 aa9.49□□□□□ -0.89
SMC4-213ENST00000472282 MARCH2Q9P0N8 246 aa9.49□□□□□ -0.89
SMC4-213ENST00000472282 ADAMTS1Q9UHI8 967 aa9.49□□□□□ -0.89
SMC4-213ENST00000472282 SFMBT1Q9UHJ3 866 aa9.49□□□□□ -0.89
SMC4-213ENST00000472282 NAALADL1Q9UQQ1 740 aa9.49□□□□□ -0.89
SMC4-213ENST00000472282 PCDH15Q96QU1 1955 aa9.49□□□□□ -0.89
SMC4-213ENST00000472282 TCRBV21S2A2A0A5A6 115 aa9.48□□□□□ -0.89
SMC4-213ENST00000472282 SLC12A8A0AV02 714 aa9.48□□□□□ -0.89
SMC4-213ENST00000472282 TBC1D3BA6NDS4 549 aa9.48□□□□□ -0.89
SMC4-213ENST00000472282 PATE3B3GLJ2 98 aa9.48□□□□□ -0.89
SMC4-213ENST00000472282 PRRT4C9JH25 899 aa9.48□□□□□ -0.89
SMC4-213ENST00000472282 CAPN9O14815 690 aa9.48□□□□□ -0.89
SMC4-213ENST00000472282 TM4SF5O14894 197 aa9.48□□□□□ -0.89
SMC4-213ENST00000472282 MSI1O43347 362 aaKnown RBP9.48□□□□□ -0.89
SMC4-213ENST00000472282 CACNG3O60359 315 aa9.48□□□□□ -0.89
SMC4-213ENST00000472282 GJB6O95452 261 aa9.48□□□□□ -0.89
SMC4-213ENST00000472282 IGHA1P01876 353 aa9.48□□□□□ -0.89
SMC4-213ENST00000472282 CALB1P05937 261 aa9.48□□□□□ -0.89
SMC4-213ENST00000472282 GLI1P08151 1106 aa9.48□□□□□ -0.89
SMC4-213ENST00000472282 HMBSP08397 361 aa9.48□□□□□ -0.89
SMC4-213ENST00000472282 TYRP14679 529 aa9.48□□□□□ -0.89
SMC4-213ENST00000472282 SCNN1AP37088 669 aa9.48□□□□□ -0.89
SMC4-213ENST00000472282 TNFRSF4P43489 277 aa9.48□□□□□ -0.89
SMC4-213ENST00000472282 RNASE9P60153 205 aaKnown RBP9.48□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms