RNA–Protein interactions for RNA: ENST00000468211.6

PTCH1-210, Transcript of patched 1, humanhuman

TSL 1 (best) BASIC

Gene PTCH1, Length 1,254 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-210ENST00000468211 TTC31Q49AM3 519 aaPredicted RBP25.31■■□□□ 1.64
PTCH1-210ENST00000468211 KCNT1Q5JUK3 1230 aa25.31■■□□□ 1.64
PTCH1-210ENST00000468211 DEFB106AQ8N104 65 aa25.31■■□□□ 1.64
PTCH1-210ENST00000468211 TRIM62Q9BVG3 475 aa25.31■■□□□ 1.64
PTCH1-210ENST00000468211 FBXL12Q9NXK8 326 aa25.31■■□□□ 1.64
PTCH1-210ENST00000468211 KIAA1522Q9P206 1035 aaPredicted RBP25.31■■□□□ 1.64
PTCH1-210ENST00000468211 FAM221BA6H8Z2 402 aa25.3■■□□□ 1.64
PTCH1-210ENST00000468211 KCNU1A8MYU2 1149 aa25.3■■□□□ 1.64
PTCH1-210ENST00000468211 KCNK3O14649 394 aa25.3■■□□□ 1.64
PTCH1-210ENST00000468211 MID1O15344 667 aa25.3■■□□□ 1.64
PTCH1-210ENST00000468211 GRAP2O75791 330 aa25.3■■□□□ 1.64
PTCH1-210ENST00000468211 STK19P49842 368 aaPredicted RBP25.3■■□□□ 1.64
PTCH1-210ENST00000468211 UBE2HP62256 183 aa25.3■■□□□ 1.64
PTCH1-210ENST00000468211 EXOC3L4Q17RC7 722 aa25.3■■□□□ 1.64
PTCH1-210ENST00000468211 IL27RAQ6UWB1 636 aa25.3■■□□□ 1.64
PTCH1-210ENST00000468211 SLCO6A1Q86UG4 719 aa25.3■■□□□ 1.64
PTCH1-210ENST00000468211 MMAAQ8IVH4 418 aaKnown RBP25.3■■□□□ 1.64
PTCH1-210ENST00000468211 KDM1BQ8NB78 822 aa25.3■■□□□ 1.64
PTCH1-210ENST00000468211 SETD7Q8WTS6 366 aaKnown RBP25.3■■□□□ 1.64
PTCH1-210ENST00000468211 RPL10LQ96L21 214 aaKnown RBP25.3■■□□□ 1.64
PTCH1-210ENST00000468211 SLC2A13Q96QE2 648 aa25.3■■□□□ 1.64
PTCH1-210ENST00000468211 FAM129BQ96TA1 746 aa25.3■■□□□ 1.64
PTCH1-210ENST00000468211 SYNJ2BP-COX16A0A087WUM0 186 aa25.29■■□□□ 1.64
PTCH1-210ENST00000468211 SRPRAP08240 638 aaKnown RBP25.29■■□□□ 1.64
PTCH1-210ENST00000468211 PNMA6AP0CW24 399 aaPredicted RBP25.29■■□□□ 1.64
PTCH1-210ENST00000468211 CD27P26842 260 aa25.29■■□□□ 1.64
PTCH1-210ENST00000468211 ECT2LQ008S8 904 aa25.29■■□□□ 1.64
PTCH1-210ENST00000468211 CST6Q15828 149 aa25.29■■□□□ 1.64
PTCH1-210ENST00000468211 DBX2Q6ZNG2 339 aa25.29■■□□□ 1.64
PTCH1-210ENST00000468211 USP30Q70CQ3 517 aa25.29■■□□□ 1.64
PTCH1-210ENST00000468211 CCDC117Q8IWD4 279 aaPredicted RBP25.29■■□□□ 1.64
PTCH1-210ENST00000468211 BAHD1Q8TBE0 780 aaPredicted RBP25.29■■□□□ 1.64
PTCH1-210ENST00000468211 GANCQ8TET4 914 aa25.29■■□□□ 1.64
PTCH1-210ENST00000468211 ADAMTS14Q8WXS8 1223 aa25.29■■□□□ 1.64
PTCH1-210ENST00000468211 PPP1R13BQ96KQ4 1090 aa25.29■■□□□ 1.64
PTCH1-210ENST00000468211 NEUROG2Q9H2A3 272 aa25.29■■□□□ 1.64
PTCH1-210ENST00000468211 FAM204AQ9H8W3 233 aa25.29■■□□□ 1.64
PTCH1-210ENST00000468211 EBF2Q9HAK2 575 aa25.29■■□□□ 1.64
PTCH1-210ENST00000468211 OSGEPQ9NPF4 335 aa25.29■■□□□ 1.64
PTCH1-210ENST00000468211 SLTMQ9NWH9 1034 aaKnown RBP eCLIP25.29■■□□□ 1.64
PTCH1-210ENST00000468211 COX16Q9P0S2 106 aa25.29■■□□□ 1.64
PTCH1-210ENST00000468211 PCDHGC3Q9UN70 934 aa25.29■■□□□ 1.64
PTCH1-210ENST00000468211 BTBD3Q9Y2F9 522 aa25.29■■□□□ 1.64
PTCH1-210ENST00000468211 ANKRD6Q9Y2G4 727 aa25.29■■□□□ 1.64
PTCH1-210ENST00000468211 ITIH6Q6UXX5 1313 aa25.29■■□□□ 1.64
PTCH1-210ENST00000468211 DOCK9Q9BZ29 2069 aa25.28■■□□□ 1.64
PTCH1-210ENST00000468211 A0A1W2PP55 124 aa25.28■■□□□ 1.64
PTCH1-210ENST00000468211 GTPBP10A4D1E9 387 aaKnown RBP25.28■■□□□ 1.64
PTCH1-210ENST00000468211 TMEM8BA6NDV4 472 aa25.28■■□□□ 1.64
PTCH1-210ENST00000468211 FAM47DPA6NHR8 397 aa25.28■■□□□ 1.64
PTCH1-210ENST00000468211 MZF1P28698 734 aaPredicted RBP25.28■■□□□ 1.64
PTCH1-210ENST00000468211 IRAK1P51617 712 aa25.28■■□□□ 1.64
PTCH1-210ENST00000468211 GALCP54803 685 aa25.28■■□□□ 1.64
PTCH1-210ENST00000468211 KIAA0895LQ68EN5 471 aa25.28■■□□□ 1.64
PTCH1-210ENST00000468211 FAM183BPQ6ZVS7 135 aa25.28■■□□□ 1.64
PTCH1-210ENST00000468211 GLRX5Q86SX6 157 aa25.28■■□□□ 1.64
PTCH1-210ENST00000468211 CCAR2Q8N163 923 aaKnown RBP25.28■■□□□ 1.64
PTCH1-210ENST00000468211 ATP6V0D2Q8N8Y2 350 aa25.28■■□□□ 1.64
PTCH1-210ENST00000468211 C1orf131Q8NDD1 294 aaKnown RBP25.28■■□□□ 1.64
PTCH1-210ENST00000468211 ZCCHC14Q8WYQ9 949 aaKnown RBP25.28■■□□□ 1.64
PTCH1-210ENST00000468211 PTPRN2Q92932 1015 aa25.28■■□□□ 1.64
PTCH1-210ENST00000468211 FAM81BQ96LP2 452 aa25.28■■□□□ 1.64
PTCH1-210ENST00000468211 DDIT4Q9NX09 232 aa25.28■■□□□ 1.64
PTCH1-210ENST00000468211 NCKAP1Q9Y2A7 1128 aa25.28■■□□□ 1.64
PTCH1-210ENST00000468211 PKD1L2Q7Z442 2459 aa25.27■■□□□ 1.64
PTCH1-210ENST00000468211 TARSL2A2RTX5 802 aaKnown RBP25.27■■□□□ 1.64
PTCH1-210ENST00000468211 F5H5T6 163 aa25.27■■□□□ 1.64
PTCH1-210ENST00000468211 FOXN3O00409 490 aaPredicted RBP25.27■■□□□ 1.64
PTCH1-210ENST00000468211 MOCS3O95396 460 aa25.27■■□□□ 1.64
PTCH1-210ENST00000468211 ERBB2P04626 1255 aa25.27■■□□□ 1.64
PTCH1-210ENST00000468211 VAV1P15498 845 aa25.27■■□□□ 1.64
PTCH1-210ENST00000468211 RDXP35241 583 aaKnown RBP25.27■■□□□ 1.64
PTCH1-210ENST00000468211 MTIF2P46199 727 aaKnown RBP25.27■■□□□ 1.64
PTCH1-210ENST00000468211 GRIA4P48058 902 aa25.27■■□□□ 1.64
PTCH1-210ENST00000468211 CDK17Q00537 523 aa25.27■■□□□ 1.64
PTCH1-210ENST00000468211 DPY19L2P1Q6NXN4 242 aa25.27■■□□□ 1.64
PTCH1-210ENST00000468211 NCEH1Q6PIU2 408 aa25.27■■□□□ 1.64
PTCH1-210ENST00000468211 STK40Q8N2I9 435 aa25.27■■□□□ 1.64
PTCH1-210ENST00000468211 AADATQ8N5Z0 425 aa25.27■■□□□ 1.64
PTCH1-210ENST00000468211 DNAJC12Q9UKB3 198 aa25.27■■□□□ 1.64
PTCH1-210ENST00000468211 SCML1Q9UN30 329 aa25.27■■□□□ 1.64
PTCH1-210ENST00000468211 CEP83Q9Y592 693 aa25.27■■□□□ 1.64
PTCH1-210ENST00000468211 FREM2Q5SZK8 3169 aa25.26■■□□□ 1.63
PTCH1-210ENST00000468211 EDDM13A0A1B0GTR0 161 aa25.26■■□□□ 1.63
PTCH1-210ENST00000468211 SRRM3A6NNA2 597 aaPredicted RBP25.26■■□□□ 1.63
PTCH1-210ENST00000468211 C10orf142B7Z368 130 aa25.26■■□□□ 1.63
PTCH1-210ENST00000468211 RNASEH1O60930 286 aaKnown RBP25.26■■□□□ 1.63
PTCH1-210ENST00000468211 GLI1P08151 1106 aa25.26■■□□□ 1.63
PTCH1-210ENST00000468211 PDGFRAP16234 1089 aa25.26■■□□□ 1.63
PTCH1-210ENST00000468211 SLC8A1P32418 973 aa25.26■■□□□ 1.63
PTCH1-210ENST00000468211 CLCN1P35523 988 aa25.26■■□□□ 1.63
PTCH1-210ENST00000468211 CENPCQ03188 943 aa25.26■■□□□ 1.63
PTCH1-210ENST00000468211 KCNJ12Q14500 433 aa25.26■■□□□ 1.63
PTCH1-210ENST00000468211 TEAD4Q15561 434 aa25.26■■□□□ 1.63
PTCH1-210ENST00000468211 CXorf57Q6NSI4 855 aaKnown RBP25.26■■□□□ 1.63
PTCH1-210ENST00000468211 FBXL22Q6P050 247 aa25.26■■□□□ 1.63
PTCH1-210ENST00000468211 OLFML1Q6UWY5 402 aa25.26■■□□□ 1.63
PTCH1-210ENST00000468211 SLC47A2Q86VL8 602 aa25.26■■□□□ 1.63
PTCH1-210ENST00000468211 OR52K2Q8NGK3 314 aa25.26■■□□□ 1.63
PTCH1-210ENST00000468211 IGSF8Q969P0 613 aa25.26■■□□□ 1.63
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms