RNA–Protein interactions for RNA: ENST00000467246.5

HPS1-208, Transcript of HPS1, biogenesis of lysosomal organelles complex 3 subunit 1, humanhuman

TSL 1 (best)

Gene HPS1, Length 2,791 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS1-208ENST00000467246 MGRN1O60291 552 aa11.72□□□□□ -0.53
HPS1-208ENST00000467246 DDHD2O94830 711 aa11.72□□□□□ -0.53
HPS1-208ENST00000467246 UNC5CO95185 931 aa11.72□□□□□ -0.53
HPS1-208ENST00000467246 PGAM1P18669 254 aa11.72□□□□□ -0.53
HPS1-208ENST00000467246 GARSP41250 739 aaKnown RBP11.72□□□□□ -0.53
HPS1-208ENST00000467246 ACLYP53396 1101 aa11.72□□□□□ -0.53
HPS1-208ENST00000467246 NIPAL4Q0D2K0 466 aa11.72□□□□□ -0.53
HPS1-208ENST00000467246 MBTPS1Q14703 1052 aa11.72□□□□□ -0.53
HPS1-208ENST00000467246 FAM26DQ5JW98 314 aa11.72□□□□□ -0.53
HPS1-208ENST00000467246 ASRGL1Q7L266 308 aa11.72□□□□□ -0.53
HPS1-208ENST00000467246 NLRP9Q7RTR0 991 aa11.72□□□□□ -0.53
HPS1-208ENST00000467246 THEM5Q8N1Q8 247 aa11.72□□□□□ -0.53
HPS1-208ENST00000467246 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP11.72□□□□□ -0.53
HPS1-208ENST00000467246 FCRL3Q96P31 734 aaPredicted RBP11.72□□□□□ -0.53
HPS1-208ENST00000467246 MAGED2Q9UNF1 606 aaPredicted RBP11.72□□□□□ -0.53
HPS1-208ENST00000467246 TTC3P53804 2025 aa11.71□□□□□ -0.53
HPS1-208ENST00000467246 A0A0G2JND7 137 aa11.71□□□□□ -0.53
HPS1-208ENST00000467246 CHUKO15111 745 aa11.71□□□□□ -0.53
HPS1-208ENST00000467246 NCAM2O15394 837 aa11.71□□□□□ -0.53
HPS1-208ENST00000467246 MSI1O43347 362 aaKnown RBP11.71□□□□□ -0.53
HPS1-208ENST00000467246 TROVE2P10155 538 aaKnown RBP eCLIP11.71□□□□□ -0.53
HPS1-208ENST00000467246 ERVK-10P10266 1014 aa11.71□□□□□ -0.53
HPS1-208ENST00000467246 GRIK1P39086 918 aa11.71□□□□□ -0.53
HPS1-208ENST00000467246 SERPINB9P50453 376 aa11.71□□□□□ -0.53
HPS1-208ENST00000467246 SLC5A3P53794 718 aa11.71□□□□□ -0.53
HPS1-208ENST00000467246 TSPY1Q01534 308 aa11.71□□□□□ -0.53
HPS1-208ENST00000467246 YWHAHQ04917 246 aaPredicted RBP11.71□□□□□ -0.53
HPS1-208ENST00000467246 GALNT2Q10471 571 aa11.71□□□□□ -0.53
HPS1-208ENST00000467246 NAA25Q14CX7 972 aa11.71□□□□□ -0.53
HPS1-208ENST00000467246 CES4AQ5XG92 561 aa11.71□□□□□ -0.53
HPS1-208ENST00000467246 RWDD4Q6NW29 188 aaKnown RBP11.71□□□□□ -0.53
HPS1-208ENST00000467246 MARK2Q7KZI7 788 aaKnown RBP11.71□□□□□ -0.53
HPS1-208ENST00000467246 SPATA2LQ8IUW3 424 aaPredicted RBP11.71□□□□□ -0.53
HPS1-208ENST00000467246 HDAC11Q96DB2 347 aa11.71□□□□□ -0.53
HPS1-208ENST00000467246 APOL2Q9BQE5 337 aa11.71□□□□□ -0.53
HPS1-208ENST00000467246 MLPHQ9BV36 600 aaPredicted RBP11.71□□□□□ -0.53
HPS1-208ENST00000467246 SFMBT1Q9UHJ3 866 aa11.71□□□□□ -0.53
HPS1-208ENST00000467246 RAD54BQ9Y620 910 aa11.71□□□□□ -0.53
HPS1-208ENST00000467246 RPS6KL1Q9Y6S9 549 aa11.71□□□□□ -0.53
HPS1-208ENST00000467246 C2CD2LO14523 706 aa11.71□□□□□ -0.54
HPS1-208ENST00000467246 DCTN3O75935 186 aa11.71□□□□□ -0.54
HPS1-208ENST00000467246 AP2A1O95782 977 aa11.71□□□□□ -0.54
HPS1-208ENST00000467246 IGLV3-25P01717 112 aa11.71□□□□□ -0.54
HPS1-208ENST00000467246 KRT16P08779 473 aa11.71□□□□□ -0.54
HPS1-208ENST00000467246 CKBP12277 381 aa11.71□□□□□ -0.54
HPS1-208ENST00000467246 CCNB1P14635 433 aa11.71□□□□□ -0.54
HPS1-208ENST00000467246 NFKB1P19838 968 aa11.71□□□□□ -0.54
HPS1-208ENST00000467246 TARSP26639 723 aaKnown RBP11.71□□□□□ -0.54
HPS1-208ENST00000467246 PEX19P40855 299 aa11.71□□□□□ -0.54
HPS1-208ENST00000467246 EIF4EBP2Q13542 120 aaPredicted RBP11.71□□□□□ -0.54
HPS1-208ENST00000467246 PACS1Q6VY07 963 aa11.71□□□□□ -0.54
HPS1-208ENST00000467246 MTDHQ86UE4 582 aaKnown RBP11.71□□□□□ -0.54
HPS1-208ENST00000467246 UROC1Q96N76 676 aa11.71□□□□□ -0.54
HPS1-208ENST00000467246 TRIM55Q9BYV6 548 aa11.71□□□□□ -0.54
HPS1-208ENST00000467246 ZNF395Q9H8N7 513 aaPredicted RBP11.71□□□□□ -0.54
HPS1-208ENST00000467246 ARHGEF3Q9NR81 526 aa11.71□□□□□ -0.54
HPS1-208ENST00000467246 UBP1Q9NZI7 540 aa11.71□□□□□ -0.54
HPS1-208ENST00000467246 L3MBTL1Q9Y468 752 aa11.71□□□□□ -0.54
HPS1-208ENST00000467246 TNFRSF10BO14763 440 aa11.7□□□□□ -0.54
HPS1-208ENST00000467246 AOC2O75106 756 aa11.7□□□□□ -0.54
HPS1-208ENST00000467246 JCHAINP01591 159 aa11.7□□□□□ -0.54
HPS1-208ENST00000467246 ALDOAP04075 364 aaKnown RBP11.7□□□□□ -0.54
HPS1-208ENST00000467246 F7P08709 466 aaPredicted RBP11.7□□□□□ -0.54
HPS1-208ENST00000467246 MX2P20592 715 aa11.7□□□□□ -0.54
HPS1-208ENST00000467246 CRHR1P34998 444 aa11.7□□□□□ -0.54
HPS1-208ENST00000467246 CLNS1AP54105 237 aaKnown RBP11.7□□□□□ -0.54
HPS1-208ENST00000467246 IRX4P78413 519 aa11.7□□□□□ -0.54
HPS1-208ENST00000467246 TEX44Q53QW1 395 aa11.7□□□□□ -0.54
HPS1-208ENST00000467246 CLLU1OSQ5K130 101 aa11.7□□□□□ -0.54
HPS1-208ENST00000467246 SDHAF4Q5VUM1 108 aa11.7□□□□□ -0.54
HPS1-208ENST00000467246 KCTD11Q693B1 232 aa11.7□□□□□ -0.54
HPS1-208ENST00000467246 ARHGAP36Q6ZRI8 547 aa11.7□□□□□ -0.54
HPS1-208ENST00000467246 SCD5Q86SK9 330 aa11.7□□□□□ -0.54
HPS1-208ENST00000467246 RNF180Q86T96 592 aa11.7□□□□□ -0.54
HPS1-208ENST00000467246 CCNJLQ8IV13 435 aa11.7□□□□□ -0.54
HPS1-208ENST00000467246 ZSCAN18Q8TBC5 510 aaPredicted RBP11.7□□□□□ -0.54
HPS1-208ENST00000467246 CDKL2Q92772 493 aa11.7□□□□□ -0.54
HPS1-208ENST00000467246 APBB2Q92870 758 aa11.7□□□□□ -0.54
HPS1-208ENST00000467246 TMEM237Q96Q45 408 aa11.7□□□□□ -0.54
HPS1-208ENST00000467246 KCNK13Q9HB14 408 aa11.7□□□□□ -0.54
HPS1-208ENST00000467246 RGS18Q9NS28 235 aa11.7□□□□□ -0.54
HPS1-208ENST00000467246 HAO1Q9UJM8 370 aa11.7□□□□□ -0.54
HPS1-208ENST00000467246 NEU3Q9UQ49 428 aa11.7□□□□□ -0.54
HPS1-208ENST00000467246 CCDC195A0A1B0GUA6 201 aa11.7□□□□□ -0.54
HPS1-208ENST00000467246 C2orf71A6NGG8 1288 aa11.7□□□□□ -0.54
HPS1-208ENST00000467246 IRAK2O43187 625 aa11.7□□□□□ -0.54
HPS1-208ENST00000467246 POLBP06746 335 aa11.7□□□□□ -0.54
HPS1-208ENST00000467246 T-ENOLP0DO92 83 aa11.7□□□□□ -0.54
HPS1-208ENST00000467246 SKIP12755 728 aa11.7□□□□□ -0.54
HPS1-208ENST00000467246 SERPINB6P35237 376 aa11.7□□□□□ -0.54
HPS1-208ENST00000467246 SP3Q02447 781 aa11.7□□□□□ -0.54
HPS1-208ENST00000467246 MAPRE1Q15691 268 aaKnown RBP11.7□□□□□ -0.54
HPS1-208ENST00000467246 SLC39A12Q504Y0 691 aa11.7□□□□□ -0.54
HPS1-208ENST00000467246 TAF1BQ53T94 588 aaPredicted RBP11.7□□□□□ -0.54
HPS1-208ENST00000467246 CERCAMQ5T4B2 595 aa11.7□□□□□ -0.54
HPS1-208ENST00000467246 GLB1LQ6UWU2 654 aa11.7□□□□□ -0.54
HPS1-208ENST00000467246 TIFABQ6ZNK6 161 aa11.7□□□□□ -0.54
HPS1-208ENST00000467246 SCN4BQ8IWT1 228 aa11.7□□□□□ -0.54
HPS1-208ENST00000467246 SCML4Q8N228 414 aa11.7□□□□□ -0.54
HPS1-208ENST00000467246 DNAAF3Q8N9W5 541 aa11.7□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms