RNA–Protein interactions for RNA: ENST00000472147.1

ITGB1-209, Transcript of integrin subunit beta 1, humanhuman

TSL 3

Gene ITGB1, Length 668 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB1-209ENST00000472147 LARP4BQ92615 738 aaKnown RBP6.12□□□□□ -1.43
ITGB1-209ENST00000472147 IGSF8Q969P0 613 aa6.12□□□□□ -1.43
ITGB1-209ENST00000472147 FBXO32Q969P5 355 aa6.12□□□□□ -1.43
ITGB1-209ENST00000472147 MRRFQ96E11 262 aaKnown RBP6.12□□□□□ -1.43
ITGB1-209ENST00000472147 B3GNT5Q9BYG0 378 aa6.12□□□□□ -1.43
ITGB1-209ENST00000472147 KRTAP4-7Q9BYR0 210 aa6.12□□□□□ -1.43
ITGB1-209ENST00000472147 NACA2Q9H009 215 aa6.12□□□□□ -1.43
ITGB1-209ENST00000472147 IL21RQ9HBE5 538 aa6.12□□□□□ -1.43
ITGB1-209ENST00000472147 OLFML3Q9NRN5 406 aa6.12□□□□□ -1.43
ITGB1-209ENST00000472147 ELOVL2Q9NXB9 296 aa6.12□□□□□ -1.43
ITGB1-209ENST00000472147 THAP10Q9P2Z0 257 aaPredicted RBP6.12□□□□□ -1.43
ITGB1-209ENST00000472147 EIF2B4Q9UI10 523 aaKnown RBP6.12□□□□□ -1.43
ITGB1-209ENST00000472147 LSM7Q9UK45 103 aaKnown RBP6.12□□□□□ -1.43
ITGB1-209ENST00000472147 PLA2G4CQ9UP65 541 aa6.12□□□□□ -1.43
ITGB1-209ENST00000472147 ANKRD6Q9Y2G4 727 aa6.12□□□□□ -1.43
ITGB1-209ENST00000472147 STON1Q9Y6Q2 735 aa6.12□□□□□ -1.43
ITGB1-209ENST00000472147 TEX15Q9BXT5 2789 aa6.12□□□□□ -1.43
ITGB1-209ENST00000472147 UNC79Q9P2D8 2635 aa6.12□□□□□ -1.43
ITGB1-209ENST00000472147 ATP8B3O60423 1300 aa6.11□□□□□ -1.43
ITGB1-209ENST00000472147 A0A1B0GVT2 93 aa6.11□□□□□ -1.43
ITGB1-209ENST00000472147 A8MXQ7 604 aa6.11□□□□□ -1.43
ITGB1-209ENST00000472147 KCNJ18B7U540 433 aa6.11□□□□□ -1.43
ITGB1-209ENST00000472147 NEDD8-MDP1E9PL57 170 aa6.11□□□□□ -1.43
ITGB1-209ENST00000472147 TSPAN3O60637 253 aa6.11□□□□□ -1.43
ITGB1-209ENST00000472147 C1QL1O75973 258 aa6.11□□□□□ -1.43
ITGB1-209ENST00000472147 CD27P26842 260 aa6.11□□□□□ -1.43
ITGB1-209ENST00000472147 ITPKBP27987 946 aa6.11□□□□□ -1.43
ITGB1-209ENST00000472147 PSMC1P62191 440 aaKnown RBP6.11□□□□□ -1.43
ITGB1-209ENST00000472147 SNRPFP62306 86 aaKnown RBP6.11□□□□□ -1.43
ITGB1-209ENST00000472147 BNC1Q01954 994 aa6.11□□□□□ -1.43
ITGB1-209ENST00000472147 CFHR1Q03591 330 aa6.11□□□□□ -1.43
ITGB1-209ENST00000472147 ST3GAL1Q11201 340 aa6.11□□□□□ -1.43
ITGB1-209ENST00000472147 EIF4HQ15056 248 aaKnown RBP6.11□□□□□ -1.43
ITGB1-209ENST00000472147 WDR72Q3MJ13 1102 aa6.11□□□□□ -1.43
ITGB1-209ENST00000472147 MDH1BQ5I0G3 518 aa6.11□□□□□ -1.43
ITGB1-209ENST00000472147 EXOSC6Q5RKV6 272 aaKnown RBP6.11□□□□□ -1.43
ITGB1-209ENST00000472147 SCARA3Q6AZY7 606 aa6.11□□□□□ -1.43
ITGB1-209ENST00000472147 MCTP1Q6DN14 999 aa6.11□□□□□ -1.43
ITGB1-209ENST00000472147 KIAA1324Q6UXG2 1013 aaKnown RBP6.11□□□□□ -1.43
ITGB1-209ENST00000472147 ACAD11Q709F0 780 aa6.11□□□□□ -1.43
ITGB1-209ENST00000472147 DYMQ7RTS9 669 aa6.11□□□□□ -1.43
ITGB1-209ENST00000472147 TADA2BQ86TJ2 420 aa6.11□□□□□ -1.43
ITGB1-209ENST00000472147 WDR49Q8IV35 697 aa6.11□□□□□ -1.43
ITGB1-209ENST00000472147 SULF2Q8IWU5 870 aa6.11□□□□□ -1.43
ITGB1-209ENST00000472147 CRYBG2Q8N1P7 616 aa6.11□□□□□ -1.43
ITGB1-209ENST00000472147 AGGF1Q8N302 714 aaeCLIP6.11□□□□□ -1.43
ITGB1-209ENST00000472147 GPD1LQ8N335 351 aa6.11□□□□□ -1.43
ITGB1-209ENST00000472147 ZCCHC9Q8N567 271 aaKnown RBP6.11□□□□□ -1.43
ITGB1-209ENST00000472147 SCAMP5Q8TAC9 235 aa6.11□□□□□ -1.43
ITGB1-209ENST00000472147 NXPE2Q96DL1 559 aa6.11□□□□□ -1.43
ITGB1-209ENST00000472147 TNIP3Q96KP6 325 aa6.11□□□□□ -1.43
ITGB1-209ENST00000472147 KCNK16Q96T55 309 aa6.11□□□□□ -1.43
ITGB1-209ENST00000472147 TMPRSS13Q9BYE2 586 aa6.11□□□□□ -1.43
ITGB1-209ENST00000472147 SLC2A11Q9BYW1 496 aa6.11□□□□□ -1.43
ITGB1-209ENST00000472147 DCLK3Q9C098 648 aa6.11□□□□□ -1.43
ITGB1-209ENST00000472147 MKRN2Q9H000 416 aaKnown RBP6.11□□□□□ -1.43
ITGB1-209ENST00000472147 CCSER2Q9H7U1 834 aa6.11□□□□□ -1.43
ITGB1-209ENST00000472147 AKTIPQ9H8T0 292 aa6.11□□□□□ -1.43
ITGB1-209ENST00000472147 TLR8Q9NR97 1041 aaKnown RBP6.11□□□□□ -1.43
ITGB1-209ENST00000472147 CCDC39Q9UFE4 941 aa6.11□□□□□ -1.43
ITGB1-209ENST00000472147 WDR3Q9UNX4 943 aaKnown RBP eCLIP6.11□□□□□ -1.43
ITGB1-209ENST00000472147 SNX11Q9Y5W9 270 aa6.11□□□□□ -1.43
ITGB1-209ENST00000472147 FLNCQ14315 2725 aa6.1□□□□□ -1.43
ITGB1-209ENST00000472147 SCN1AP35498 2009 aa6.1□□□□□ -1.43
ITGB1-209ENST00000472147 FAM149AA5PLN7 773 aa6.1□□□□□ -1.43
ITGB1-209ENST00000472147 GOLGA8IPA6NC78 632 aa6.1□□□□□ -1.43
ITGB1-209ENST00000472147 GOLGA8JA6NMD2 632 aa6.1□□□□□ -1.43
ITGB1-209ENST00000472147 SCAMP3O14828 347 aaKnown RBP6.1□□□□□ -1.43
ITGB1-209ENST00000472147 VILLO15195 856 aa6.1□□□□□ -1.43
ITGB1-209ENST00000472147 HCRTO43612 131 aa6.1□□□□□ -1.43
ITGB1-209ENST00000472147 TLR5O60602 858 aa6.1□□□□□ -1.43
ITGB1-209ENST00000472147 GCNT3O95395 438 aa6.1□□□□□ -1.43
ITGB1-209ENST00000472147 LDOC1O95751 146 aaPredicted RBP6.1□□□□□ -1.43
ITGB1-209ENST00000472147 TBX18O95935 607 aa6.1□□□□□ -1.43
ITGB1-209ENST00000472147 RECKO95980 971 aa6.1□□□□□ -1.43
ITGB1-209ENST00000472147 PENKP01210 267 aaPredicted RBP6.1□□□□□ -1.43
ITGB1-209ENST00000472147 PRB1P04280 392 aa6.1□□□□□ -1.43
ITGB1-209ENST00000472147 GSTP1P09211 210 aaKnown RBP6.1□□□□□ -1.43
ITGB1-209ENST00000472147 ACTN2P35609 894 aa6.1□□□□□ -1.43
ITGB1-209ENST00000472147 CDH8P55286 799 aa6.1□□□□□ -1.43
ITGB1-209ENST00000472147 RACK1P63244 317 aaKnown RBP6.1□□□□□ -1.43
ITGB1-209ENST00000472147 TNNC1P63316 161 aa6.1□□□□□ -1.43
ITGB1-209ENST00000472147 COG7P83436 770 aa6.1□□□□□ -1.43
ITGB1-209ENST00000472147 RHDQ02161 417 aa6.1□□□□□ -1.43
ITGB1-209ENST00000472147 SEMG2Q02383 582 aa6.1□□□□□ -1.43
ITGB1-209ENST00000472147 TARDBPQ13148 414 aaKnown RBP eCLIP6.1□□□□□ -1.43
ITGB1-209ENST00000472147 CCDC142Q17RM4 750 aa6.1□□□□□ -1.43
ITGB1-209ENST00000472147 BMT2Q1RMZ1 405 aa6.1□□□□□ -1.43
ITGB1-209ENST00000472147 LARP1BQ659C4 914 aaKnown RBP6.1□□□□□ -1.43
ITGB1-209ENST00000472147 DHRS13Q6UX07 377 aa6.1□□□□□ -1.43
ITGB1-209ENST00000472147 TPGS1Q6ZTW0 290 aa6.1□□□□□ -1.43
ITGB1-209ENST00000472147 PAQR9Q6ZVX9 377 aa6.1□□□□□ -1.43
ITGB1-209ENST00000472147 STXBP4Q6ZWJ1 553 aa6.1□□□□□ -1.43
ITGB1-209ENST00000472147 LSMEM2Q8N112 164 aa6.1□□□□□ -1.43
ITGB1-209ENST00000472147 B3GALNT2Q8NCR0 500 aa6.1□□□□□ -1.43
ITGB1-209ENST00000472147 OR5B17Q8NGF7 314 aa6.1□□□□□ -1.43
ITGB1-209ENST00000472147 RASSF8Q8NHQ8 419 aa6.1□□□□□ -1.43
ITGB1-209ENST00000472147 PIP4K2CQ8TBX8 421 aa6.1□□□□□ -1.43
ITGB1-209ENST00000472147 GRIN3AQ8TCU5 1115 aa6.1□□□□□ -1.43
ITGB1-209ENST00000472147 SYAP1Q96A49 352 aaPredicted RBP6.1□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms