RNA–Protein interactions for RNA: ENST00000469415.1

MCF2L-221, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 1 (best)

Gene MCF2L, Length 3,027 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-221ENST00000469415 IL31Q6EBC2 164 aa18.28■□□□□ 0.52
MCF2L-221ENST00000469415 TEX9Q8N6V9 391 aa18.28■□□□□ 0.52
MCF2L-221ENST00000469415 RBM15BQ8NDT2 890 aaKnown RBP18.28■□□□□ 0.52
MCF2L-221ENST00000469415 MAGEC3Q8TD91 643 aa18.28■□□□□ 0.52
MCF2L-221ENST00000469415 OLFM3Q96PB7 478 aa18.28■□□□□ 0.52
MCF2L-221ENST00000469415 PHACTR1Q9C0D0 580 aa18.28■□□□□ 0.52
MCF2L-221ENST00000469415 WDCPQ9H6R7 721 aa18.28■□□□□ 0.52
MCF2L-221ENST00000469415 SLC24A3Q9HC58 644 aa18.28■□□□□ 0.52
MCF2L-221ENST00000469415 PNPLA8Q9NP80 782 aa18.28■□□□□ 0.52
MCF2L-221ENST00000469415 MOCS1Q9NZB8 636 aa18.28■□□□□ 0.52
MCF2L-221ENST00000469415 OR12D3Q9UGF7 316 aa18.28■□□□□ 0.52
MCF2L-221ENST00000469415 GOLGA8QA0A0J9YX86 632 aa18.28■□□□□ 0.52
MCF2L-221ENST00000469415 GOLGA8OA6NCC3 632 aa18.28■□□□□ 0.52
MCF2L-221ENST00000469415 ARHGAP42A6NI28 874 aa18.28■□□□□ 0.52
MCF2L-221ENST00000469415 GOLGA8NF8WBI6 632 aa18.28■□□□□ 0.52
MCF2L-221ENST00000469415 BAG2O95816 211 aa18.28■□□□□ 0.52
MCF2L-221ENST00000469415 ZNF865P0CJ78 1059 aaPredicted RBP18.28■□□□□ 0.52
MCF2L-221ENST00000469415 PTPN3P26045 913 aa18.28■□□□□ 0.52
MCF2L-221ENST00000469415 EPHB1P54762 984 aa18.28■□□□□ 0.52
MCF2L-221ENST00000469415 SLC25A3Q00325 362 aa18.28■□□□□ 0.52
MCF2L-221ENST00000469415 MAP2K5Q13163 448 aa18.28■□□□□ 0.52
MCF2L-221ENST00000469415 C4orf50Q6ZRC1 276 aa18.28■□□□□ 0.52
MCF2L-221ENST00000469415 CFAP61Q8NHU2 1237 aa18.28■□□□□ 0.52
MCF2L-221ENST00000469415 GDAP2Q9NXN4 497 aa18.28■□□□□ 0.52
MCF2L-221ENST00000469415 EMCNQ9ULC0 261 aa18.28■□□□□ 0.52
MCF2L-221ENST00000469415 MBLAC1A4D2B0 266 aaPredicted RBP18.28■□□□□ 0.52
MCF2L-221ENST00000469415 SORBS2O94875 1100 aaKnown RBP18.28■□□□□ 0.52
MCF2L-221ENST00000469415 MT-CYBP00156 380 aaPredicted RBP18.28■□□□□ 0.52
MCF2L-221ENST00000469415 PNPLA4P41247 253 aa18.28■□□□□ 0.52
MCF2L-221ENST00000469415 PARP6Q2NL67 630 aa18.28■□□□□ 0.52
MCF2L-221ENST00000469415 RAPH1Q70E73 1250 aa18.28■□□□□ 0.52
MCF2L-221ENST00000469415 UPF1Q92900 1129 aaKnown RBP eCLIP18.28■□□□□ 0.523e-8■■■□□ 17
MCF2L-221ENST00000469415 PTCD3Q96EY7 689 aaKnown RBP18.28■□□□□ 0.52
MCF2L-221ENST00000469415 FERMT1Q9BQL6 677 aa18.28■□□□□ 0.52
MCF2L-221ENST00000469415 IARS2Q9NSE4 1012 aaKnown RBP18.28■□□□□ 0.52
MCF2L-221ENST00000469415 C20orf96Q9NUD7 363 aaPredicted RBP18.28■□□□□ 0.52
MCF2L-221ENST00000469415 SFMBT1Q9UHJ3 866 aa18.28■□□□□ 0.52
MCF2L-221ENST00000469415 WASF2Q9Y6W5 498 aa18.28■□□□□ 0.52
MCF2L-221ENST00000469415 NEMP1O14524 444 aa18.27■□□□□ 0.52
MCF2L-221ENST00000469415 PPP1R12AO14974 1030 aaPredicted RBP18.27■□□□□ 0.52
MCF2L-221ENST00000469415 PHGDHO43175 533 aaKnown RBP18.27■□□□□ 0.52
MCF2L-221ENST00000469415 POLBP06746 335 aa18.27■□□□□ 0.52
MCF2L-221ENST00000469415 THP07101 528 aa18.27■□□□□ 0.52
MCF2L-221ENST00000469415 TSHRP16473 764 aa18.27■□□□□ 0.52
MCF2L-221ENST00000469415 MAGEA3P43357 314 aa18.27■□□□□ 0.52
MCF2L-221ENST00000469415 LRRC36Q1X8D7 754 aa18.27■□□□□ 0.52
MCF2L-221ENST00000469415 TIGD5Q53EQ6 642 aa18.27■□□□□ 0.52
MCF2L-221ENST00000469415 ANKRD23Q86SG2 305 aa18.27■□□□□ 0.52
MCF2L-221ENST00000469415 DCLK2Q8N568 766 aa18.27■□□□□ 0.52
MCF2L-221ENST00000469415 GSTCDQ8NEC7 633 aa18.27■□□□□ 0.52
MCF2L-221ENST00000469415 ATP2A3Q93084 1043 aa18.27■□□□□ 0.52
MCF2L-221ENST00000469415 TTC1Q99614 292 aa18.27■□□□□ 0.52
MCF2L-221ENST00000469415 AGO3Q9H9G7 860 aaKnown RBP18.27■□□□□ 0.52
MCF2L-221ENST00000469415 RRAGCQ9HB90 399 aa18.27■□□□□ 0.52
MCF2L-221ENST00000469415 FAM105AQ9NUU6 356 aa18.27■□□□□ 0.52
MCF2L-221ENST00000469415 VANGL2Q9ULK5 521 aa18.27■□□□□ 0.52
MCF2L-221ENST00000469415 HBS1LQ9Y450 684 aaKnown RBP18.27■□□□□ 0.52
MCF2L-221ENST00000469415 M0QZ92 97 aa18.27■□□□□ 0.51
MCF2L-221ENST00000469415 DAB1O75553 588 aa18.27■□□□□ 0.51
MCF2L-221ENST00000469415 ARRB2P32121 409 aa18.27■□□□□ 0.51
MCF2L-221ENST00000469415 SLC1A6P48664 564 aa18.27■□□□□ 0.51
MCF2L-221ENST00000469415 PGFP49763 221 aa18.27■□□□□ 0.51
MCF2L-221ENST00000469415 OCRLQ01968 901 aa18.27■□□□□ 0.51
MCF2L-221ENST00000469415 ZNF460Q14592 562 aa18.27■□□□□ 0.51
MCF2L-221ENST00000469415 CERS2Q96G23 380 aa18.27■□□□□ 0.51
MCF2L-221ENST00000469415 ZNF180Q9UJW8 692 aa18.27■□□□□ 0.51
MCF2L-221ENST00000469415 SLC39A10Q9ULF5 831 aa18.27■□□□□ 0.51
MCF2L-221ENST00000469415 LRIG2O94898 1065 aa18.26■□□□□ 0.51
MCF2L-221ENST00000469415 LTFP02788 710 aa18.26■□□□□ 0.51
MCF2L-221ENST00000469415 CRYBB1P53674 252 aaPredicted RBP18.26■□□□□ 0.51
MCF2L-221ENST00000469415 DAOAP59103 153 aa18.26■□□□□ 0.51
MCF2L-221ENST00000469415 POU6F1Q14863 301 aa18.26■□□□□ 0.51
MCF2L-221ENST00000469415 MUM1Q2TAK8 710 aa18.26■□□□□ 0.51
MCF2L-221ENST00000469415 FAM219BQ5XKK7 198 aa18.26■□□□□ 0.51
MCF2L-221ENST00000469415 TLDC1Q6P9B6 456 aa18.26■□□□□ 0.51
MCF2L-221ENST00000469415 LRRC8BQ6P9F7 803 aa18.26■□□□□ 0.51
MCF2L-221ENST00000469415 ZNF467Q7Z7K2 595 aaPredicted RBP18.26■□□□□ 0.51
MCF2L-221ENST00000469415 STMN2Q93045 179 aa18.26■□□□□ 0.51
MCF2L-221ENST00000469415 LRRC39Q96DD0 335 aa18.26■□□□□ 0.51
MCF2L-221ENST00000469415 SGF29Q96ES7 293 aa18.26■□□□□ 0.51
MCF2L-221ENST00000469415 FRMD8Q9BZ67 464 aaPredicted RBP18.26■□□□□ 0.51
MCF2L-221ENST00000469415 FIS1Q9Y3D6 152 aa18.26■□□□□ 0.51
MCF2L-221ENST00000469415 IQCA1LA6NCM1 817 aa18.26■□□□□ 0.51
MCF2L-221ENST00000469415 TNPO2O14787 897 aaKnown RBP18.26■□□□□ 0.51
MCF2L-221ENST00000469415 ITGB1P05556 798 aa18.26■□□□□ 0.51
MCF2L-221ENST00000469415 CD52P31358 61 aa18.26■□□□□ 0.51
MCF2L-221ENST00000469415 CRHR1P34998 444 aa18.26■□□□□ 0.51
MCF2L-221ENST00000469415 FDFT1P37268 417 aa18.26■□□□□ 0.51
MCF2L-221ENST00000469415 SCN4BQ8IWT1 228 aa18.26■□□□□ 0.51
MCF2L-221ENST00000469415 IPMKQ8NFU5 416 aa18.26■□□□□ 0.51
MCF2L-221ENST00000469415 GPR152Q8TDT2 470 aa18.26■□□□□ 0.51
MCF2L-221ENST00000469415 COLEC11Q9BWP8 271 aa18.26■□□□□ 0.51
MCF2L-221ENST00000469415 BFARQ9NZS9 450 aa18.26■□□□□ 0.51
MCF2L-221ENST00000469415 SIRPGQ9P1W8 387 aa18.26■□□□□ 0.51
MCF2L-221ENST00000469415 LOC285556D6RIA3 1793 aa18.26■□□□□ 0.51
MCF2L-221ENST00000469415 ZNF638Q14966 1978 aaKnown RBP18.26■□□□□ 0.51
MCF2L-221ENST00000469415 ARL5CA6NH57 179 aa18.25■□□□□ 0.51
MCF2L-221ENST00000469415 OPHN1O60890 802 aa18.25■□□□□ 0.51
MCF2L-221ENST00000469415 KCNE1P15382 129 aa18.25■□□□□ 0.51
MCF2L-221ENST00000469415 CD1EP15812 388 aa18.25■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms