RNA–Protein interactions for RNA: ENST00000467319.1

MSH5-212, Transcript of mutS homolog 5, humanhuman

TSL 2

Gene MSH5, Length 688 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-212ENST00000467319 L1CAMP32004 1257 aa11.38□□□□□ -0.59
MSH5-212ENST00000467319 CXCL12P48061 93 aa11.38□□□□□ -0.59
MSH5-212ENST00000467319 PLK1P53350 603 aa11.38□□□□□ -0.59
MSH5-212ENST00000467319 PTPN5P54829 565 aa11.38□□□□□ -0.59
MSH5-212ENST00000467319 SLC25A11Q02978 314 aaKnown RBP11.38□□□□□ -0.59
MSH5-212ENST00000467319 PIGHQ14442 188 aaPredicted RBP11.38□□□□□ -0.59
MSH5-212ENST00000467319 DMC1Q14565 340 aa11.38□□□□□ -0.59
MSH5-212ENST00000467319 PTPRNQ16849 979 aa11.38□□□□□ -0.59
MSH5-212ENST00000467319 PLEKHG6Q3KR16 790 aa11.38□□□□□ -0.59
MSH5-212ENST00000467319 PITRM1Q5JRX3 1037 aa11.38□□□□□ -0.59
MSH5-212ENST00000467319 EFHC2Q5JST6 749 aa11.38□□□□□ -0.59
MSH5-212ENST00000467319 DAB2IPQ5VWQ8 1189 aa11.38□□□□□ -0.59
MSH5-212ENST00000467319 RAD9BQ6WBX8 426 aa11.38□□□□□ -0.59
MSH5-212ENST00000467319 NUDT18Q6ZVK8 323 aa11.38□□□□□ -0.59
MSH5-212ENST00000467319 TRMT11Q7Z4G4 463 aaKnown RBP11.38□□□□□ -0.59
MSH5-212ENST00000467319 SLFN11Q7Z7L1 901 aa11.38□□□□□ -0.59
MSH5-212ENST00000467319 NLRP14Q86W24 1093 aa11.38□□□□□ -0.59
MSH5-212ENST00000467319 TMTC1Q8IUR5 882 aa11.38□□□□□ -0.59
MSH5-212ENST00000467319 PSTKQ8IV42 348 aaKnown RBP11.38□□□□□ -0.59
MSH5-212ENST00000467319 CARNMT1Q8N4J0 409 aa11.38□□□□□ -0.59
MSH5-212ENST00000467319 TXNDC5Q8NBS9 432 aaKnown RBP11.38□□□□□ -0.59
MSH5-212ENST00000467319 SPC24Q8NBT2 197 aa11.38□□□□□ -0.59
MSH5-212ENST00000467319 TTC17Q96AE7 1141 aa11.38□□□□□ -0.59
MSH5-212ENST00000467319 ALG14Q96F25 216 aa11.38□□□□□ -0.59
MSH5-212ENST00000467319 BTBD6Q96KE9 485 aa11.38□□□□□ -0.59
MSH5-212ENST00000467319 ACOX2Q99424 681 aa11.38□□□□□ -0.59
MSH5-212ENST00000467319 EIF3CQ99613 913 aaKnown RBP11.38□□□□□ -0.59
MSH5-212ENST00000467319 SNRNP25Q9BV90 132 aaKnown RBP11.38□□□□□ -0.59
MSH5-212ENST00000467319 ZYG11BQ9C0D3 744 aa11.38□□□□□ -0.59
MSH5-212ENST00000467319 ZDHHC4Q9NPG8 344 aa11.38□□□□□ -0.59
MSH5-212ENST00000467319 POLR3BQ9NW08 1133 aaPredicted RBP11.38□□□□□ -0.59
MSH5-212ENST00000467319 ELOVL2Q9NXB9 296 aa11.38□□□□□ -0.59
MSH5-212ENST00000467319 OR12D3Q9UGF7 316 aa11.38□□□□□ -0.59
MSH5-212ENST00000467319 IP6K2Q9UHH9 426 aa11.38□□□□□ -0.59
MSH5-212ENST00000467319 AP4E1Q9UPM8 1137 aa11.38□□□□□ -0.59
MSH5-212ENST00000467319 REXO2Q9Y3B8 237 aaKnown RBP11.38□□□□□ -0.59
MSH5-212ENST00000467319 A0A1W2PQF6 199 aa11.37□□□□□ -0.59
MSH5-212ENST00000467319 H0Y626 953 aa11.37□□□□□ -0.59
MSH5-212ENST00000467319 TIMM44O43615 452 aa11.37□□□□□ -0.59
MSH5-212ENST00000467319 RNF8O76064 485 aa11.37□□□□□ -0.59
MSH5-212ENST00000467319 PROSCO94903 275 aa11.37□□□□□ -0.59
MSH5-212ENST00000467319 NDUFA10O95299 355 aa11.37□□□□□ -0.59
MSH5-212ENST00000467319 DLDP09622 509 aaKnown RBP11.37□□□□□ -0.59
MSH5-212ENST00000467319 SP9P0CG40 484 aa11.37□□□□□ -0.59
MSH5-212ENST00000467319 C7P10643 843 aa11.37□□□□□ -0.59
MSH5-212ENST00000467319 RHOQP17081 205 aa11.37□□□□□ -0.59
MSH5-212ENST00000467319 COL9A1P20849 921 aa11.37□□□□□ -0.59
MSH5-212ENST00000467319 NTSR1P30989 418 aa11.37□□□□□ -0.59
MSH5-212ENST00000467319 MAN1A1P33908 653 aa11.37□□□□□ -0.59
MSH5-212ENST00000467319 HTR7P34969 479 aa11.37□□□□□ -0.59
MSH5-212ENST00000467319 TIE1P35590 1138 aa11.37□□□□□ -0.59
MSH5-212ENST00000467319 CYLC1P35663 651 aaPredicted RBP11.37□□□□□ -0.59
MSH5-212ENST00000467319 CSKP41240 450 aa11.37□□□□□ -0.59
MSH5-212ENST00000467319 HADHBP55084 474 aaKnown RBP11.37□□□□□ -0.59
MSH5-212ENST00000467319 OXCT1P55809 520 aa11.37□□□□□ -0.59
MSH5-212ENST00000467319 GSDMDP57764 484 aa11.37□□□□□ -0.59
MSH5-212ENST00000467319 SLC12A1Q13621 1099 aa11.37□□□□□ -0.59
MSH5-212ENST00000467319 CRY1Q16526 586 aa11.37□□□□□ -0.59
MSH5-212ENST00000467319 CA9Q16790 459 aa11.37□□□□□ -0.59
MSH5-212ENST00000467319 EOGTQ5NDL2 527 aa11.37□□□□□ -0.59
MSH5-212ENST00000467319 MBLAC2Q68D91 279 aa11.37□□□□□ -0.59
MSH5-212ENST00000467319 SCYL2Q6P3W7 929 aa11.37□□□□□ -0.59
MSH5-212ENST00000467319 LRRC31Q6UY01 552 aa11.37□□□□□ -0.59
MSH5-212ENST00000467319 TFAP2DQ7Z6R9 452 aa11.37□□□□□ -0.59
MSH5-212ENST00000467319 SETD3Q86TU7 594 aaPredicted RBP11.37□□□□□ -0.59
MSH5-212ENST00000467319 CPNE8Q86YQ8 564 aa11.37□□□□□ -0.59
MSH5-212ENST00000467319 RHOT2Q8IXI1 618 aa11.37□□□□□ -0.59
MSH5-212ENST00000467319 PYROXD2Q8N2H3 581 aa11.37□□□□□ -0.59
MSH5-212ENST00000467319 CCDC33Q8N5R6 958 aa11.37□□□□□ -0.59
MSH5-212ENST00000467319 SORCS1Q8WY21 1168 aa11.37□□□□□ -0.59
MSH5-212ENST00000467319 TBC1D31Q96DN5 1066 aa11.37□□□□□ -0.59
MSH5-212ENST00000467319 MYO19Q96H55 970 aa11.37□□□□□ -0.59
MSH5-212ENST00000467319 BAG1Q99933 345 aaPredicted RBP11.37□□□□□ -0.59
MSH5-212ENST00000467319 MAGEB5Q9BZ81 275 aa11.37□□□□□ -0.59
MSH5-212ENST00000467319 CIPCQ9C0C6 399 aa11.37□□□□□ -0.59
MSH5-212ENST00000467319 RETREG1Q9H6L5 497 aa11.37□□□□□ -0.59
MSH5-212ENST00000467319 OSGEPQ9NPF4 335 aa11.37□□□□□ -0.59
MSH5-212ENST00000467319 TMEM248Q9NWD8 314 aa11.37□□□□□ -0.59
MSH5-212ENST00000467319 GPATCH2LQ9NWQ4 482 aa11.37□□□□□ -0.59
MSH5-212ENST00000467319 CACNA2D2Q9NY47 1150 aa11.37□□□□□ -0.59
MSH5-212ENST00000467319 MPP6Q9NZW5 540 aa11.37□□□□□ -0.59
MSH5-212ENST00000467319 KIAA1522Q9P206 1035 aaPredicted RBP11.37□□□□□ -0.59
MSH5-212ENST00000467319 CTTNBP2NLQ9P2B4 639 aa11.37□□□□□ -0.59
MSH5-212ENST00000467319 THAP10Q9P2Z0 257 aaPredicted RBP11.37□□□□□ -0.59
MSH5-212ENST00000467319 RAPGEFL1Q9UHV5 662 aa11.37□□□□□ -0.59
MSH5-212ENST00000467319 LCMT1Q9UIC8 334 aa11.37□□□□□ -0.59
MSH5-212ENST00000467319 USP18Q9UMW8 372 aa11.37□□□□□ -0.59
MSH5-212ENST00000467319 EPN1Q9Y6I3 576 aaPredicted RBP11.37□□□□□ -0.59
MSH5-212ENST00000467319 ATG2BQ96BY7 2078 aa11.37□□□□□ -0.59
MSH5-212ENST00000467319 MYO18AQ92614 2054 aaKnown RBP11.36□□□□□ -0.59
MSH5-212ENST00000467319 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP11.36□□□□□ -0.59
MSH5-212ENST00000467319 MYO1FO00160 1098 aa11.36□□□□□ -0.59
MSH5-212ENST00000467319 PRPSAP2O60256 369 aa11.36□□□□□ -0.59
MSH5-212ENST00000467319 ASLP04424 464 aa11.36□□□□□ -0.59
MSH5-212ENST00000467319 HOXB2P14652 356 aa11.36□□□□□ -0.59
MSH5-212ENST00000467319 PRKCHP24723 683 aa11.36□□□□□ -0.59
MSH5-212ENST00000467319 MZF1P28698 734 aaPredicted RBP11.36□□□□□ -0.59
MSH5-212ENST00000467319 IL12RB1P42701 662 aa11.36□□□□□ -0.59
MSH5-212ENST00000467319 MAPKAPK2P49137 400 aa11.36□□□□□ -0.59
MSH5-212ENST00000467319 VASPP50552 380 aaPredicted RBP11.36□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 51.2 ms