RNA–Protein interactions for RNA: ENST00000471218.5

PTPRE-207, Transcript of protein tyrosine phosphatase, receptor type E, humanhuman

TSL 3 BASIC

Gene PTPRE, Length 522 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRE-207ENST00000471218 PABPC1LQ4VXU2 614 aaKnown RBP9.44□□□□□ -0.9
PTPRE-207ENST00000471218 CFAP58Q5T655 872 aa9.44□□□□□ -0.9
PTPRE-207ENST00000471218 SH3PXD2AQ5TCZ1 1133 aa9.44□□□□□ -0.9
PTPRE-207ENST00000471218 DAB2IPQ5VWQ8 1189 aa9.44□□□□□ -0.9
PTPRE-207ENST00000471218 SYPL2Q5VXT5 272 aa9.44□□□□□ -0.9
PTPRE-207ENST00000471218 NUGGCQ68CJ6 796 aa9.44□□□□□ -0.9
PTPRE-207ENST00000471218 ZNF852Q6ZMS4 543 aa9.44□□□□□ -0.9
PTPRE-207ENST00000471218 RNF19BQ6ZMZ0 732 aa9.44□□□□□ -0.9
PTPRE-207ENST00000471218 MAMSTRQ6ZN01 415 aa9.44□□□□□ -0.9
PTPRE-207ENST00000471218 SCD5Q86SK9 330 aa9.44□□□□□ -0.9
PTPRE-207ENST00000471218 TAC4Q86UU9 113 aa9.44□□□□□ -0.9
PTPRE-207ENST00000471218 PQLC3Q8N755 202 aa9.44□□□□□ -0.9
PTPRE-207ENST00000471218 STKLD1Q8NE28 680 aa9.44□□□□□ -0.9
PTPRE-207ENST00000471218 PCDH19Q8TAB3 1148 aa9.44□□□□□ -0.9
PTPRE-207ENST00000471218 SCAMP5Q8TAC9 235 aa9.44□□□□□ -0.9
PTPRE-207ENST00000471218 ACTL9Q8TC94 416 aa9.44□□□□□ -0.9
PTPRE-207ENST00000471218 CASKIN2Q8WXE0 1202 aa9.44□□□□□ -0.9
PTPRE-207ENST00000471218 FATE1Q969F0 183 aa9.44□□□□□ -0.9
PTPRE-207ENST00000471218 FBXO32Q969P5 355 aa9.44□□□□□ -0.9
PTPRE-207ENST00000471218 AZIN2Q96A70 460 aa9.44□□□□□ -0.9
PTPRE-207ENST00000471218 SLC39A13Q96H72 371 aa9.44□□□□□ -0.9
PTPRE-207ENST00000471218 PPP1R2P1Q96PQ5 205 aa9.44□□□□□ -0.9
PTPRE-207ENST00000471218 FMO2Q99518 471 aa9.44□□□□□ -0.9
PTPRE-207ENST00000471218 FUT8Q9BYC5 575 aa9.44□□□□□ -0.9
PTPRE-207ENST00000471218 DHX35Q9H5Z1 703 aaKnown RBP9.44□□□□□ -0.9
PTPRE-207ENST00000471218 ZDHHC18Q9NUE0 388 aa9.44□□□□□ -0.9
PTPRE-207ENST00000471218 MTPAPQ9NVV4 582 aaKnown RBP eCLIP9.44□□□□□ -0.9
PTPRE-207ENST00000471218 RAB23Q9ULC3 237 aa9.44□□□□□ -0.9
PTPRE-207ENST00000471218 NAALADL1Q9UQQ1 740 aa9.44□□□□□ -0.9
PTPRE-207ENST00000471218 ZNF148Q9UQR1 794 aa9.44□□□□□ -0.9
PTPRE-207ENST00000471218 R3HDM2Q9Y2K5 976 aaKnown RBP9.44□□□□□ -0.9
PTPRE-207ENST00000471218 TPRP12270 2363 aaKnown RBP9.44□□□□□ -0.9
PTPRE-207ENST00000471218 DMXL1Q9Y485 3027 aa9.44□□□□□ -0.9
PTPRE-207ENST00000471218 CEP250Q9BV73 2442 aa9.43□□□□□ -0.9
PTPRE-207ENST00000471218 CACNA1IQ9P0X4 2223 aa9.43□□□□□ -0.9
PTPRE-207ENST00000471218 MTCL1Q9Y4B5 1905 aaKnown RBP9.43□□□□□ -0.9
PTPRE-207ENST00000471218 FAM170AA1A519 330 aa9.43□□□□□ -0.9
PTPRE-207ENST00000471218 SLC38A8A6NNN8 435 aa9.43□□□□□ -0.9
PTPRE-207ENST00000471218 WASH4PA8MWX3 477 aa9.43□□□□□ -0.9
PTPRE-207ENST00000471218 KCNU1A8MYU2 1149 aa9.43□□□□□ -0.9
PTPRE-207ENST00000471218 ZNF197O14709 1029 aa9.43□□□□□ -0.9
PTPRE-207ENST00000471218 PPP1R12AO14974 1030 aaPredicted RBP9.43□□□□□ -0.9
PTPRE-207ENST00000471218 ECI2O75521 394 aa9.43□□□□□ -0.9
PTPRE-207ENST00000471218 STK10O94804 968 aaKnown RBP9.43□□□□□ -0.9
PTPRE-207ENST00000471218 VNN2O95498 520 aa9.43□□□□□ -0.9
PTPRE-207ENST00000471218 IGLV3-27P01718 113 aa9.43□□□□□ -0.9
PTPRE-207ENST00000471218 APOEP02649 317 aa9.43□□□□□ -0.9
PTPRE-207ENST00000471218 C8AP07357 584 aa9.43□□□□□ -0.9
PTPRE-207ENST00000471218 OR4Q2P0C623 313 aa9.43□□□□□ -0.9
PTPRE-207ENST00000471218 SPATA31D3P0C874 917 aa9.43□□□□□ -0.9
PTPRE-207ENST00000471218 RBP3P10745 1247 aa9.43□□□□□ -0.9
PTPRE-207ENST00000471218 KRT10P13645 584 aa9.43□□□□□ -0.9
PTPRE-207ENST00000471218 ECHS1P30084 290 aa9.43□□□□□ -0.9
PTPRE-207ENST00000471218 ELF1P32519 619 aa9.43□□□□□ -0.9
PTPRE-207ENST00000471218 ACTN2P35609 894 aa9.43□□□□□ -0.9
PTPRE-207ENST00000471218 MAGEA6P43360 314 aa9.43□□□□□ -0.9
PTPRE-207ENST00000471218 CARSP49589 748 aaKnown RBP9.43□□□□□ -0.9
PTPRE-207ENST00000471218 EPHB3P54753 998 aa9.43□□□□□ -0.9
PTPRE-207ENST00000471218 EIF3EP60228 445 aaKnown RBP9.43□□□□□ -0.9
PTPRE-207ENST00000471218 SLC7A5Q01650 507 aa9.43□□□□□ -0.9
PTPRE-207ENST00000471218 OTUD4Q01804 1114 aaKnown RBP9.43□□□□□ -0.9
PTPRE-207ENST00000471218 DUSP4Q13115 394 aa9.43□□□□□ -0.9
PTPRE-207ENST00000471218 HLTFQ14527 1009 aaKnown RBP eCLIP9.43□□□□□ -0.9
PTPRE-207ENST00000471218 UBXN2BQ14CS0 331 aa9.43□□□□□ -0.9
PTPRE-207ENST00000471218 P3H1Q32P28 736 aa9.43□□□□□ -0.9
PTPRE-207ENST00000471218 ARMC3Q5W041 872 aa9.43□□□□□ -0.9
PTPRE-207ENST00000471218 SPATA31D4Q6ZUB0 917 aa9.43□□□□□ -0.9
PTPRE-207ENST00000471218 RFX8Q6ZV50 586 aa9.43□□□□□ -0.9
PTPRE-207ENST00000471218 GRASPQ7Z6J2 395 aaPredicted RBP9.43□□□□□ -0.9
PTPRE-207ENST00000471218 ADAT2Q7Z6V5 191 aaKnown RBP9.43□□□□□ -0.9
PTPRE-207ENST00000471218 FAM131BQ86XD5 332 aa9.43□□□□□ -0.9
PTPRE-207ENST00000471218 UNC45BQ8IWX7 931 aa9.43□□□□□ -0.9
PTPRE-207ENST00000471218 CCDC185Q8N715 623 aa9.43□□□□□ -0.9
PTPRE-207ENST00000471218 GOLGA6L1Q8N7Z2 621 aa9.43□□□□□ -0.9
PTPRE-207ENST00000471218 SUMF1Q8NBK3 374 aa9.43□□□□□ -0.9
PTPRE-207ENST00000471218 C1orf54Q8WWF1 131 aa9.43□□□□□ -0.9
PTPRE-207ENST00000471218 FGF13Q92913 245 aa9.43□□□□□ -0.9
PTPRE-207ENST00000471218 ART4Q93070 314 aa9.43□□□□□ -0.9
PTPRE-207ENST00000471218 BTN2A3PQ96KV6 586 aa9.43□□□□□ -0.9
PTPRE-207ENST00000471218 CCDC114Q96M63 670 aa9.43□□□□□ -0.9
PTPRE-207ENST00000471218 OLFM3Q96PB7 478 aa9.43□□□□□ -0.9
PTPRE-207ENST00000471218 KCTD15Q96SI1 283 aaPredicted RBP9.43□□□□□ -0.9
PTPRE-207ENST00000471218 SEPT5Q99719 369 aaPredicted RBP9.43□□□□□ -0.9
PTPRE-207ENST00000471218 HERPUD2Q9BSE4 406 aa9.43□□□□□ -0.9
PTPRE-207ENST00000471218 RTKNQ9BST9 563 aa9.43□□□□□ -0.9
PTPRE-207ENST00000471218 ADAM33Q9BZ11 813 aa9.43□□□□□ -0.9
PTPRE-207ENST00000471218 CATSPERBQ9H7T0 1116 aa9.43□□□□□ -0.9
PTPRE-207ENST00000471218 MED4Q9NPJ6 270 aa9.43□□□□□ -0.9
PTPRE-207ENST00000471218 ARHGEF4Q9NR80 690 aa9.43□□□□□ -0.9
PTPRE-207ENST00000471218 KLHL11Q9NVR0 708 aa9.43□□□□□ -0.9
PTPRE-207ENST00000471218 GRHL1Q9NZI5 618 aa9.43□□□□□ -0.9
PTPRE-207ENST00000471218 CWC15Q9P013 229 aaKnown RBP9.43□□□□□ -0.9
PTPRE-207ENST00000471218 PAK5Q9P286 719 aa9.43□□□□□ -0.9
PTPRE-207ENST00000471218 PPARGC1AQ9UBK2 798 aaKnown RBP9.43□□□□□ -0.9
PTPRE-207ENST00000471218 ASIC3Q9UHC3 531 aa9.43□□□□□ -0.9
PTPRE-207ENST00000471218 GMEB2Q9UKD1 530 aa9.43□□□□□ -0.9
PTPRE-207ENST00000471218 CDV3Q9UKY7 258 aaKnown RBP9.43□□□□□ -0.9
PTPRE-207ENST00000471218 DNPEPQ9ULA0 475 aa9.43□□□□□ -0.9
PTPRE-207ENST00000471218 VWA8A3KMH1 1905 aa9.43□□□□□ -0.9
PTPRE-207ENST00000471218 A0A1W2PQH9 124 aa9.42□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms