RNA–Protein interactions for RNA: ENST00000469163.1

NUP50-214, Transcript of nucleoporin 50, humanhuman

TSL 2

Gene NUP50, Length 3,507 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-214ENST00000469163 CELF4Q9BZC1 486 aaKnown RBP10.19□□□□□ -0.78
NUP50-214ENST00000469163 KCTD10Q9H3F6 313 aa10.19□□□□□ -0.78
NUP50-214ENST00000469163 POLIQ9UNA4 740 aa10.19□□□□□ -0.78
NUP50-214ENST00000469163 TRIOBPQ9H2D6 2365 aa10.18□□□□□ -0.78
NUP50-214ENST00000469163 IGSF9BQ9UPX0 1349 aa10.18□□□□□ -0.78
NUP50-214ENST00000469163 MCM3APO60318 1980 aa10.18□□□□□ -0.78
NUP50-214ENST00000469163 TYW5A2RUC4 315 aaKnown RBP10.18□□□□□ -0.78
NUP50-214ENST00000469163 CENPBD1B2RD01 187 aa10.18□□□□□ -0.78
NUP50-214ENST00000469163 TK2O00142 265 aa10.18□□□□□ -0.78
NUP50-214ENST00000469163 SCAMP3O14828 347 aaKnown RBP10.18□□□□□ -0.78
NUP50-214ENST00000469163 RNASEH2AO75792 299 aaKnown RBP10.18□□□□□ -0.78
NUP50-214ENST00000469163 MAP3K6O95382 1288 aa10.18□□□□□ -0.78
NUP50-214ENST00000469163 NAGAP17050 411 aa10.18□□□□□ -0.78
NUP50-214ENST00000469163 POLR2CP19387 275 aaPredicted RBP10.18□□□□□ -0.78
NUP50-214ENST00000469163 ADORA2BP29275 332 aa10.18□□□□□ -0.78
NUP50-214ENST00000469163 CTGFP29279 349 aa10.18□□□□□ -0.78
NUP50-214ENST00000469163 PMLP29590 882 aa10.18□□□□□ -0.78
NUP50-214ENST00000469163 ADSSP30520 456 aa10.18□□□□□ -0.78
NUP50-214ENST00000469163 CBX5P45973 191 aa10.18□□□□□ -0.78
NUP50-214ENST00000469163 PLTPP55058 493 aa10.18□□□□□ -0.78
NUP50-214ENST00000469163 ARHGAP1Q07960 439 aa10.18□□□□□ -0.78
NUP50-214ENST00000469163 DNAJC3Q13217 504 aa10.18□□□□□ -0.78
NUP50-214ENST00000469163 PPP2R5EQ16537 467 aa10.18□□□□□ -0.78
NUP50-214ENST00000469163 ZNF699Q32M78 642 aa10.18□□□□□ -0.78
NUP50-214ENST00000469163 ANKRD20A4Q4UJ75 823 aa10.18□□□□□ -0.78
NUP50-214ENST00000469163 CLVS2Q5SYC1 327 aa10.18□□□□□ -0.78
NUP50-214ENST00000469163 PLEKHA7Q6IQ23 1121 aa10.18□□□□□ -0.78
NUP50-214ENST00000469163 NANOGP8Q6NSW7 305 aa10.18□□□□□ -0.78
NUP50-214ENST00000469163 RGS9BPQ6ZS82 235 aa10.18□□□□□ -0.78
NUP50-214ENST00000469163 TICAM1Q8IUC6 712 aa10.18□□□□□ -0.78
NUP50-214ENST00000469163 CCDC28AQ8IWP9 274 aa10.18□□□□□ -0.78
NUP50-214ENST00000469163 POU5F2Q8N7G0 328 aa10.18□□□□□ -0.78
NUP50-214ENST00000469163 USP38Q8NB14 1042 aa10.18□□□□□ -0.78
NUP50-214ENST00000469163 PCYOX1LQ8NBM8 494 aa10.18□□□□□ -0.78
NUP50-214ENST00000469163 UNKQ9C0B0 810 aaKnown RBP10.18□□□□□ -0.78
NUP50-214ENST00000469163 NXF3Q9H4D5 531 aaKnown RBP10.18□□□□□ -0.78
NUP50-214ENST00000469163 VPS37BQ9H9H4 285 aa10.18□□□□□ -0.78
NUP50-214ENST00000469163 ANKEF1Q9NU02 776 aa10.18□□□□□ -0.78
NUP50-214ENST00000469163 AJAP1Q9UKB5 411 aaPredicted RBP10.18□□□□□ -0.78
NUP50-214ENST00000469163 ZNF646O15015 1829 aaPredicted RBP10.18□□□□□ -0.78
NUP50-214ENST00000469163 C5orf42Q9H799 3197 aa10.18□□□□□ -0.78
NUP50-214ENST00000469163 ZNF263O14978 683 aa10.18□□□□□ -0.78
NUP50-214ENST00000469163 CA12O43570 354 aa10.18□□□□□ -0.78
NUP50-214ENST00000469163 PALMO75781 387 aa10.18□□□□□ -0.78
NUP50-214ENST00000469163 HLA-DRAP01903 254 aa10.18□□□□□ -0.78
NUP50-214ENST00000469163 MMP3P08254 477 aa10.18□□□□□ -0.78
NUP50-214ENST00000469163 POLR2BP30876 1174 aaKnown RBP10.18□□□□□ -0.78
NUP50-214ENST00000469163 HNF1BP35680 557 aa10.18□□□□□ -0.78
NUP50-214ENST00000469163 PON2Q15165 354 aa10.18□□□□□ -0.78
NUP50-214ENST00000469163 CGB2Q6NT52 195 aa10.18□□□□□ -0.78
NUP50-214ENST00000469163 MTDHQ86UE4 582 aaKnown RBP10.18□□□□□ -0.78
NUP50-214ENST00000469163 LRRC6Q86X45 466 aa10.18□□□□□ -0.78
NUP50-214ENST00000469163 RELL1Q8IUW5 271 aa10.18□□□□□ -0.78
NUP50-214ENST00000469163 ICA1LQ8NDH6 482 aa10.18□□□□□ -0.78
NUP50-214ENST00000469163 ATP2A3Q93084 1043 aa10.18□□□□□ -0.78
NUP50-214ENST00000469163 FAM149B1Q96BN6 582 aa10.18□□□□□ -0.78
NUP50-214ENST00000469163 GRAMD1AQ96CP6 724 aa10.18□□□□□ -0.78
NUP50-214ENST00000469163 MAP6Q96JE9 813 aa10.18□□□□□ -0.78
NUP50-214ENST00000469163 FAM167AQ96KS9 214 aa10.18□□□□□ -0.78
NUP50-214ENST00000469163 CNBD2Q96M20 576 aa10.18□□□□□ -0.78
NUP50-214ENST00000469163 SEMA4AQ9H3S1 761 aa10.18□□□□□ -0.78
NUP50-214ENST00000469163 STARD7Q9NQZ5 370 aa10.18□□□□□ -0.78
NUP50-214ENST00000469163 BCAP29Q9UHQ4 241 aa10.18□□□□□ -0.78
NUP50-214ENST00000469163 NOSIPQ9Y314 301 aaKnown RBP10.18□□□□□ -0.78
NUP50-214ENST00000469163 C17orf102A2RUQ5 167 aa10.17□□□□□ -0.78
NUP50-214ENST00000469163 FOXO6A8MYZ6 492 aa10.17□□□□□ -0.78
NUP50-214ENST00000469163 B8ZZF3 427 aa10.17□□□□□ -0.78
NUP50-214ENST00000469163 KRIT1O00522 736 aa10.17□□□□□ -0.78
NUP50-214ENST00000469163 CLOCKO15516 846 aa10.17□□□□□ -0.78
NUP50-214ENST00000469163 EPN2O95208 641 aa10.17□□□□□ -0.78
NUP50-214ENST00000469163 FKBP9O95302 570 aa10.17□□□□□ -0.78
NUP50-214ENST00000469163 BMP10O95393 424 aa10.17□□□□□ -0.78
NUP50-214ENST00000469163 SGPL1O95470 568 aa10.17□□□□□ -0.78
NUP50-214ENST00000469163 KRT6AP02538 564 aa10.17□□□□□ -0.78
NUP50-214ENST00000469163 KRT6BP04259 564 aa10.17□□□□□ -0.78
NUP50-214ENST00000469163 CCDC130P13994 396 aa10.17□□□□□ -0.78
NUP50-214ENST00000469163 AKR1A1P14550 325 aa10.17□□□□□ -0.78
NUP50-214ENST00000469163 CPA2P48052 419 aa10.17□□□□□ -0.78
NUP50-214ENST00000469163 SLC9A3P48764 834 aa10.17□□□□□ -0.78
NUP50-214ENST00000469163 WNT7BP56706 349 aa10.17□□□□□ -0.78
NUP50-214ENST00000469163 DYNLT1P63172 113 aa10.17□□□□□ -0.78
NUP50-214ENST00000469163 PTK2BQ14289 1009 aa10.17□□□□□ -0.78
NUP50-214ENST00000469163 GRM2Q14416 872 aa10.17□□□□□ -0.78
NUP50-214ENST00000469163 C1orf146Q5VVC0 180 aa10.17□□□□□ -0.78
NUP50-214ENST00000469163 DCUN1D2Q6PH85 259 aa10.17□□□□□ -0.78
NUP50-214ENST00000469163 CKAP2Q8WWK9 683 aa10.17□□□□□ -0.78
NUP50-214ENST00000469163 SCLYQ96I15 445 aa10.17□□□□□ -0.78
NUP50-214ENST00000469163 METTL2AQ96IZ6 378 aaKnown RBP10.17□□□□□ -0.78
NUP50-214ENST00000469163 MED10Q9BTT4 135 aa10.17□□□□□ -0.78
NUP50-214ENST00000469163 GCOM2Q9BZD3 368 aaPredicted RBP10.17□□□□□ -0.78
NUP50-214ENST00000469163 TMEM117Q9H0C3 514 aa10.17□□□□□ -0.78
NUP50-214ENST00000469163 RBM38Q9H0Z9 239 aaKnown RBP10.17□□□□□ -0.78
NUP50-214ENST00000469163 NOL6Q9H6R4 1146 aaKnown RBP10.17□□□□□ -0.78
NUP50-214ENST00000469163 AIPL1Q9NZN9 384 aa10.17□□□□□ -0.78
NUP50-214ENST00000469163 CAPN11Q9UMQ6 739 aa10.17□□□□□ -0.78
NUP50-214ENST00000469163 SQORQ9Y6N5 450 aa10.17□□□□□ -0.78
NUP50-214ENST00000469163 MEIS3P2A8K0S8 358 aa10.17□□□□□ -0.78
NUP50-214ENST00000469163 ITM2AO43736 263 aa10.17□□□□□ -0.78
NUP50-214ENST00000469163 PHF2O75151 1096 aa10.17□□□□□ -0.78
NUP50-214ENST00000469163 CST3P01034 146 aaPredicted RBP10.17□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 45.3 ms