RNA–Protein interactions for RNA: ENST00000471246.1

UBXN4-207, Transcript of UBX domain protein 4, humanhuman

TSL 3

Gene UBXN4, Length 395 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBXN4-207ENST00000471246 NTSR2O95665 410 aa1.62□□□□□ -2.15
UBXN4-207ENST00000471246 IFNA2P01563 188 aa1.62□□□□□ -2.15
UBXN4-207ENST00000471246 NGFRP08138 427 aa1.62□□□□□ -2.15
UBXN4-207ENST00000471246 PLA2G2AP14555 144 aa1.62□□□□□ -2.15
UBXN4-207ENST00000471246 HOXA11P31270 313 aaPredicted RBP1.62□□□□□ -2.15
UBXN4-207ENST00000471246 ARRB2P32121 409 aa1.62□□□□□ -2.15
UBXN4-207ENST00000471246 GRK5P34947 590 aa1.62□□□□□ -2.15
UBXN4-207ENST00000471246 TBX4P57082 545 aa1.62□□□□□ -2.15
UBXN4-207ENST00000471246 FOXL2P58012 376 aa1.62□□□□□ -2.15
UBXN4-207ENST00000471246 RPL15P61313 204 aaKnown RBP1.62□□□□□ -2.15
UBXN4-207ENST00000471246 SF3A3Q12874 501 aaKnown RBP eCLIP1.62□□□□□ -2.151e-9■■■■■ 34.6
UBXN4-207ENST00000471246 PICALMQ13492 652 aa1.62□□□□□ -2.15
UBXN4-207ENST00000471246 GALNT3Q14435 633 aa1.62□□□□□ -2.15
UBXN4-207ENST00000471246 BTBD16Q32M84 506 aa1.62□□□□□ -2.15
UBXN4-207ENST00000471246 ZNF585BQ52M93 769 aa1.62□□□□□ -2.15
UBXN4-207ENST00000471246 HSP90AB2PQ58FF8 381 aa1.62□□□□□ -2.15
UBXN4-207ENST00000471246 ALG10Q5BKT4 473 aa1.62□□□□□ -2.15
UBXN4-207ENST00000471246 ALG10BQ5I7T1 473 aa1.62□□□□□ -2.15
UBXN4-207ENST00000471246 ENTPD8Q5MY95 495 aa1.62□□□□□ -2.15
UBXN4-207ENST00000471246 TTC39AQ5SRH9 613 aa1.62□□□□□ -2.15
UBXN4-207ENST00000471246 UBAP2Q5T6F2 1119 aaKnown RBP1.62□□□□□ -2.15
UBXN4-207ENST00000471246 IL31Q6EBC2 164 aa1.62□□□□□ -2.15
UBXN4-207ENST00000471246 HMBOX1Q6NT76 420 aa1.62□□□□□ -2.15
UBXN4-207ENST00000471246 RINT1Q6NUQ1 792 aa1.62□□□□□ -2.15
UBXN4-207ENST00000471246 TMEM88Q6PEY1 159 aa1.62□□□□□ -2.15
UBXN4-207ENST00000471246 KDELC2Q7Z4H8 507 aa1.62□□□□□ -2.15
UBXN4-207ENST00000471246 GATAD2AQ86YP4 633 aa1.62□□□□□ -2.15
UBXN4-207ENST00000471246 GPSM1Q86YR5 675 aa1.62□□□□□ -2.15
UBXN4-207ENST00000471246 FBXL14Q8N1E6 418 aa1.62□□□□□ -2.15
UBXN4-207ENST00000471246 DEPTORQ8TB45 409 aa1.62□□□□□ -2.15
UBXN4-207ENST00000471246 WDR60Q8WVS4 1066 aa1.62□□□□□ -2.15
UBXN4-207ENST00000471246 CENPIQ92674 756 aaPredicted RBP1.62□□□□□ -2.15
UBXN4-207ENST00000471246 INPP5DQ92835 1189 aa1.62□□□□□ -2.15
UBXN4-207ENST00000471246 ATP2A3Q93084 1043 aa1.62□□□□□ -2.15
UBXN4-207ENST00000471246 MIB2Q96AX9 1013 aa1.62□□□□□ -2.15
UBXN4-207ENST00000471246 ZNF419Q96HQ0 510 aaPredicted RBP1.62□□□□□ -2.15
UBXN4-207ENST00000471246 SGCZQ96LD1 299 aa1.62□□□□□ -2.15
UBXN4-207ENST00000471246 PRPF18Q99633 342 aaKnown RBP1.62□□□□□ -2.15
UBXN4-207ENST00000471246 TMEM204Q9BSN7 226 aa1.62□□□□□ -2.15
UBXN4-207ENST00000471246 MECRQ9BV79 373 aa1.62□□□□□ -2.15
UBXN4-207ENST00000471246 TP63Q9H3D4 680 aaPredicted RBP1.62□□□□□ -2.15
UBXN4-207ENST00000471246 CCDC134Q9H6E4 229 aa1.62□□□□□ -2.15
UBXN4-207ENST00000471246 TASP1Q9H6P5 420 aa1.62□□□□□ -2.15
UBXN4-207ENST00000471246 SFXN1Q9H9B4 322 aa1.62□□□□□ -2.15
UBXN4-207ENST00000471246 MAP6D1Q9H9H5 199 aa1.62□□□□□ -2.15
UBXN4-207ENST00000471246 IL21RQ9HBE5 538 aa1.62□□□□□ -2.15
UBXN4-207ENST00000471246 TXNRD2Q9NNW7 524 aa1.62□□□□□ -2.15
UBXN4-207ENST00000471246 WWOXQ9NZC7 414 aa1.62□□□□□ -2.15
UBXN4-207ENST00000471246 ZNF112Q9UJU3 913 aa1.62□□□□□ -2.15
UBXN4-207ENST00000471246 FBXO4Q9UKT5 387 aa1.62□□□□□ -2.15
UBXN4-207ENST00000471246 NFU1Q9UMS0 254 aa1.62□□□□□ -2.15
UBXN4-207ENST00000471246 PROCRQ9UNN8 238 aa1.62□□□□□ -2.15
UBXN4-207ENST00000471246 ZBTB1Q9Y2K1 713 aa1.62□□□□□ -2.15
UBXN4-207ENST00000471246 INSL5Q9Y5Q6 135 aa1.62□□□□□ -2.15
UBXN4-207ENST00000471246 CYP3A7-CYP3A51PA0A087WV96 503 aa1.61□□□□□ -2.15
UBXN4-207ENST00000471246 TBC1D3DA0A087WVF3 549 aa1.61□□□□□ -2.15
UBXN4-207ENST00000471246 TBC1D3IA0A087WXS9 549 aa1.61□□□□□ -2.15
UBXN4-207ENST00000471246 TBC1D3EA0A087X179 549 aa1.61□□□□□ -2.15
UBXN4-207ENST00000471246 TBC1D3KA0A087X1G2 549 aa1.61□□□□□ -2.15
UBXN4-207ENST00000471246 RPS10-NUDT3A0A1W2PQS6 291 aa1.61□□□□□ -2.15
UBXN4-207ENST00000471246 TBC1D3BA6NDS4 549 aa1.61□□□□□ -2.15
UBXN4-207ENST00000471246 FAM90A18PA6NE21 464 aa1.61□□□□□ -2.15
UBXN4-207ENST00000471246 TBC1D3FA6NER0 549 aaPredicted RBP1.61□□□□□ -2.15
UBXN4-207ENST00000471246 FAM90A16PA6NEW6 464 aa1.61□□□□□ -2.15
UBXN4-207ENST00000471246 MBD3L5A6NJ08 208 aaPredicted RBP1.61□□□□□ -2.15
UBXN4-207ENST00000471246 FAM90A9PA6NNJ1 464 aa1.61□□□□□ -2.15
UBXN4-207ENST00000471246 C4orf47A7E2U8 309 aa1.61□□□□□ -2.15
UBXN4-207ENST00000471246 FAM90A5PA8MXJ8 464 aa1.61□□□□□ -2.15
UBXN4-207ENST00000471246 TBC1D3LB9A6J9 549 aa1.61□□□□□ -2.15
UBXN4-207ENST00000471246 MCIDASD6RGH6 385 aa1.61□□□□□ -2.15
UBXN4-207ENST00000471246 DNPH1O43598 174 aa1.61□□□□□ -2.15
UBXN4-207ENST00000471246 PRC1O43663 620 aa1.61□□□□□ -2.15
UBXN4-207ENST00000471246 CAND2O75155 1236 aa1.61□□□□□ -2.15
UBXN4-207ENST00000471246 TNFRSF6BO95407 300 aa1.61□□□□□ -2.15
UBXN4-207ENST00000471246 KRT18P05783 430 aaKnown RBP1.61□□□□□ -2.15
UBXN4-207ENST00000471246 MYL1P05976 194 aa1.61□□□□□ -2.15
UBXN4-207ENST00000471246 CYP3A4P08684 503 aa1.61□□□□□ -2.15
UBXN4-207ENST00000471246 FAM90A15PP0C7V4 464 aa1.61□□□□□ -2.15
UBXN4-207ENST00000471246 FAM90A14PP0C7W9 464 aa1.61□□□□□ -2.15
UBXN4-207ENST00000471246 TBC1D3HP0C7X1 549 aa1.61□□□□□ -2.15
UBXN4-207ENST00000471246 CYP3A7P24462 503 aa1.61□□□□□ -2.15
UBXN4-207ENST00000471246 ZXDBP98169 803 aa1.61□□□□□ -2.15
UBXN4-207ENST00000471246 PMPCAQ10713 525 aa1.61□□□□□ -2.15
UBXN4-207ENST00000471246 STARD3Q14849 445 aa1.61□□□□□ -2.15
UBXN4-207ENST00000471246 KRT71Q3SY84 523 aa1.61□□□□□ -2.15
UBXN4-207ENST00000471246 C10orf76Q5T2E6 689 aa1.61□□□□□ -2.15
UBXN4-207ENST00000471246 LCE3AQ5TA76 89 aa1.61□□□□□ -2.15
UBXN4-207ENST00000471246 CCDC181Q5TID7 509 aa1.61□□□□□ -2.15
UBXN4-207ENST00000471246 TBC1D3GQ6DHY5 549 aa1.61□□□□□ -2.15
UBXN4-207ENST00000471246 TBC1D3CQ6IPX1 549 aa1.61□□□□□ -2.15
UBXN4-207ENST00000471246 XRRA1Q6P2D8 792 aa1.61□□□□□ -2.15
UBXN4-207ENST00000471246 PARM1Q6UWI2 310 aa1.61□□□□□ -2.15
UBXN4-207ENST00000471246 Q6ZTC4 211 aa1.61□□□□□ -2.15
UBXN4-207ENST00000471246 SRLQ86TD4 932 aa1.61□□□□□ -2.15
UBXN4-207ENST00000471246 CCDC25Q86WR0 208 aa1.61□□□□□ -2.15
UBXN4-207ENST00000471246 ADHFE1Q8IWW8 467 aa1.61□□□□□ -2.15
UBXN4-207ENST00000471246 NRSN1Q8IZ57 195 aa1.61□□□□□ -2.15
UBXN4-207ENST00000471246 TBC1D3Q8IZP1 549 aaPredicted RBP1.61□□□□□ -2.15
UBXN4-207ENST00000471246 C7orf57Q8NEG2 295 aa1.61□□□□□ -2.15
UBXN4-207ENST00000471246 FAM71BQ8TC56 605 aa1.61□□□□□ -2.15
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms