RNA–Protein interactions for RNA: ENST00000470737.1

SEMA3F-208, Transcript of semaphorin 3F, humanhuman

TSL 5

Gene SEMA3F, Length 566 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA3F-208ENST00000470737 SLC8A1P32418 973 aa14.36□□□□□ -0.11
SEMA3F-208ENST00000470737 ABCG1P45844 678 aa14.36□□□□□ -0.11
SEMA3F-208ENST00000470737 PSMD8P48556 350 aa14.36□□□□□ -0.11
SEMA3F-208ENST00000470737 ARRB1P49407 418 aaPredicted RBP14.36□□□□□ -0.11
SEMA3F-208ENST00000470737 CCR5P51681 352 aa14.36□□□□□ -0.11
SEMA3F-208ENST00000470737 RPS24P62847 133 aaKnown RBP14.36□□□□□ -0.11
SEMA3F-208ENST00000470737 LRRC63Q05C16 580 aa14.36□□□□□ -0.11
SEMA3F-208ENST00000470737 NNTQ13423 1086 aa14.36□□□□□ -0.11
SEMA3F-208ENST00000470737 CNGA2Q16280 664 aa14.36□□□□□ -0.11
SEMA3F-208ENST00000470737 MS4A13Q5J8X5 152 aa14.36□□□□□ -0.11
SEMA3F-208ENST00000470737 PITRM1Q5JRX3 1037 aa14.36□□□□□ -0.11
SEMA3F-208ENST00000470737 ZNF658Q5TYW1 1059 aaPredicted RBP14.36□□□□□ -0.11
SEMA3F-208ENST00000470737 NADSYN1Q6IA69 706 aa14.36□□□□□ -0.11
SEMA3F-208ENST00000470737 OR14C36Q8NHC7 312 aa14.36□□□□□ -0.11
SEMA3F-208ENST00000470737 DQX1Q8TE96 717 aaKnown RBP14.36□□□□□ -0.11
SEMA3F-208ENST00000470737 CLEC4CQ8WTT0 213 aa14.36□□□□□ -0.11
SEMA3F-208ENST00000470737 TFAP2BQ92481 460 aa14.36□□□□□ -0.11
SEMA3F-208ENST00000470737 SLC35C1Q96A29 364 aa14.36□□□□□ -0.11
SEMA3F-208ENST00000470737 FAM149B1Q96BN6 582 aa14.36□□□□□ -0.11
SEMA3F-208ENST00000470737 MYO19Q96H55 970 aa14.36□□□□□ -0.11
SEMA3F-208ENST00000470737 PRICKLE1Q96MT3 831 aaPredicted RBP14.36□□□□□ -0.11
SEMA3F-208ENST00000470737 TRIM62Q9BVG3 475 aa14.36□□□□□ -0.11
SEMA3F-208ENST00000470737 GTPBP4Q9BZE4 634 aaKnown RBP14.36□□□□□ -0.11
SEMA3F-208ENST00000470737 METTL14Q9HCE5 456 aaKnown RBP14.36□□□□□ -0.11
SEMA3F-208ENST00000470737 ST7Q9NRC1 585 aa14.36□□□□□ -0.11
SEMA3F-208ENST00000470737 SERGEFQ9UGK8 458 aa14.36□□□□□ -0.11
SEMA3F-208ENST00000470737 ADAMTS1Q9UHI8 967 aa14.36□□□□□ -0.11
SEMA3F-208ENST00000470737 TLR6Q9Y2C9 796 aa14.36□□□□□ -0.11
SEMA3F-208ENST00000470737 IGSF10Q6WRI0 2623 aa14.35□□□□□ -0.11
SEMA3F-208ENST00000470737 SHROOM3Q8TF72 1996 aa14.35□□□□□ -0.11
SEMA3F-208ENST00000470737 A0A087WV48 116 aa14.35□□□□□ -0.11
SEMA3F-208ENST00000470737 TTC34A8MYJ7 566 aa14.35□□□□□ -0.11
SEMA3F-208ENST00000470737 PLK4O00444 970 aa14.35□□□□□ -0.11
SEMA3F-208ENST00000470737 GOT1P17174 413 aa14.35□□□□□ -0.11
SEMA3F-208ENST00000470737 FMO5P49326 533 aa14.35□□□□□ -0.11
SEMA3F-208ENST00000470737 ECT2LQ008S8 904 aa14.35□□□□□ -0.11
SEMA3F-208ENST00000470737 STIM1Q13586 685 aa14.35□□□□□ -0.11
SEMA3F-208ENST00000470737 ARID5BQ14865 1188 aa14.35□□□□□ -0.11
SEMA3F-208ENST00000470737 CCDC40Q4G0X9 1142 aa14.35□□□□□ -0.11
SEMA3F-208ENST00000470737 COBLL1Q53SF7 1204 aa14.35□□□□□ -0.11
SEMA3F-208ENST00000470737 PRAMEF14Q5SWL7 426 aa14.35□□□□□ -0.11
SEMA3F-208ENST00000470737 C9orf64Q5T6V5 341 aa14.35□□□□□ -0.11
SEMA3F-208ENST00000470737 ANKRD40Q6AI12 368 aa14.35□□□□□ -0.11
SEMA3F-208ENST00000470737 LRRC69Q6ZNQ3 347 aa14.35□□□□□ -0.11
SEMA3F-208ENST00000470737 ELOA2Q8IYF1 753 aaPredicted RBP14.35□□□□□ -0.11
SEMA3F-208ENST00000470737 CFAP52Q8N1V2 620 aa14.35□□□□□ -0.11
SEMA3F-208ENST00000470737 OXR1Q8N573 874 aa14.35□□□□□ -0.11
SEMA3F-208ENST00000470737 EID2Q8N6I1 236 aa14.35□□□□□ -0.11
SEMA3F-208ENST00000470737 SERAC1Q96JX3 654 aa14.35□□□□□ -0.11
SEMA3F-208ENST00000470737 LMLNQ96KR4 655 aa14.35□□□□□ -0.11
SEMA3F-208ENST00000470737 FCRL2Q96LA5 508 aaPredicted RBP14.35□□□□□ -0.11
SEMA3F-208ENST00000470737 MRGPRX3Q96LB0 322 aa14.35□□□□□ -0.11
SEMA3F-208ENST00000470737 GSDMAQ96QA5 445 aa14.35□□□□□ -0.11
SEMA3F-208ENST00000470737 NUCKS1Q9H1E3 243 aaKnown RBP14.35□□□□□ -0.11
SEMA3F-208ENST00000470737 TJP2Q9UDY2 1190 aa14.35□□□□□ -0.11
SEMA3F-208ENST00000470737 INTS6Q9UL03 887 aaKnown RBP14.35□□□□□ -0.11
SEMA3F-208ENST00000470737 ASXL3Q9C0F0 2248 aa14.34□□□□□ -0.11
SEMA3F-208ENST00000470737 TBC1D3DA0A087WVF3 549 aa14.34□□□□□ -0.11
SEMA3F-208ENST00000470737 TBC1D3IA0A087WXS9 549 aa14.34□□□□□ -0.11
SEMA3F-208ENST00000470737 TBC1D3EA0A087X179 549 aa14.34□□□□□ -0.11
SEMA3F-208ENST00000470737 TBC1D3KA0A087X1G2 549 aa14.34□□□□□ -0.11
SEMA3F-208ENST00000470737 GOLGA6L4A6NEF3 574 aa14.34□□□□□ -0.11
SEMA3F-208ENST00000470737 TBC1D3FA6NER0 549 aaPredicted RBP14.34□□□□□ -0.11
SEMA3F-208ENST00000470737 TBC1D3LB9A6J9 549 aa14.34□□□□□ -0.11
SEMA3F-208ENST00000470737 MAGEC1O60732 1142 aa14.34□□□□□ -0.11
SEMA3F-208ENST00000470737 IL1BP01584 269 aa14.34□□□□□ -0.11
SEMA3F-208ENST00000470737 WNT1P04628 370 aa14.34□□□□□ -0.11
SEMA3F-208ENST00000470737 TBC1D3HP0C7X1 549 aa14.34□□□□□ -0.11
SEMA3F-208ENST00000470737 C5AR1P21730 350 aa14.34□□□□□ -0.11
SEMA3F-208ENST00000470737 CTSOP43234 321 aaPredicted RBP14.34□□□□□ -0.11
SEMA3F-208ENST00000470737 DNAJC3Q13217 504 aa14.34□□□□□ -0.11
SEMA3F-208ENST00000470737 DCAF6Q58WW2 860 aa14.34□□□□□ -0.11
SEMA3F-208ENST00000470737 FSCBQ5H9T9 825 aa14.34□□□□□ -0.11
SEMA3F-208ENST00000470737 TBC1D3GQ6DHY5 549 aa14.34□□□□□ -0.11
SEMA3F-208ENST00000470737 TBC1D3CQ6IPX1 549 aa14.34□□□□□ -0.11
SEMA3F-208ENST00000470737 MMS22LQ6ZRQ5 1243 aa14.34□□□□□ -0.11
SEMA3F-208ENST00000470737 CHSY1Q86X52 802 aa14.34□□□□□ -0.11
SEMA3F-208ENST00000470737 TBC1D3Q8IZP1 549 aaPredicted RBP14.34□□□□□ -0.11
SEMA3F-208ENST00000470737 LGI2Q8N0V4 545 aa14.34□□□□□ -0.11
SEMA3F-208ENST00000470737 FMR1NBQ8N0W7 255 aaPredicted RBP14.34□□□□□ -0.11
SEMA3F-208ENST00000470737 STK40Q8N2I9 435 aa14.34□□□□□ -0.11
SEMA3F-208ENST00000470737 SAP25Q8TEE9 199 aa14.34□□□□□ -0.11
SEMA3F-208ENST00000470737 GDPD2Q9HCC8 539 aa14.34□□□□□ -0.11
SEMA3F-208ENST00000470737 HOOK1Q9UJC3 728 aaKnown RBP14.34□□□□□ -0.11
SEMA3F-208ENST00000470737 NAALADL1Q9UQQ1 740 aa14.34□□□□□ -0.11
SEMA3F-208ENST00000470737 AK5Q9Y6K8 562 aa14.34□□□□□ -0.11
SEMA3F-208ENST00000470737 ITIH6Q6UXX5 1313 aa14.34□□□□□ -0.11
SEMA3F-208ENST00000470737 SMG1Q96Q15 3661 aaKnown RBP14.33□□□□□ -0.12
SEMA3F-208ENST00000470737 LOC400499M0QZD8 3231 aa14.33□□□□□ -0.12
SEMA3F-208ENST00000470737 TRIM49BA6NDI0 452 aa14.33□□□□□ -0.12
SEMA3F-208ENST00000470737 TLR4O00206 839 aa14.33□□□□□ -0.12
SEMA3F-208ENST00000470737 PSMA7O14818 248 aa14.33□□□□□ -0.12
SEMA3F-208ENST00000470737 GABBR2O75899 941 aa14.33□□□□□ -0.12
SEMA3F-208ENST00000470737 EPHA8P29322 1005 aaPredicted RBP14.33□□□□□ -0.12
SEMA3F-208ENST00000470737 ACADSBP45954 432 aa14.33□□□□□ -0.12
SEMA3F-208ENST00000470737 ADPRHP54922 357 aa14.33□□□□□ -0.12
SEMA3F-208ENST00000470737 SULT2A1Q06520 285 aa14.33□□□□□ -0.12
SEMA3F-208ENST00000470737 ELAVL3Q14576 367 aaKnown RBP14.33□□□□□ -0.12
SEMA3F-208ENST00000470737 RAP1GAP2Q684P5 730 aa14.33□□□□□ -0.12
SEMA3F-208ENST00000470737 DSG4Q86SJ6 1040 aa14.33□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms