RNA–Protein interactions for RNA: ENST00000470094.1

BRCA2-202, Transcript of BRCA2, DNA repair associated, humanhuman

TSL 5

Gene BRCA2, Length 842 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA2-202ENST00000470094 GRHPRQ9UBQ7 328 aa4.4□□□□□ -1.71
BRCA2-202ENST00000470094 UTS2RQ9UKP6 389 aa4.4□□□□□ -1.71
BRCA2-202ENST00000470094 BAG5Q9UL15 447 aa4.4□□□□□ -1.71
BRCA2-202ENST00000470094 TNFSF13BQ9Y275 285 aa4.4□□□□□ -1.71
BRCA2-202ENST00000470094 PCDHA10Q9Y5I2 948 aa4.4□□□□□ -1.71
BRCA2-202ENST00000470094 CACNA1IQ9P0X4 2223 aa4.4□□□□□ -1.71
BRCA2-202ENST00000470094 hCG_1642624A0A1W2PR95 340 aa4.39□□□□□ -1.71
BRCA2-202ENST00000470094 HMX3A6NHT5 357 aa4.39□□□□□ -1.71
BRCA2-202ENST00000470094 RHODO00212 210 aa4.39□□□□□ -1.71
BRCA2-202ENST00000470094 TLX3O43711 291 aaPredicted RBP4.39□□□□□ -1.71
BRCA2-202ENST00000470094 TULP3O75386 442 aa4.39□□□□□ -1.71
BRCA2-202ENST00000470094 LDHAP00338 332 aaKnown RBP4.39□□□□□ -1.71
BRCA2-202ENST00000470094 CHKAP35790 457 aa4.39□□□□□ -1.71
BRCA2-202ENST00000470094 PNLIPRP1P54315 467 aa4.39□□□□□ -1.71
BRCA2-202ENST00000470094 TWIST1Q15672 202 aa4.39□□□□□ -1.71
BRCA2-202ENST00000470094 GPR162Q16538 588 aa4.39□□□□□ -1.71
BRCA2-202ENST00000470094 GALNTL6Q49A17 601 aa4.39□□□□□ -1.71
BRCA2-202ENST00000470094 KIAA1755Q5JYT7 1200 aa4.39□□□□□ -1.71
BRCA2-202ENST00000470094 TANGO2Q6ICL3 276 aa4.39□□□□□ -1.71
BRCA2-202ENST00000470094 DGAT2L7PQ6IED9 249 aa4.39□□□□□ -1.71
BRCA2-202ENST00000470094 ERAP2Q6P179 960 aa4.39□□□□□ -1.71
BRCA2-202ENST00000470094 RRAGAQ7L523 313 aa4.39□□□□□ -1.71
BRCA2-202ENST00000470094 DDIASQ8IXT1 998 aa4.39□□□□□ -1.71
BRCA2-202ENST00000470094 SMC5Q8IY18 1101 aa4.39□□□□□ -1.71
BRCA2-202ENST00000470094 MMP21Q8N119 569 aa4.39□□□□□ -1.71
BRCA2-202ENST00000470094 ZNF548Q8NEK5 533 aaPredicted RBP4.39□□□□□ -1.71
BRCA2-202ENST00000470094 OTUD7AQ8TE49 926 aaPredicted RBP4.39□□□□□ -1.71
BRCA2-202ENST00000470094 ATP2A3Q93084 1043 aa4.39□□□□□ -1.71
BRCA2-202ENST00000470094 CLMNQ96JQ2 1002 aa4.39□□□□□ -1.71
BRCA2-202ENST00000470094 ADAD1Q96M93 576 aaKnown RBP4.39□□□□□ -1.71
BRCA2-202ENST00000470094 PIGSQ96S52 555 aa4.39□□□□□ -1.71
BRCA2-202ENST00000470094 PAGR1Q9BTK6 254 aa4.39□□□□□ -1.71
BRCA2-202ENST00000470094 AAMDCQ9H7C9 122 aa4.39□□□□□ -1.71
BRCA2-202ENST00000470094 PDE11AQ9HCR9 933 aa4.39□□□□□ -1.71
BRCA2-202ENST00000470094 SEPSECSQ9HD40 501 aaKnown RBP4.39□□□□□ -1.71
BRCA2-202ENST00000470094 SEMA4BQ9NPR2 832 aaPredicted RBP4.39□□□□□ -1.71
BRCA2-202ENST00000470094 THSD1Q9NS62 852 aa4.39□□□□□ -1.71
BRCA2-202ENST00000470094 DECR2Q9NUI1 292 aa4.39□□□□□ -1.71
BRCA2-202ENST00000470094 MSRB1Q9NZV6 116 aa4.39□□□□□ -1.71
BRCA2-202ENST00000470094 LZTS1Q9Y250 596 aa4.39□□□□□ -1.71
BRCA2-202ENST00000470094 MYMKA6NI61 221 aa4.38□□□□□ -1.71
BRCA2-202ENST00000470094 MCIDASD6RGH6 385 aa4.38□□□□□ -1.71
BRCA2-202ENST00000470094 MSI1O43347 362 aaKnown RBP4.38□□□□□ -1.71
BRCA2-202ENST00000470094 ZC3H11AO75152 810 aaKnown RBP eCLIP4.38□□□□□ -1.71
BRCA2-202ENST00000470094 HEXIM1O94992 359 aaKnown RBP4.38□□□□□ -1.71
BRCA2-202ENST00000470094 SCP2P22307 547 aa4.38□□□□□ -1.71
BRCA2-202ENST00000470094 ALDH7A1P49419 539 aaKnown RBP4.38□□□□□ -1.71
BRCA2-202ENST00000470094 ADPRHP54922 357 aa4.38□□□□□ -1.71
BRCA2-202ENST00000470094 GALNT3Q14435 633 aa4.38□□□□□ -1.71
BRCA2-202ENST00000470094 INPP5JQ15735 1006 aaPredicted RBP4.38□□□□□ -1.71
BRCA2-202ENST00000470094 TIGD6Q17RP2 521 aa4.38□□□□□ -1.71
BRCA2-202ENST00000470094 ZNF260Q3ZCT1 412 aa4.38□□□□□ -1.71
BRCA2-202ENST00000470094 MANEAQ5SRI9 462 aa4.38□□□□□ -1.71
BRCA2-202ENST00000470094 COLCA1Q6ZS62 124 aa4.38□□□□□ -1.71
BRCA2-202ENST00000470094 MDGA2Q7Z553 956 aa4.38□□□□□ -1.71
BRCA2-202ENST00000470094 IRF2BP2Q7Z5L9 587 aa4.38□□□□□ -1.71
BRCA2-202ENST00000470094 PIM3Q86V86 326 aa4.38□□□□□ -1.71
BRCA2-202ENST00000470094 ENDOVQ8N8Q3 282 aaKnown RBP4.38□□□□□ -1.71
BRCA2-202ENST00000470094 EXD3Q8N9H8 876 aa4.38□□□□□ -1.71
BRCA2-202ENST00000470094 SLC2A12Q8TD20 617 aa4.38□□□□□ -1.71
BRCA2-202ENST00000470094 RUBCNQ92622 972 aa4.38□□□□□ -1.71
BRCA2-202ENST00000470094 CENPIQ92674 756 aaPredicted RBP4.38□□□□□ -1.71
BRCA2-202ENST00000470094 NLRP4Q96MN2 994 aa4.38□□□□□ -1.71
BRCA2-202ENST00000470094 DDX23Q9BUQ8 820 aaKnown RBP4.38□□□□□ -1.71
BRCA2-202ENST00000470094 TXNRD2Q9NNW7 524 aa4.38□□□□□ -1.71
BRCA2-202ENST00000470094 TMLHEQ9NVH6 421 aa4.38□□□□□ -1.71
BRCA2-202ENST00000470094 COG5Q9UP83 839 aa4.38□□□□□ -1.71
BRCA2-202ENST00000470094 LAMP3Q9UQV4 416 aa4.38□□□□□ -1.71
BRCA2-202ENST00000470094 IGLV5-39A0A0G2JS06 123 aa4.37□□□□□ -1.71
BRCA2-202ENST00000470094 CXorf65A6NEN9 183 aa4.37□□□□□ -1.71
BRCA2-202ENST00000470094 ZNF814B7Z6K7 855 aa4.37□□□□□ -1.71
BRCA2-202ENST00000470094 H0Y3Z8 333 aa4.37□□□□□ -1.71
BRCA2-202ENST00000470094 GRM8O00222 908 aa4.37□□□□□ -1.71
BRCA2-202ENST00000470094 HNRNPRO43390 633 aaKnown RBP4.37□□□□□ -1.71
BRCA2-202ENST00000470094 SYF2O95926 243 aaKnown RBP4.37□□□□□ -1.71
BRCA2-202ENST00000470094 WNT1P04628 370 aa4.37□□□□□ -1.71
BRCA2-202ENST00000470094 PSG1P11464 419 aa4.37□□□□□ -1.71
BRCA2-202ENST00000470094 STAT1P42224 750 aa4.37□□□□□ -1.71
BRCA2-202ENST00000470094 TRAPPC10P48553 1259 aa4.37□□□□□ -1.71
BRCA2-202ENST00000470094 GAD2Q05329 585 aa4.37□□□□□ -1.71
BRCA2-202ENST00000470094 SMTNL2Q2TAL5 461 aa4.37□□□□□ -1.71
BRCA2-202ENST00000470094 TUBB8Q3ZCM7 444 aa4.37□□□□□ -1.71
BRCA2-202ENST00000470094 ARL13AQ5H913 290 aaPredicted RBP4.37□□□□□ -1.71
BRCA2-202ENST00000470094 TTC39AQ5SRH9 613 aa4.37□□□□□ -1.71
BRCA2-202ENST00000470094 C6orf10Q5SRN2 563 aa4.37□□□□□ -1.71
BRCA2-202ENST00000470094 B4GALNT4Q76KP1 1039 aa4.37□□□□□ -1.71
BRCA2-202ENST00000470094 RTL10Q7L3V2 364 aa4.37□□□□□ -1.71
BRCA2-202ENST00000470094 ANKS1BQ7Z6G8 1248 aa4.37□□□□□ -1.71
BRCA2-202ENST00000470094 KLBQ86Z14 1044 aa4.37□□□□□ -1.71
BRCA2-202ENST00000470094 MYCT1Q8N699 235 aa4.37□□□□□ -1.71
BRCA2-202ENST00000470094 ZNF366Q8N895 744 aa4.37□□□□□ -1.71
BRCA2-202ENST00000470094 Q8N9P0 234 aaPredicted RBP4.37□□□□□ -1.71
BRCA2-202ENST00000470094 TRAPPC12Q8WVT3 735 aa4.37□□□□□ -1.71
BRCA2-202ENST00000470094 EME1Q96AY2 570 aa4.37□□□□□ -1.71
BRCA2-202ENST00000470094 ZBTB9Q96C00 473 aa4.37□□□□□ -1.71
BRCA2-202ENST00000470094 NPAS1Q99742 590 aa4.37□□□□□ -1.71
BRCA2-202ENST00000470094 WDR83Q9BRX9 315 aaKnown RBP4.37□□□□□ -1.71
BRCA2-202ENST00000470094 TAF1DQ9H5J8 278 aaPredicted RBP4.37□□□□□ -1.71
BRCA2-202ENST00000470094 SAYSD1Q9NPB0 183 aa4.37□□□□□ -1.71
BRCA2-202ENST00000470094 SLC25A13Q9UJS0 675 aa4.37□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 39.9 ms