RNA–Protein interactions for RNA: ENST00000467263.1

SMC4-207, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 2

Gene SMC4, Length 401 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-207ENST00000467263 C3orf49Q96BT1 292 aa4.7□□□□□ -1.66
SMC4-207ENST00000467263 PIMREGQ9BSJ6 248 aa4.7□□□□□ -1.66
SMC4-207ENST00000467263 HTATIP2Q9BUP3 242 aa4.7□□□□□ -1.66
SMC4-207ENST00000467263 MAGEH1Q9H213 219 aa4.7□□□□□ -1.66
SMC4-207ENST00000467263 PABPC3Q9H361 631 aaKnown RBP4.7□□□□□ -1.66
SMC4-207ENST00000467263 AAMDCQ9H7C9 122 aa4.7□□□□□ -1.66
SMC4-207ENST00000467263 GRHPRQ9UBQ7 328 aa4.7□□□□□ -1.66
SMC4-207ENST00000467263 UTS2RQ9UKP6 389 aa4.7□□□□□ -1.66
SMC4-207ENST00000467263 SLC8A2Q9UPR5 921 aa4.7□□□□□ -1.66
SMC4-207ENST00000467263 LZTS1Q9Y250 596 aa4.7□□□□□ -1.66
SMC4-207ENST00000467263 PCDHA10Q9Y5I2 948 aa4.7□□□□□ -1.66
SMC4-207ENST00000467263 TTBK1Q5TCY1 1321 aaPredicted RBP4.7□□□□□ -1.66
SMC4-207ENST00000467263 LMTK3Q96Q04 1460 aa4.69□□□□□ -1.66
SMC4-207ENST00000467263 CYP3A7-CYP3A51PA0A087WV96 503 aa4.69□□□□□ -1.66
SMC4-207ENST00000467263 TRBV5-3A0A0A0MS03 114 aa4.69□□□□□ -1.66
SMC4-207ENST00000467263 CD8B2A6NJW9 211 aa4.69□□□□□ -1.66
SMC4-207ENST00000467263 SGPL1O95470 568 aa4.69□□□□□ -1.66
SMC4-207ENST00000467263 CYP3A7P24462 503 aa4.69□□□□□ -1.66
SMC4-207ENST00000467263 CHKAP35790 457 aa4.69□□□□□ -1.66
SMC4-207ENST00000467263 TRAPPC10P48553 1259 aa4.69□□□□□ -1.66
SMC4-207ENST00000467263 HTR6P50406 440 aa4.69□□□□□ -1.66
SMC4-207ENST00000467263 TIGD6Q17RP2 521 aa4.69□□□□□ -1.66
SMC4-207ENST00000467263 GALNTL6Q49A17 601 aa4.69□□□□□ -1.66
SMC4-207ENST00000467263 TMEM88Q6PEY1 159 aa4.69□□□□□ -1.66
SMC4-207ENST00000467263 KIAA1324Q6UXG2 1013 aaKnown RBP4.69□□□□□ -1.66
SMC4-207ENST00000467263 RAB11FIP2Q7L804 512 aa4.69□□□□□ -1.66
SMC4-207ENST00000467263 RBMXL3Q8N7X1 1067 aaKnown RBP4.69□□□□□ -1.66
SMC4-207ENST00000467263 ENAHQ8N8S7 591 aaPredicted RBP4.69□□□□□ -1.66
SMC4-207ENST00000467263 FAM47BQ8NA70 645 aa4.69□□□□□ -1.66
SMC4-207ENST00000467263 OR52N4Q8NGI2 321 aa4.69□□□□□ -1.66
SMC4-207ENST00000467263 ZFYVE19Q96K21 471 aa4.69□□□□□ -1.66
SMC4-207ENST00000467263 ADAD1Q96M93 576 aaKnown RBP4.69□□□□□ -1.66
SMC4-207ENST00000467263 TUBB6Q9BUF5 446 aa4.69□□□□□ -1.66
SMC4-207ENST00000467263 TMEM120AQ9BXJ8 343 aa4.69□□□□□ -1.66
SMC4-207ENST00000467263 ERVK-5Q9HDB9 667 aa4.69□□□□□ -1.66
SMC4-207ENST00000467263 PAPOLBQ9NRJ5 636 aaKnown RBP4.69□□□□□ -1.66
SMC4-207ENST00000467263 MSRB1Q9NZV6 116 aa4.69□□□□□ -1.66
SMC4-207ENST00000467263 FBXO4Q9UKT5 387 aa4.69□□□□□ -1.66
SMC4-207ENST00000467263 COG5Q9UP83 839 aa4.69□□□□□ -1.66
SMC4-207ENST00000467263 HS3ST3B1Q9Y662 390 aa4.69□□□□□ -1.66
SMC4-207ENST00000467263 COPG1Q9Y678 874 aaKnown RBP4.69□□□□□ -1.66
SMC4-207ENST00000467263 DPPA5A6NC42 116 aa4.68□□□□□ -1.66
SMC4-207ENST00000467263 FAM90A10PA6NDY2 464 aa4.68□□□□□ -1.66
SMC4-207ENST00000467263 HMX3A6NHT5 357 aa4.68□□□□□ -1.66
SMC4-207ENST00000467263 MBD3L5A6NJ08 208 aaPredicted RBP4.68□□□□□ -1.66
SMC4-207ENST00000467263 CYSRT1A8MQ03 144 aa4.68□□□□□ -1.66
SMC4-207ENST00000467263 EFCAB8A8MWE9 144 aa4.68□□□□□ -1.66
SMC4-207ENST00000467263 HEXIM1O94992 359 aaKnown RBP4.68□□□□□ -1.66
SMC4-207ENST00000467263 NFATC1O95644 943 aa4.68□□□□□ -1.66
SMC4-207ENST00000467263 LDHAP00338 332 aaKnown RBP4.68□□□□□ -1.66
SMC4-207ENST00000467263 SCP2P22307 547 aa4.68□□□□□ -1.66
SMC4-207ENST00000467263 CIITAP33076 1130 aa4.68□□□□□ -1.66
SMC4-207ENST00000467263 ME1P48163 572 aa4.68□□□□□ -1.66
SMC4-207ENST00000467263 RCAN1P53805 252 aa4.68□□□□□ -1.66
SMC4-207ENST00000467263 POLE2P56282 527 aa4.68□□□□□ -1.66
SMC4-207ENST00000467263 B4GALNT1Q00973 533 aa4.68□□□□□ -1.66
SMC4-207ENST00000467263 ARL13AQ5H913 290 aaPredicted RBP4.68□□□□□ -1.66
SMC4-207ENST00000467263 KIAA1755Q5JYT7 1200 aa4.68□□□□□ -1.66
SMC4-207ENST00000467263 TTC22Q5TAA0 569 aa4.68□□□□□ -1.66
SMC4-207ENST00000467263 SYNE3Q6ZMZ3 975 aa4.68□□□□□ -1.66
SMC4-207ENST00000467263 PAQR4Q8N4S7 273 aaPredicted RBP4.68□□□□□ -1.66
SMC4-207ENST00000467263 EXD3Q8N9H8 876 aa4.68□□□□□ -1.66
SMC4-207ENST00000467263 IP6K1Q92551 441 aa4.68□□□□□ -1.66
SMC4-207ENST00000467263 KAT2AQ92830 837 aa4.68□□□□□ -1.66
SMC4-207ENST00000467263 ATP2A3Q93084 1043 aa4.68□□□□□ -1.66
SMC4-207ENST00000467263 EME1Q96AY2 570 aa4.68□□□□□ -1.66
SMC4-207ENST00000467263 LTV1Q96GA3 475 aaPredicted RBP4.68□□□□□ -1.66
SMC4-207ENST00000467263 TRAPPC9Q96Q05 1148 aa4.68□□□□□ -1.66
SMC4-207ENST00000467263 TRMOQ9BU70 441 aa4.68□□□□□ -1.66
SMC4-207ENST00000467263 C19orf53Q9UNZ5 99 aaPredicted RBP4.68□□□□□ -1.66
SMC4-207ENST00000467263 CXorf65A6NEN9 183 aa4.67□□□□□ -1.66
SMC4-207ENST00000467263 H3BNX3 289 aa4.67□□□□□ -1.66
SMC4-207ENST00000467263 GTPBP1O00178 669 aaKnown RBP4.67□□□□□ -1.66
SMC4-207ENST00000467263 IPO5O00410 1097 aaKnown RBP4.67□□□□□ -1.66
SMC4-207ENST00000467263 WNT1P04628 370 aa4.67□□□□□ -1.66
SMC4-207ENST00000467263 CYP21A2P08686 494 aa4.67□□□□□ -1.66
SMC4-207ENST00000467263 PSG1P11464 419 aa4.67□□□□□ -1.66
SMC4-207ENST00000467263 SERPINA4P29622 427 aa4.67□□□□□ -1.66
SMC4-207ENST00000467263 PDCLQ13371 301 aa4.67□□□□□ -1.66
SMC4-207ENST00000467263 JMJD6Q6NYC1 403 aaPredicted RBP4.67□□□□□ -1.66
SMC4-207ENST00000467263 LRIG3Q6UXM1 1119 aa4.67□□□□□ -1.66
SMC4-207ENST00000467263 C9orf47Q6ZRZ4 202 aa4.67□□□□□ -1.66
SMC4-207ENST00000467263 B4GALNT4Q76KP1 1039 aa4.67□□□□□ -1.66
SMC4-207ENST00000467263 MDGA2Q7Z553 956 aa4.67□□□□□ -1.66
SMC4-207ENST00000467263 ARFGAP1Q8N6T3 406 aa4.67□□□□□ -1.66
SMC4-207ENST00000467263 SLC44A5Q8NCS7 719 aa4.67□□□□□ -1.66
SMC4-207ENST00000467263 OTUD7AQ8TE49 926 aaPredicted RBP4.67□□□□□ -1.66
SMC4-207ENST00000467263 CPT1BQ92523 772 aa4.67□□□□□ -1.66
SMC4-207ENST00000467263 THSD1Q9NS62 852 aa4.67□□□□□ -1.66
SMC4-207ENST00000467263 POT1Q9NUX5 634 aa4.67□□□□□ -1.66
SMC4-207ENST00000467263 KCND3Q9UK17 655 aa4.67□□□□□ -1.66
SMC4-207ENST00000467263 AGO2Q9UKV8 859 aaKnown RBP4.67□□□□□ -1.66
SMC4-207ENST00000467263 RCE1Q9Y256 329 aa4.67□□□□□ -1.66
SMC4-207ENST00000467263 SQORQ9Y6N5 450 aa4.67□□□□□ -1.66
SMC4-207ENST00000467263 KIR2DS5A0A0G2JLQ3 304 aa4.66□□□□□ -1.66
SMC4-207ENST00000467263 ZNF814B7Z6K7 855 aa4.66□□□□□ -1.66
SMC4-207ENST00000467263 H0Y3Z8 333 aa4.66□□□□□ -1.66
SMC4-207ENST00000467263 KIR2DS3K7RE56 304 aa4.66□□□□□ -1.66
SMC4-207ENST00000467263 RHODO00212 210 aa4.66□□□□□ -1.66
SMC4-207ENST00000467263 VEGFAP15692 232 aaPredicted RBP4.66□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms