RNA–Protein interactions for RNA: ENST00000468371.5

SHQ1-205, Transcript of SHQ1, H/ACA ribonucleoprotein assembly factor, humanhuman

TSL 1 (best)

Gene SHQ1, Length 4,024 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHQ1-205ENST00000468371 HDDC3Q8N4P3 179 aa6.17□□□□□ -1.42
SHQ1-205ENST00000468371 CCDC33Q8N5R6 958 aa6.17□□□□□ -1.42
SHQ1-205ENST00000468371 TRAF3IP1Q8TDR0 691 aaPredicted RBP6.17□□□□□ -1.42
SHQ1-205ENST00000468371 ATG4AQ8WYN0 398 aa6.17□□□□□ -1.42
SHQ1-205ENST00000468371 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP6.17□□□□□ -1.42
SHQ1-205ENST00000468371 CD101Q93033 1021 aa6.17□□□□□ -1.42
SHQ1-205ENST00000468371 ERLEC1Q96DZ1 483 aa6.17□□□□□ -1.42
SHQ1-205ENST00000468371 FAM84AQ96KN4 292 aa6.17□□□□□ -1.42
SHQ1-205ENST00000468371 CALR3Q96L12 384 aaKnown RBP6.17□□□□□ -1.42
SHQ1-205ENST00000468371 SH3GL3Q99963 347 aa6.17□□□□□ -1.42
SHQ1-205ENST00000468371 KDM4CQ9H3R0 1056 aa6.17□□□□□ -1.42
SHQ1-205ENST00000468371 BATF3Q9NR55 127 aa6.17□□□□□ -1.42
SHQ1-205ENST00000468371 IPO11Q9UI26 975 aaKnown RBP6.17□□□□□ -1.42
SHQ1-205ENST00000468371 CDV3Q9UKY7 258 aaKnown RBP6.17□□□□□ -1.42
SHQ1-205ENST00000468371 ZNF510Q9Y2H8 683 aa6.17□□□□□ -1.42
SHQ1-205ENST00000468371 RLFQ13129 1914 aa6.17□□□□□ -1.42
SHQ1-205ENST00000468371 A0A0G2JMZ2 1700 aa6.17□□□□□ -1.42
SHQ1-205ENST00000468371 M0QZQ0 153 aa6.17□□□□□ -1.42
SHQ1-205ENST00000468371 MAP3K7O43318 606 aa6.17□□□□□ -1.42
SHQ1-205ENST00000468371 ADRB2P07550 413 aa6.17□□□□□ -1.42
SHQ1-205ENST00000468371 KITP10721 976 aa6.17□□□□□ -1.42
SHQ1-205ENST00000468371 GNSP15586 552 aa6.17□□□□□ -1.42
SHQ1-205ENST00000468371 NPR3P17342 541 aa6.17□□□□□ -1.42
SHQ1-205ENST00000468371 CDR2Q01850 454 aa6.17□□□□□ -1.42
SHQ1-205ENST00000468371 BST2Q10589 180 aaKnown RBP6.17□□□□□ -1.42
SHQ1-205ENST00000468371 DHX34Q14147 1143 aaKnown RBP6.17□□□□□ -1.42
SHQ1-205ENST00000468371 C2CD6Q53TS8 623 aa6.17□□□□□ -1.42
SHQ1-205ENST00000468371 EOGTQ5NDL2 527 aa6.17□□□□□ -1.42
SHQ1-205ENST00000468371 RWDD4Q6NW29 188 aaKnown RBP6.17□□□□□ -1.42
SHQ1-205ENST00000468371 TMEM184AQ6ZMB5 413 aa6.17□□□□□ -1.42
SHQ1-205ENST00000468371 RALGPS2Q86X27 583 aaPredicted RBP6.17□□□□□ -1.42
SHQ1-205ENST00000468371 C3orf58Q8NDZ4 430 aa6.17□□□□□ -1.42
SHQ1-205ENST00000468371 LRRC15Q8TF66 581 aa6.17□□□□□ -1.42
SHQ1-205ENST00000468371 HMGB4Q8WW32 186 aa6.17□□□□□ -1.42
SHQ1-205ENST00000468371 MAIP1Q8WWC4 291 aa6.17□□□□□ -1.42
SHQ1-205ENST00000468371 BAP1Q92560 729 aa6.17□□□□□ -1.42
SHQ1-205ENST00000468371 TATDN2Q93075 761 aa6.17□□□□□ -1.42
SHQ1-205ENST00000468371 TMEM237Q96Q45 408 aa6.17□□□□□ -1.42
SHQ1-205ENST00000468371 MAK16Q9BXY0 300 aaKnown RBP6.17□□□□□ -1.42
SHQ1-205ENST00000468371 ZCWPW1Q9H0M4 648 aa6.17□□□□□ -1.42
SHQ1-205ENST00000468371 NEUROG2Q9H2A3 272 aa6.17□□□□□ -1.42
SHQ1-205ENST00000468371 NPHS2Q9NP85 383 aa6.17□□□□□ -1.42
SHQ1-205ENST00000468371 CNOT1A5YKK6 2376 aaKnown RBP6.17□□□□□ -1.42
SHQ1-205ENST00000468371 MIF4GDA9UHW6 222 aaKnown RBP6.16□□□□□ -1.42
SHQ1-205ENST00000468371 PPP1R12AO14974 1030 aaPredicted RBP6.16□□□□□ -1.42
SHQ1-205ENST00000468371 CHADO15335 359 aa6.16□□□□□ -1.42
SHQ1-205ENST00000468371 CYP26A1O43174 497 aa6.16□□□□□ -1.42
SHQ1-205ENST00000468371 TSPAN3O60637 253 aa6.16□□□□□ -1.42
SHQ1-205ENST00000468371 PFDN1O60925 122 aa6.16□□□□□ -1.42
SHQ1-205ENST00000468371 ECI2O75521 394 aa6.16□□□□□ -1.42
SHQ1-205ENST00000468371 AKAP3O75969 853 aa6.16□□□□□ -1.42
SHQ1-205ENST00000468371 RNF8O76064 485 aa6.16□□□□□ -1.42
SHQ1-205ENST00000468371 FBXO21O94952 628 aa6.16□□□□□ -1.42
SHQ1-205ENST00000468371 SEC24AO95486 1093 aa6.16□□□□□ -1.42
SHQ1-205ENST00000468371 ZBED1O96006 694 aa6.16□□□□□ -1.42
SHQ1-205ENST00000468371 C1RP00736 705 aa6.16□□□□□ -1.42
SHQ1-205ENST00000468371 WARSP23381 471 aaKnown RBP6.16□□□□□ -1.42
SHQ1-205ENST00000468371 ADSSP30520 456 aa6.16□□□□□ -1.42
SHQ1-205ENST00000468371 TIE1P35590 1138 aa6.16□□□□□ -1.42
SHQ1-205ENST00000468371 CAMK1Q14012 370 aa6.16□□□□□ -1.42
SHQ1-205ENST00000468371 SMAD1Q15797 465 aaKnown RBP6.16□□□□□ -1.42
SHQ1-205ENST00000468371 SOWAHAQ2M3V2 549 aa6.16□□□□□ -1.42
SHQ1-205ENST00000468371 CASC4Q6P4E1 433 aa6.16□□□□□ -1.42
SHQ1-205ENST00000468371 HFE2Q6ZVN8 426 aa6.16□□□□□ -1.42
SHQ1-205ENST00000468371 CARNMT1Q8N4J0 409 aa6.16□□□□□ -1.42
SHQ1-205ENST00000468371 ATP6V0D2Q8N8Y2 350 aa6.16□□□□□ -1.42
SHQ1-205ENST00000468371 DTWD2Q8NBA8 298 aa6.16□□□□□ -1.42
SHQ1-205ENST00000468371 MIPOL1Q8TD10 442 aa6.16□□□□□ -1.42
SHQ1-205ENST00000468371 ACTRT1Q8TDG2 376 aa6.16□□□□□ -1.42
SHQ1-205ENST00000468371 ELMO3Q96BJ8 720 aa6.16□□□□□ -1.42
SHQ1-205ENST00000468371 MSANTD3Q96H12 275 aa6.16□□□□□ -1.42
SHQ1-205ENST00000468371 MSLNLQ96KJ4 702 aa6.16□□□□□ -1.42
SHQ1-205ENST00000468371 CYP2S1Q96SQ9 504 aa6.16□□□□□ -1.42
SHQ1-205ENST00000468371 DUSP12Q9UNI6 340 aa6.16□□□□□ -1.42
SHQ1-205ENST00000468371 C15orf41Q9Y2V0 281 aa6.16□□□□□ -1.42
SHQ1-205ENST00000468371 KIAA1217Q5T5P2 1943 aa6.16□□□□□ -1.42
SHQ1-205ENST00000468371 TCF20Q9UGU0 1960 aaKnown RBP6.16□□□□□ -1.42
SHQ1-205ENST00000468371 FOXO6A8MYZ6 492 aa6.16□□□□□ -1.42
SHQ1-205ENST00000468371 RBAK-RBAKDNI3L0D1 243 aa6.16□□□□□ -1.42
SHQ1-205ENST00000468371 PHF2O75151 1096 aa6.16□□□□□ -1.42
SHQ1-205ENST00000468371 CST3P01034 146 aaPredicted RBP6.16□□□□□ -1.42
SHQ1-205ENST00000468371 POLR2EP19388 210 aaKnown RBP6.16□□□□□ -1.42
SHQ1-205ENST00000468371 PROZP22891 400 aa6.16□□□□□ -1.42
SHQ1-205ENST00000468371 LMO2P25791 158 aa6.16□□□□□ -1.42
SHQ1-205ENST00000468371 CPA2P48052 419 aa6.16□□□□□ -1.42
SHQ1-205ENST00000468371 OVGP1Q12889 678 aa6.16□□□□□ -1.42
SHQ1-205ENST00000468371 DCAF6Q58WW2 860 aa6.16□□□□□ -1.42
SHQ1-205ENST00000468371 CEP128Q6ZU80 1094 aa6.16□□□□□ -1.42
SHQ1-205ENST00000468371 ANKMY2Q8IV38 441 aa6.16□□□□□ -1.42
SHQ1-205ENST00000468371 BBS5Q8N3I7 341 aa6.16□□□□□ -1.42
SHQ1-205ENST00000468371 EDEM1Q92611 657 aa6.16□□□□□ -1.42
SHQ1-205ENST00000468371 DNASE1L2Q92874 299 aa6.16□□□□□ -1.42
SHQ1-205ENST00000468371 ABTB1Q969K4 478 aaPredicted RBP6.16□□□□□ -1.42
SHQ1-205ENST00000468371 AGPAT1Q99943 283 aa6.16□□□□□ -1.42
SHQ1-205ENST00000468371 MUC3BQ9H195 1237 aa6.16□□□□□ -1.42
SHQ1-205ENST00000468371 METTL5Q9NRN9 209 aaKnown RBP6.16□□□□□ -1.42
SHQ1-205ENST00000468371 GDAP2Q9NXN4 497 aa6.16□□□□□ -1.42
SHQ1-205ENST00000468371 GMIPQ9P107 970 aa6.16□□□□□ -1.42
SHQ1-205ENST00000468371 STOML1Q9UBI4 398 aa6.16□□□□□ -1.42
SHQ1-205ENST00000468371 MCM8Q9UJA3 840 aa6.16□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms