RNA–Protein interactions for RNA: ENST00000471046.1

LAMP1-202, Transcript of lysosomal associated membrane protein 1, humanhuman

TSL 3

Gene LAMP1, Length 424 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LAMP1-202ENST00000471046 NFKB2Q00653 900 aa13.26□□□□□ -0.29
LAMP1-202ENST00000471046 SFSWAPQ12872 951 aaKnown RBP13.26□□□□□ -0.29
LAMP1-202ENST00000471046 KNOP1Q1ED39 458 aaKnown RBP13.26□□□□□ -0.29
LAMP1-202ENST00000471046 FAM133BQ5BKY9 247 aaKnown RBP13.26□□□□□ -0.29
LAMP1-202ENST00000471046 C3orf38Q5JPI3 329 aa13.26□□□□□ -0.29
LAMP1-202ENST00000471046 LRRK2Q5S007 2527 aa13.26□□□□□ -0.29
LAMP1-202ENST00000471046 PIK3R6Q5UE93 754 aa13.26□□□□□ -0.29
LAMP1-202ENST00000471046 UNC13DQ70J99 1090 aa13.26□□□□□ -0.29
LAMP1-202ENST00000471046 IQCHQ86VS3 1027 aa13.26□□□□□ -0.29
LAMP1-202ENST00000471046 FAM131CQ96AQ9 280 aa13.26□□□□□ -0.29
LAMP1-202ENST00000471046 MYEOVQ96EZ4 313 aa13.26□□□□□ -0.29
LAMP1-202ENST00000471046 SLC39A2Q9NP94 309 aa13.26□□□□□ -0.29
LAMP1-202ENST00000471046 OLA1Q9NTK5 396 aaKnown RBP13.26□□□□□ -0.29
LAMP1-202ENST00000471046 DMAC2Q9NW81 257 aa13.26□□□□□ -0.29
LAMP1-202ENST00000471046 TJP2Q9UDY2 1190 aa13.26□□□□□ -0.29
LAMP1-202ENST00000471046 CYTH4Q9UIA0 394 aa13.26□□□□□ -0.29
LAMP1-202ENST00000471046 TPX2Q9ULW0 747 aaKnown RBP13.26□□□□□ -0.29
LAMP1-202ENST00000471046 SATB2Q9UPW6 733 aa13.26□□□□□ -0.29
LAMP1-202ENST00000471046 CA5BQ9Y2D0 317 aa13.26□□□□□ -0.29
LAMP1-202ENST00000471046 EDDM13A0A1B0GTR0 161 aa13.25□□□□□ -0.29
LAMP1-202ENST00000471046 TARSL2A2RTX5 802 aaKnown RBP13.25□□□□□ -0.29
LAMP1-202ENST00000471046 PMS2P1A4D2B8 440 aa13.25□□□□□ -0.29
LAMP1-202ENST00000471046 TULP2O00295 520 aa13.25□□□□□ -0.29
LAMP1-202ENST00000471046 ZBED1O96006 694 aa13.25□□□□□ -0.29
LAMP1-202ENST00000471046 ADH1BP00325 375 aa13.25□□□□□ -0.29
LAMP1-202ENST00000471046 SLFN14P0C7P3 912 aa13.25□□□□□ -0.29
LAMP1-202ENST00000471046 CKMT1AP12532 417 aa13.25□□□□□ -0.29
LAMP1-202ENST00000471046 DGKAP23743 735 aa13.25□□□□□ -0.29
LAMP1-202ENST00000471046 MZF1P28698 734 aaPredicted RBP13.25□□□□□ -0.29
LAMP1-202ENST00000471046 MAT2AP31153 395 aaKnown RBP13.25□□□□□ -0.29
LAMP1-202ENST00000471046 TKTL1P51854 596 aa13.25□□□□□ -0.29
LAMP1-202ENST00000471046 ZNF394Q53GI3 561 aa13.25□□□□□ -0.29
LAMP1-202ENST00000471046 MPP7Q5T2T1 576 aa13.25□□□□□ -0.29
LAMP1-202ENST00000471046 PM20D1Q6GTS8 502 aa13.25□□□□□ -0.29
LAMP1-202ENST00000471046 MFN1Q8IWA4 741 aa13.25□□□□□ -0.29
LAMP1-202ENST00000471046 STK40Q8N2I9 435 aa13.25□□□□□ -0.29
LAMP1-202ENST00000471046 EDEM1Q92611 657 aa13.25□□□□□ -0.29
LAMP1-202ENST00000471046 PRR11Q96HE9 360 aaPredicted RBP13.25□□□□□ -0.29
LAMP1-202ENST00000471046 USP28Q96RU2 1077 aa13.25□□□□□ -0.29
LAMP1-202ENST00000471046 C7orf25Q9BPX7 421 aa13.25□□□□□ -0.29
LAMP1-202ENST00000471046 FAM117AQ9C073 453 aa13.25□□□□□ -0.29
LAMP1-202ENST00000471046 LRRC27Q9C0I9 530 aa13.25□□□□□ -0.29
LAMP1-202ENST00000471046 NIF3L1Q9GZT8 377 aa13.25□□□□□ -0.29
LAMP1-202ENST00000471046 CYP3A43Q9HB55 503 aa13.25□□□□□ -0.29
LAMP1-202ENST00000471046 STIM2Q9P246 746 aa13.25□□□□□ -0.29
LAMP1-202ENST00000471046 ERVW-1Q9UQF0 538 aa13.25□□□□□ -0.29
LAMP1-202ENST00000471046 HEMK1Q9Y5R4 338 aaPredicted RBP13.25□□□□□ -0.29
LAMP1-202ENST00000471046 ZFC3H1O60293 1989 aaKnown RBP13.24□□□□□ -0.29
LAMP1-202ENST00000471046 LRP4O75096 1905 aa13.24□□□□□ -0.29
LAMP1-202ENST00000471046 TBC1D3DA0A087WVF3 549 aa13.24□□□□□ -0.29
LAMP1-202ENST00000471046 TBC1D3IA0A087WXS9 549 aa13.24□□□□□ -0.29
LAMP1-202ENST00000471046 TBC1D3EA0A087X179 549 aa13.24□□□□□ -0.29
LAMP1-202ENST00000471046 TBC1D3KA0A087X1G2 549 aa13.24□□□□□ -0.29
LAMP1-202ENST00000471046 TBC1D3FA6NER0 549 aaPredicted RBP13.24□□□□□ -0.29
LAMP1-202ENST00000471046 TBC1D3LB9A6J9 549 aa13.24□□□□□ -0.29
LAMP1-202ENST00000471046 IGLV3-27P01718 113 aa13.24□□□□□ -0.29
LAMP1-202ENST00000471046 TBC1D3HP0C7X1 549 aa13.24□□□□□ -0.29
LAMP1-202ENST00000471046 C5AR1P21730 350 aa13.24□□□□□ -0.29
LAMP1-202ENST00000471046 LINC00303Q3SY05 128 aa13.24□□□□□ -0.29
LAMP1-202ENST00000471046 C6orf132Q5T0Z8 1188 aa13.24□□□□□ -0.29
LAMP1-202ENST00000471046 TBC1D3GQ6DHY5 549 aa13.24□□□□□ -0.29
LAMP1-202ENST00000471046 NADSYN1Q6IA69 706 aa13.24□□□□□ -0.29
LAMP1-202ENST00000471046 TBC1D3CQ6IPX1 549 aa13.24□□□□□ -0.29
LAMP1-202ENST00000471046 MMS22LQ6ZRQ5 1243 aa13.24□□□□□ -0.29
LAMP1-202ENST00000471046 PRPF39Q86UA1 669 aaKnown RBP13.24□□□□□ -0.29
LAMP1-202ENST00000471046 TBC1D3Q8IZP1 549 aaPredicted RBP13.24□□□□□ -0.29
LAMP1-202ENST00000471046 KDM1BQ8NB78 822 aa13.24□□□□□ -0.29
LAMP1-202ENST00000471046 SLC4A11Q8NBS3 891 aa13.24□□□□□ -0.29
LAMP1-202ENST00000471046 FIBINQ8TAL6 211 aa13.24□□□□□ -0.29
LAMP1-202ENST00000471046 TMC2Q8TDI7 906 aa13.24□□□□□ -0.29
LAMP1-202ENST00000471046 DHX58Q96C10 678 aa13.24□□□□□ -0.29
LAMP1-202ENST00000471046 APOLD1Q96LR9 279 aa13.24□□□□□ -0.29
LAMP1-202ENST00000471046 UBXN6Q9BZV1 441 aa13.24□□□□□ -0.29
LAMP1-202ENST00000471046 CUEDC2Q9H467 287 aa13.24□□□□□ -0.29
LAMP1-202ENST00000471046 CHMP5Q9NZZ3 219 aa13.24□□□□□ -0.29
LAMP1-202ENST00000471046 YJEFN3A6XGL0 299 aa13.23□□□□□ -0.29
LAMP1-202ENST00000471046 CDRT15L2A8MXV6 281 aa13.23□□□□□ -0.29
LAMP1-202ENST00000471046 E7ENQ6 273 aa13.23□□□□□ -0.29
LAMP1-202ENST00000471046 PLRG1O43660 514 aaKnown RBP13.23□□□□□ -0.29
LAMP1-202ENST00000471046 MAGEC1O60732 1142 aa13.23□□□□□ -0.29
LAMP1-202ENST00000471046 RTN2O75298 545 aa13.23□□□□□ -0.29
LAMP1-202ENST00000471046 PIAS2O75928 621 aa13.23□□□□□ -0.29
LAMP1-202ENST00000471046 GP1BAP07359 652 aa13.23□□□□□ -0.29
LAMP1-202ENST00000471046 SRPRAP08240 638 aaKnown RBP13.23□□□□□ -0.29
LAMP1-202ENST00000471046 VAV1P15498 845 aa13.23□□□□□ -0.29
LAMP1-202ENST00000471046 SYT1P21579 422 aa13.23□□□□□ -0.29
LAMP1-202ENST00000471046 STK19P49842 368 aaPredicted RBP13.23□□□□□ -0.29
LAMP1-202ENST00000471046 ADIGQ0VDE8 80 aa13.23□□□□□ -0.29
LAMP1-202ENST00000471046 OVGP1Q12889 678 aa13.23□□□□□ -0.29
LAMP1-202ENST00000471046 CLN3Q13286 438 aa13.23□□□□□ -0.29
LAMP1-202ENST00000471046 SLC39A14Q15043 492 aa13.23□□□□□ -0.29
LAMP1-202ENST00000471046 ISXQ2M1V0 245 aa13.23□□□□□ -0.29
LAMP1-202ENST00000471046 POM121L1PQ3SYA9 428 aa13.23□□□□□ -0.29
LAMP1-202ENST00000471046 FSCBQ5H9T9 825 aa13.23□□□□□ -0.29
LAMP1-202ENST00000471046 PITRM1Q5JRX3 1037 aa13.23□□□□□ -0.29
LAMP1-202ENST00000471046 ARHGAP17Q68EM7 881 aa13.23□□□□□ -0.29
LAMP1-202ENST00000471046 MSANTD2Q6P1R3 559 aa13.23□□□□□ -0.29
LAMP1-202ENST00000471046 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP13.23□□□□□ -0.29
LAMP1-202ENST00000471046 CCDC81Q6ZN84 652 aa13.23□□□□□ -0.29
LAMP1-202ENST00000471046 TRIM69Q86WT6 500 aa13.23□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms