RNA–Protein interactions for RNA: ENST00000471245.1

CKS1B-204, Transcript of CDC28 protein kinase regulatory subunit 1B, humanhuman

TSL 1 (best)

Gene CKS1B, Length 1,166 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKS1B-204ENST00000471245 CER1O95813 267 aa6.3□□□□□ -1.4
CKS1B-204ENST00000471245 ONECUT2O95948 504 aa6.3□□□□□ -1.4
CKS1B-204ENST00000471245 PEX11BO96011 259 aa6.3□□□□□ -1.4
CKS1B-204ENST00000471245 XBP1P17861 261 aa6.3□□□□□ -1.4
CKS1B-204ENST00000471245 LIPAP38571 399 aa6.3□□□□□ -1.4
CKS1B-204ENST00000471245 SLC25A3Q00325 362 aa6.3□□□□□ -1.4
CKS1B-204ENST00000471245 GUCY1B3Q02153 619 aa6.3□□□□□ -1.4
CKS1B-204ENST00000471245 SF3A3Q12874 501 aaKnown RBP eCLIP6.3□□□□□ -1.43e-6■□□□□ 9.9
CKS1B-204ENST00000471245 TRPC3Q13507 836 aa6.3□□□□□ -1.4
CKS1B-204ENST00000471245 RPS6KA2Q15349 733 aa6.3□□□□□ -1.4
CKS1B-204ENST00000471245 TMEM196Q5HYL7 178 aa6.3□□□□□ -1.4
CKS1B-204ENST00000471245 FAM90A2PQ658T7 463 aa6.3□□□□□ -1.4
CKS1B-204ENST00000471245 DGAT2L7PQ6IED9 249 aa6.3□□□□□ -1.4
CKS1B-204ENST00000471245 VWA1Q6PCB0 445 aa6.3□□□□□ -1.4
CKS1B-204ENST00000471245 RRAGAQ7L523 313 aa6.3□□□□□ -1.4
CKS1B-204ENST00000471245 MAVSQ7Z434 540 aa6.3□□□□□ -1.4
CKS1B-204ENST00000471245 CAND1Q86VP6 1230 aaKnown RBP6.3□□□□□ -1.4
CKS1B-204ENST00000471245 DDX51Q8N8A6 666 aaKnown RBP eCLIP6.3□□□□□ -1.4
CKS1B-204ENST00000471245 C11orf44Q8N8P7 122 aa6.3□□□□□ -1.4
CKS1B-204ENST00000471245 FKBP10Q96AY3 582 aa6.3□□□□□ -1.4
CKS1B-204ENST00000471245 PTCD3Q96EY7 689 aaKnown RBP6.3□□□□□ -1.4
CKS1B-204ENST00000471245 PGBD1Q96JS3 809 aa6.3□□□□□ -1.4
CKS1B-204ENST00000471245 MAELQ96JY0 434 aaKnown RBP6.3□□□□□ -1.4
CKS1B-204ENST00000471245 COG8Q96MW5 612 aa6.3□□□□□ -1.4
CKS1B-204ENST00000471245 TWNKQ96RR1 684 aa6.3□□□□□ -1.4
CKS1B-204ENST00000471245 SERHL2Q9H4I8 314 aa6.3□□□□□ -1.4
CKS1B-204ENST00000471245 KCNK9Q9NPC2 374 aa6.3□□□□□ -1.4
CKS1B-204ENST00000471245 LIN7CQ9NUP9 197 aaKnown RBP6.3□□□□□ -1.4
CKS1B-204ENST00000471245 TMEM160Q9NX00 188 aa6.3□□□□□ -1.4
CKS1B-204ENST00000471245 IFT80Q9P2H3 777 aaPredicted RBP6.3□□□□□ -1.4
CKS1B-204ENST00000471245 HEG1Q9ULI3 1381 aa6.3□□□□□ -1.4
CKS1B-204ENST00000471245 CCDC196A0A1B0GTZ2 297 aa6.29□□□□□ -1.4
CKS1B-204ENST00000471245 E7EVH7 732 aa6.29□□□□□ -1.4
CKS1B-204ENST00000471245 RHOBTB3O94955 611 aa6.29□□□□□ -1.4
CKS1B-204ENST00000471245 NXPH3O95157 252 aa6.29□□□□□ -1.4
CKS1B-204ENST00000471245 PDHA1P08559 390 aa6.29□□□□□ -1.4
CKS1B-204ENST00000471245 CNPP09543 421 aaKnown RBP6.29□□□□□ -1.4
CKS1B-204ENST00000471245 TMEM225BP0DP42 221 aa6.29□□□□□ -1.4
CKS1B-204ENST00000471245 PBX1P40424 430 aa6.29□□□□□ -1.4
CKS1B-204ENST00000471245 GSTM5P46439 218 aa6.29□□□□□ -1.4
CKS1B-204ENST00000471245 CHRNDQ07001 517 aa6.29□□□□□ -1.4
CKS1B-204ENST00000471245 G3BP1Q13283 466 aaKnown RBP eCLIP6.29□□□□□ -1.4
CKS1B-204ENST00000471245 KCNJ12Q14500 433 aa6.29□□□□□ -1.4
CKS1B-204ENST00000471245 SF3B3Q15393 1217 aaKnown RBP6.29□□□□□ -1.4
CKS1B-204ENST00000471245 TBRG1Q3YBR2 411 aa6.29□□□□□ -1.4
CKS1B-204ENST00000471245 GALNTL6Q49A17 601 aa6.29□□□□□ -1.4
CKS1B-204ENST00000471245 AASDHQ4L235 1098 aaPredicted RBP6.29□□□□□ -1.4
CKS1B-204ENST00000471245 BBS12Q6ZW61 710 aa6.29□□□□□ -1.4
CKS1B-204ENST00000471245 GPR149Q86SP6 731 aa6.29□□□□□ -1.4
CKS1B-204ENST00000471245 NBPF5PQ86XG9 351 aaPredicted RBP6.29□□□□□ -1.4
CKS1B-204ENST00000471245 ARHGEF19Q8IW93 802 aa6.29□□□□□ -1.4
CKS1B-204ENST00000471245 TTC5Q8N0Z6 440 aa6.29□□□□□ -1.4
CKS1B-204ENST00000471245 USP38Q8NB14 1042 aa6.29□□□□□ -1.4
CKS1B-204ENST00000471245 CEP70Q8NHQ1 597 aa6.29□□□□□ -1.4
CKS1B-204ENST00000471245 CSGALNACT1Q8TDX6 532 aa6.29□□□□□ -1.4
CKS1B-204ENST00000471245 HMGB4Q8WW32 186 aa6.29□□□□□ -1.4
CKS1B-204ENST00000471245 GOLGA1Q92805 767 aa6.29□□□□□ -1.4
CKS1B-204ENST00000471245 WDYHV1Q96HA8 205 aa6.29□□□□□ -1.4
CKS1B-204ENST00000471245 NOD2Q9HC29 1040 aa6.29□□□□□ -1.4
CKS1B-204ENST00000471245 GABRQQ9UN88 632 aa6.29□□□□□ -1.4
CKS1B-204ENST00000471245 FZD1Q9UP38 647 aa6.29□□□□□ -1.4
CKS1B-204ENST00000471245 DERAQ9Y315 318 aa6.29□□□□□ -1.4
CKS1B-204ENST00000471245 UBE2J1Q9Y385 318 aaPredicted RBP6.29□□□□□ -1.4
CKS1B-204ENST00000471245 LAMB4A4D0S4 1761 aa6.29□□□□□ -1.4
CKS1B-204ENST00000471245 LAMB2P55268 1798 aa6.29□□□□□ -1.4
CKS1B-204ENST00000471245 ADGRA2Q96PE1 1338 aa6.28□□□□□ -1.4
CKS1B-204ENST00000471245 WDR27A2RRH5 827 aa6.28□□□□□ -1.4
CKS1B-204ENST00000471245 UNC119BA6NIH7 251 aa6.28□□□□□ -1.4
CKS1B-204ENST00000471245 SLC38A8A6NNN8 435 aa6.28□□□□□ -1.4
CKS1B-204ENST00000471245 KIF28PB7ZC32 967 aa6.28□□□□□ -1.4
CKS1B-204ENST00000471245 VNN1O95497 513 aa6.28□□□□□ -1.4
CKS1B-204ENST00000471245 ERBB2P04626 1255 aa6.28□□□□□ -1.4
CKS1B-204ENST00000471245 RHOP08100 348 aa6.28□□□□□ -1.4
CKS1B-204ENST00000471245 IL6RP08887 468 aaPredicted RBP6.28□□□□□ -1.4
CKS1B-204ENST00000471245 DRD1P21728 446 aa6.28□□□□□ -1.4
CKS1B-204ENST00000471245 ALDH1B1P30837 517 aa6.28□□□□□ -1.4
CKS1B-204ENST00000471245 CASP2P42575 452 aa6.28□□□□□ -1.4
CKS1B-204ENST00000471245 CCR5P51681 352 aa6.28□□□□□ -1.4
CKS1B-204ENST00000471245 MPP1Q00013 466 aa6.28□□□□□ -1.4
CKS1B-204ENST00000471245 EIF2B5Q13144 721 aaKnown RBP6.28□□□□□ -1.4
CKS1B-204ENST00000471245 SLC12A1Q13621 1099 aa6.28□□□□□ -1.4
CKS1B-204ENST00000471245 TP53BP2Q13625 1128 aa6.28□□□□□ -1.4
CKS1B-204ENST00000471245 CDSNQ15517 529 aa6.28□□□□□ -1.4
CKS1B-204ENST00000471245 TBCCQ15814 346 aa6.28□□□□□ -1.4
CKS1B-204ENST00000471245 MTHFSDQ2M296 383 aaKnown RBP6.28□□□□□ -1.4
CKS1B-204ENST00000471245 P3H1Q32P28 736 aa6.28□□□□□ -1.4
CKS1B-204ENST00000471245 TIGD2Q4W5G0 525 aa6.28□□□□□ -1.4
CKS1B-204ENST00000471245 HYIQ5T013 277 aa6.28□□□□□ -1.4
CKS1B-204ENST00000471245 CCDC144NLQ6NUI1 221 aa6.28□□□□□ -1.4
CKS1B-204ENST00000471245 RSRC2Q7L4I2 434 aaKnown RBP6.28□□□□□ -1.4
CKS1B-204ENST00000471245 MAATS1Q7Z4T9 603 aa6.28□□□□□ -1.4
CKS1B-204ENST00000471245 C1orf210Q8IVY1 113 aa6.28□□□□□ -1.4
CKS1B-204ENST00000471245 SLC22A17Q8WUG5 538 aa6.28□□□□□ -1.4
CKS1B-204ENST00000471245 LENG9Q96B70 501 aa6.28□□□□□ -1.4
CKS1B-204ENST00000471245 EIF3CQ99613 913 aaKnown RBP6.28□□□□□ -1.4
CKS1B-204ENST00000471245 TEX13AQ9BXU3 409 aaPredicted RBP6.28□□□□□ -1.4
CKS1B-204ENST00000471245 GLIS2Q9BZE0 524 aaPredicted RBP6.28□□□□□ -1.4
CKS1B-204ENST00000471245 PANK3Q9H999 370 aa6.28□□□□□ -1.4
CKS1B-204ENST00000471245 ADARB2Q9NS39 739 aaKnown RBP6.28□□□□□ -1.4
CKS1B-204ENST00000471245 KLC4Q9NSK0 619 aa6.28□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms