RNA–Protein interactions for RNA: ENST00000469511.1

PTPN4-209, Transcript of protein tyrosine phosphatase, non-receptor type 4, humanhuman

TSL 3

Gene PTPN4, Length 476 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN4-209ENST00000469511 ITGA11Q9UKX5 1188 aa5.55□□□□□ -1.52
PTPN4-209ENST00000469511 ODF2LQ9ULJ1 636 aa5.55□□□□□ -1.52
PTPN4-209ENST00000469511 CLCA2Q9UQC9 943 aa5.55□□□□□ -1.52
PTPN4-209ENST00000469511 DOPEY1Q5JWR5 2465 aa5.55□□□□□ -1.52
PTPN4-209ENST00000469511 RELNP78509 3460 aa5.54□□□□□ -1.52
PTPN4-209ENST00000469511 BSNQ9UPA5 3926 aa5.54□□□□□ -1.52
PTPN4-209ENST00000469511 A0A1W2PP55 124 aa5.54□□□□□ -1.52
PTPN4-209ENST00000469511 A0A1W2PPC4 97 aa5.54□□□□□ -1.52
PTPN4-209ENST00000469511 FAM92AA1XBS5 289 aa5.54□□□□□ -1.52
PTPN4-209ENST00000469511 CAPN8A6NHC0 703 aa5.54□□□□□ -1.52
PTPN4-209ENST00000469511 ADARB2-AS1A8MUL3 147 aa5.54□□□□□ -1.52
PTPN4-209ENST00000469511 C10orf142B7Z368 130 aa5.54□□□□□ -1.52
PTPN4-209ENST00000469511 H0YCG3 227 aa5.54□□□□□ -1.52
PTPN4-209ENST00000469511 K7ENP7 123 aa5.54□□□□□ -1.52
PTPN4-209ENST00000469511 VILLO15195 856 aa5.54□□□□□ -1.52
PTPN4-209ENST00000469511 SIGLEC6O43699 453 aa5.54□□□□□ -1.52
PTPN4-209ENST00000469511 SYNCRIPO60506 623 aaKnown RBP5.54□□□□□ -1.52
PTPN4-209ENST00000469511 STC2O76061 302 aa5.54□□□□□ -1.52
PTPN4-209ENST00000469511 PRPF6O94906 941 aaKnown RBP5.54□□□□□ -1.52
PTPN4-209ENST00000469511 PENKP01210 267 aaPredicted RBP5.54□□□□□ -1.52
PTPN4-209ENST00000469511 HMBSP08397 361 aa5.54□□□□□ -1.52
PTPN4-209ENST00000469511 C1SP09871 688 aa5.54□□□□□ -1.52
PTPN4-209ENST00000469511 TMEM191BP0C7N4 346 aa5.54□□□□□ -1.52
PTPN4-209ENST00000469511 GIMD1P0DJR0 217 aa5.54□□□□□ -1.52
PTPN4-209ENST00000469511 ACADMP11310 421 aa5.54□□□□□ -1.52
PTPN4-209ENST00000469511 CCDC130P13994 396 aa5.54□□□□□ -1.52
PTPN4-209ENST00000469511 ABCB4P21439 1286 aa5.54□□□□□ -1.52
PTPN4-209ENST00000469511 ADH6P28332 368 aa5.54□□□□□ -1.52
PTPN4-209ENST00000469511 EPHA8P29322 1005 aaPredicted RBP5.54□□□□□ -1.52
PTPN4-209ENST00000469511 PRPHP41219 470 aa5.54□□□□□ -1.52
PTPN4-209ENST00000469511 TRAPPC10P48553 1259 aa5.54□□□□□ -1.52
PTPN4-209ENST00000469511 GALCP54803 685 aa5.54□□□□□ -1.52
PTPN4-209ENST00000469511 PCBP4P57723 403 aaKnown RBP5.54□□□□□ -1.52
PTPN4-209ENST00000469511 GABREP78334 506 aa5.54□□□□□ -1.52
PTPN4-209ENST00000469511 CAMK2GQ13555 558 aaPredicted RBP5.54□□□□□ -1.52
PTPN4-209ENST00000469511 SFMBT2Q5VUG0 894 aa5.54□□□□□ -1.52
PTPN4-209ENST00000469511 KIAA0895LQ68EN5 471 aa5.54□□□□□ -1.52
PTPN4-209ENST00000469511 INO80CQ6PI98 192 aaPredicted RBP5.54□□□□□ -1.52
PTPN4-209ENST00000469511 ADAT2Q7Z6V5 191 aaKnown RBP5.54□□□□□ -1.52
PTPN4-209ENST00000469511 SCD5Q86SK9 330 aa5.54□□□□□ -1.52
PTPN4-209ENST00000469511 FAM35AQ86V20 835 aa5.54□□□□□ -1.52
PTPN4-209ENST00000469511 NT5DC4Q86YG4 428 aa5.54□□□□□ -1.52
PTPN4-209ENST00000469511 CBWD2Q8IUF1 395 aa5.54□□□□□ -1.52
PTPN4-209ENST00000469511 FUKQ8N0W3 1084 aa5.54□□□□□ -1.52
PTPN4-209ENST00000469511 SLC25A45Q8N413 288 aa5.54□□□□□ -1.52
PTPN4-209ENST00000469511 B3GALNT2Q8NCR0 500 aa5.54□□□□□ -1.52
PTPN4-209ENST00000469511 OR2T3Q8NH03 318 aa5.54□□□□□ -1.52
PTPN4-209ENST00000469511 SNRNP27Q8WVK2 155 aaKnown RBP5.54□□□□□ -1.52
PTPN4-209ENST00000469511 KCNE4Q8WWG9 221 aa5.54□□□□□ -1.52
PTPN4-209ENST00000469511 RFFLQ8WZ73 363 aa5.54□□□□□ -1.52
PTPN4-209ENST00000469511 RAD54LQ92698 747 aa5.54□□□□□ -1.52
PTPN4-209ENST00000469511 JAKMIP2Q96AA8 810 aa5.54□□□□□ -1.52
PTPN4-209ENST00000469511 PRR11Q96HE9 360 aaPredicted RBP5.54□□□□□ -1.52
PTPN4-209ENST00000469511 VCPIP1Q96JH7 1222 aa5.54□□□□□ -1.52
PTPN4-209ENST00000469511 BACH2Q9BYV9 841 aa5.54□□□□□ -1.52
PTPN4-209ENST00000469511 CIPCQ9C0C6 399 aa5.54□□□□□ -1.52
PTPN4-209ENST00000469511 OSBPL2Q9H1P3 480 aa5.54□□□□□ -1.52
PTPN4-209ENST00000469511 PRSS16Q9NQE7 514 aa5.54□□□□□ -1.52
PTPN4-209ENST00000469511 LATS2Q9NRM7 1088 aa5.54□□□□□ -1.52
PTPN4-209ENST00000469511 UCKL1Q9NWZ5 548 aa5.54□□□□□ -1.52
PTPN4-209ENST00000469511 DNAJB12Q9NXW2 375 aaKnown RBP5.54□□□□□ -1.52
PTPN4-209ENST00000469511 KCND2Q9NZV8 630 aa5.54□□□□□ -1.52
PTPN4-209ENST00000469511 WDR35Q9P2L0 1181 aa5.54□□□□□ -1.52
PTPN4-209ENST00000469511 FAM8A1Q9UBU6 413 aa5.54□□□□□ -1.52
PTPN4-209ENST00000469511 VTI1BQ9UEU0 232 aa5.54□□□□□ -1.52
PTPN4-209ENST00000469511 HMGXB4Q9UGU5 601 aa5.54□□□□□ -1.52
PTPN4-209ENST00000469511 KLF15Q9UIH9 416 aa5.54□□□□□ -1.52
PTPN4-209ENST00000469511 KCNG1Q9UIX4 513 aa5.54□□□□□ -1.52
PTPN4-209ENST00000469511 CA5BQ9Y2D0 317 aa5.54□□□□□ -1.52
PTPN4-209ENST00000469511 SLC27A6Q9Y2P4 619 aa5.54□□□□□ -1.52
PTPN4-209ENST00000469511 ANKRD17O75179 2603 aaKnown RBP5.54□□□□□ -1.52
PTPN4-209ENST00000469511 ABCA12Q86UK0 2595 aa5.54□□□□□ -1.52
PTPN4-209ENST00000469511 A0A1W2PQH9 124 aa5.53□□□□□ -1.52
PTPN4-209ENST00000469511 HHLA1C9JL84 531 aa5.53□□□□□ -1.52
PTPN4-209ENST00000469511 CYP26A1O43174 497 aa5.53□□□□□ -1.52
PTPN4-209ENST00000469511 SUV39H1O43463 412 aa5.53□□□□□ -1.52
PTPN4-209ENST00000469511 GADD45BO75293 160 aaPredicted RBP5.53□□□□□ -1.52
PTPN4-209ENST00000469511 USP12O75317 370 aa5.53□□□□□ -1.52
PTPN4-209ENST00000469511 RTN3O95197 1032 aaPredicted RBP5.53□□□□□ -1.52
PTPN4-209ENST00000469511 KRT18P05783 430 aaKnown RBP5.53□□□□□ -1.52
PTPN4-209ENST00000469511 CENPBP07199 599 aaPredicted RBP5.53□□□□□ -1.52
PTPN4-209ENST00000469511 RARGP13631 454 aa5.53□□□□□ -1.52
PTPN4-209ENST00000469511 CKMT2P17540 419 aa5.53□□□□□ -1.52
PTPN4-209ENST00000469511 SGSHP51688 502 aa5.53□□□□□ -1.52
PTPN4-209ENST00000469511 METAP1P53582 386 aa5.53□□□□□ -1.52
PTPN4-209ENST00000469511 C21orf59P57076 290 aa5.53□□□□□ -1.52
PTPN4-209ENST00000469511 NXPH1P58417 271 aa5.53□□□□□ -1.52
PTPN4-209ENST00000469511 MYL6P60660 151 aa5.53□□□□□ -1.52
PTPN4-209ENST00000469511 RACK1P63244 317 aaKnown RBP5.53□□□□□ -1.52
PTPN4-209ENST00000469511 POU5F1Q01860 360 aaKnown RBP5.53□□□□□ -1.52
PTPN4-209ENST00000469511 MAPRE1Q15691 268 aaKnown RBP5.53□□□□□ -1.52
PTPN4-209ENST00000469511 IGFBP7Q16270 282 aa5.53□□□□□ -1.52
PTPN4-209ENST00000469511 TSNAXIP1Q2TAA8 658 aa5.53□□□□□ -1.52
PTPN4-209ENST00000469511 WDR72Q3MJ13 1102 aa5.53□□□□□ -1.52
PTPN4-209ENST00000469511 RNFT1Q5M7Z0 435 aa5.53□□□□□ -1.52
PTPN4-209ENST00000469511 CDCP2Q5VXM1 449 aa5.53□□□□□ -1.52
PTPN4-209ENST00000469511 NCEH1Q6PIU2 408 aa5.53□□□□□ -1.52
PTPN4-209ENST00000469511 SERPINA13PQ6UXR4 307 aa5.53□□□□□ -1.52
PTPN4-209ENST00000469511 TRAPPC11Q7Z392 1133 aa5.53□□□□□ -1.52
PTPN4-209ENST00000469511 TMC6Q7Z403 805 aa5.53□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms