RNA–Protein interactions for RNA: ENST00000470240.5

SMC4-212, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 3

Gene SMC4, Length 724 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-212ENST00000470240 YY1AP1Q9H869 796 aa8.22□□□□□ -1.09
SMC4-212ENST00000470240 DNAAF2Q9NVR5 837 aaKnown RBP8.22□□□□□ -1.09
SMC4-212ENST00000470240 KCNK4Q9NYG8 393 aa8.22□□□□□ -1.09
SMC4-212ENST00000470240 GTF2IRD1Q9UHL9 959 aa8.22□□□□□ -1.09
SMC4-212ENST00000470240 LNPEPQ9UIQ6 1025 aa8.22□□□□□ -1.09
SMC4-212ENST00000470240 GRID1Q9ULK0 1009 aa8.22□□□□□ -1.09
SMC4-212ENST00000470240 CHKBQ9Y259 395 aa8.22□□□□□ -1.09
SMC4-212ENST00000470240 EPB41L3Q9Y2J2 1087 aaPredicted RBP8.22□□□□□ -1.09
SMC4-212ENST00000470240 HES2Q9Y543 173 aa8.22□□□□□ -1.09
SMC4-212ENST00000470240 PTCH2Q9Y6C5 1203 aa8.22□□□□□ -1.09
SMC4-212ENST00000470240 TRIP11Q15643 1979 aa8.22□□□□□ -1.09
SMC4-212ENST00000470240 M0QYT0 321 aa8.21□□□□□ -1.1
SMC4-212ENST00000470240 RNF103O00237 685 aa8.21□□□□□ -1.1
SMC4-212ENST00000470240 CDK2AP1O14519 115 aa8.21□□□□□ -1.1
SMC4-212ENST00000470240 TRAFD1O14545 582 aaPredicted RBP8.21□□□□□ -1.1
SMC4-212ENST00000470240 PPEF2O14830 753 aa8.21□□□□□ -1.1
SMC4-212ENST00000470240 GYG2O15488 501 aa8.21□□□□□ -1.1
SMC4-212ENST00000470240 DNAJC6O75061 913 aa8.21□□□□□ -1.1
SMC4-212ENST00000470240 POLBP06746 335 aa8.21□□□□□ -1.1
SMC4-212ENST00000470240 KRT16P08779 473 aa8.21□□□□□ -1.1
SMC4-212ENST00000470240 PTPN1P18031 435 aaKnown RBP8.21□□□□□ -1.1
SMC4-212ENST00000470240 CALB2P22676 271 aa8.21□□□□□ -1.1
SMC4-212ENST00000470240 AMPD1P23109 780 aa8.21□□□□□ -1.1
SMC4-212ENST00000470240 IL4RP24394 825 aa8.21□□□□□ -1.1
SMC4-212ENST00000470240 RGS2P41220 211 aa8.21□□□□□ -1.1
SMC4-212ENST00000470240 MAGEA3P43357 314 aa8.21□□□□□ -1.1
SMC4-212ENST00000470240 GLUD2P49448 558 aa8.21□□□□□ -1.1
SMC4-212ENST00000470240 TPI1P60174 286 aa8.21□□□□□ -1.1
SMC4-212ENST00000470240 PDE1BQ01064 536 aa8.21□□□□□ -1.1
SMC4-212ENST00000470240 GBE1Q04446 702 aa8.21□□□□□ -1.1
SMC4-212ENST00000470240 MGAT5Q09328 741 aa8.21□□□□□ -1.1
SMC4-212ENST00000470240 MTM1Q13496 603 aa8.21□□□□□ -1.1
SMC4-212ENST00000470240 KRT72Q14CN4 511 aa8.21□□□□□ -1.1
SMC4-212ENST00000470240 PRKD1Q15139 912 aaPredicted RBP8.21□□□□□ -1.1
SMC4-212ENST00000470240 CA9Q16790 459 aa8.21□□□□□ -1.1
SMC4-212ENST00000470240 TSNAXIP1Q2TAA8 658 aa8.21□□□□□ -1.1
SMC4-212ENST00000470240 XKR4Q5GH76 650 aa8.21□□□□□ -1.1
SMC4-212ENST00000470240 SPANXN3Q5MJ09 141 aa8.21□□□□□ -1.1
SMC4-212ENST00000470240 SYCP2LQ5T4T6 812 aa8.21□□□□□ -1.1
SMC4-212ENST00000470240 STXBP5Q5T5C0 1151 aa8.21□□□□□ -1.1
SMC4-212ENST00000470240 TIFABQ6ZNK6 161 aa8.21□□□□□ -1.1
SMC4-212ENST00000470240 CLNKQ7Z7G1 428 aa8.21□□□□□ -1.1
SMC4-212ENST00000470240 PIGZQ86VD9 579 aa8.21□□□□□ -1.1
SMC4-212ENST00000470240 CAND1Q86VP6 1230 aaKnown RBP8.21□□□□□ -1.1
SMC4-212ENST00000470240 FAM131BQ86XD5 332 aa8.21□□□□□ -1.1
SMC4-212ENST00000470240 IGDCC3Q8IVU1 814 aa8.21□□□□□ -1.1
SMC4-212ENST00000470240 WDR75Q8IWA0 830 aaKnown RBP8.21□□□□□ -1.1
SMC4-212ENST00000470240 NDUFAF2Q8N183 169 aa8.21□□□□□ -1.1
SMC4-212ENST00000470240 COLGALT1Q8NBJ5 622 aa8.21□□□□□ -1.1
SMC4-212ENST00000470240 SMC1BQ8NDV3 1235 aa8.21□□□□□ -1.1
SMC4-212ENST00000470240 NPLOC4Q8TAT6 608 aa8.21□□□□□ -1.1
SMC4-212ENST00000470240 KBTBD7Q8WVZ9 684 aa8.21□□□□□ -1.1
SMC4-212ENST00000470240 STMN2Q93045 179 aa8.21□□□□□ -1.1
SMC4-212ENST00000470240 NTAN1Q96AB6 310 aa8.21□□□□□ -1.1
SMC4-212ENST00000470240 PGBD4Q96DM1 585 aa8.21□□□□□ -1.1
SMC4-212ENST00000470240 NSL1Q96IY1 281 aa8.21□□□□□ -1.1
SMC4-212ENST00000470240 SERAC1Q96JX3 654 aa8.21□□□□□ -1.1
SMC4-212ENST00000470240 VAT1Q99536 393 aa8.21□□□□□ -1.1
SMC4-212ENST00000470240 SYT15Q9BQS2 421 aa8.21□□□□□ -1.1
SMC4-212ENST00000470240 WDR83Q9BRX9 315 aaKnown RBP8.21□□□□□ -1.1
SMC4-212ENST00000470240 C11orf84Q9BUA3 381 aaPredicted RBP8.21□□□□□ -1.1
SMC4-212ENST00000470240 B3GNT5Q9BYG0 378 aa8.21□□□□□ -1.1
SMC4-212ENST00000470240 STN1Q9H668 368 aaKnown RBP8.21□□□□□ -1.1
SMC4-212ENST00000470240 SPC25Q9HBM1 224 aa8.21□□□□□ -1.1
SMC4-212ENST00000470240 CNGB3Q9NQW8 809 aa8.21□□□□□ -1.1
SMC4-212ENST00000470240 ARHGEF4Q9NR80 690 aa8.21□□□□□ -1.1
SMC4-212ENST00000470240 KRT82Q9NSB4 513 aa8.21□□□□□ -1.1
SMC4-212ENST00000470240 PCMTD2Q9NV79 361 aa8.21□□□□□ -1.1
SMC4-212ENST00000470240 NSMCE4AQ9NXX6 385 aa8.21□□□□□ -1.1
SMC4-212ENST00000470240 DTLQ9NZJ0 730 aa8.21□□□□□ -1.1
SMC4-212ENST00000470240 BFARQ9NZS9 450 aa8.21□□□□□ -1.1
SMC4-212ENST00000470240 KLK14Q9P0G3 267 aa8.21□□□□□ -1.1
SMC4-212ENST00000470240 SEPT10Q9P0V9 454 aa8.21□□□□□ -1.1
SMC4-212ENST00000470240 KLHL8Q9P2G9 620 aaPredicted RBP8.21□□□□□ -1.1
SMC4-212ENST00000470240 DCDC2Q9UHG0 476 aa8.21□□□□□ -1.1
SMC4-212ENST00000470240 HAO1Q9UJM8 370 aa8.21□□□□□ -1.1
SMC4-212ENST00000470240 DCTN4Q9UJW0 460 aa8.21□□□□□ -1.1
SMC4-212ENST00000470240 TRHDEQ9UKU6 1024 aa8.21□□□□□ -1.1
SMC4-212ENST00000470240 CDH9Q9ULB4 789 aa8.21□□□□□ -1.1
SMC4-212ENST00000470240 PLLPQ9Y342 182 aa8.21□□□□□ -1.1
SMC4-212ENST00000470240 IPPQ9Y573 584 aa8.21□□□□□ -1.1
SMC4-212ENST00000470240 SYNJ2BP-COX16A0A087WUM0 186 aa8.2□□□□□ -1.1
SMC4-212ENST00000470240 VGLL3A8MV65 326 aa8.2□□□□□ -1.1
SMC4-212ENST00000470240 HAS3O00219 553 aa8.2□□□□□ -1.1
SMC4-212ENST00000470240 CREB3O43889 395 aa8.2□□□□□ -1.1
SMC4-212ENST00000470240 MFSD11O43934 449 aa8.2□□□□□ -1.1
SMC4-212ENST00000470240 AVILO75366 819 aa8.2□□□□□ -1.1
SMC4-212ENST00000470240 H2AFYO75367 372 aaKnown RBP8.2□□□□□ -1.1
SMC4-212ENST00000470240 CIB2O75838 187 aa8.2□□□□□ -1.1
SMC4-212ENST00000470240 DGKIO75912 1065 aa8.2□□□□□ -1.1
SMC4-212ENST00000470240 METTL18O95568 372 aa8.2□□□□□ -1.1
SMC4-212ENST00000470240 ESRRAP11474 423 aaPredicted RBP8.2□□□□□ -1.1
SMC4-212ENST00000470240 ODC1P11926 461 aa8.2□□□□□ -1.1
SMC4-212ENST00000470240 GOT1P17174 413 aa8.2□□□□□ -1.1
SMC4-212ENST00000470240 BGNP21810 368 aa8.2□□□□□ -1.1
SMC4-212ENST00000470240 RPL9P32969 192 aaKnown RBP8.2□□□□□ -1.1
SMC4-212ENST00000470240 CYP2C18P33260 490 aa8.2□□□□□ -1.1
SMC4-212ENST00000470240 CRHR1P34998 444 aa8.2□□□□□ -1.1
SMC4-212ENST00000470240 ETV4P43268 484 aa8.2□□□□□ -1.1
SMC4-212ENST00000470240 LILRA4P59901 499 aa8.2□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 44.5 ms