RNA–Protein interactions for RNA: ENST00000466897.1

NPHP4-205, Transcript of nephrocystin 4, humanhuman

TSL 1 (best)

Gene NPHP4, Length 1,192 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP4-205ENST00000466897 IRAK1P51617 712 aa15.63■□□□□ 0.09
NPHP4-205ENST00000466897 PRKCQQ04759 706 aa15.63■□□□□ 0.09
NPHP4-205ENST00000466897 SLC12A1Q13621 1099 aa15.63■□□□□ 0.09
NPHP4-205ENST00000466897 RPS6KA1Q15418 735 aa15.63■□□□□ 0.09
NPHP4-205ENST00000466897 ODF2Q5BJF6 829 aa15.63■□□□□ 0.09
NPHP4-205ENST00000466897 ZNF569Q5MCW4 686 aa15.63■□□□□ 0.09
NPHP4-205ENST00000466897 ZFYVE27Q5T4F4 411 aa15.63■□□□□ 0.09
NPHP4-205ENST00000466897 MFN1Q8IWA4 741 aa15.63■□□□□ 0.09
NPHP4-205ENST00000466897 CCDC117Q8IWD4 279 aaPredicted RBP15.63■□□□□ 0.09
NPHP4-205ENST00000466897 ALG3Q92685 438 aa15.63■□□□□ 0.09
NPHP4-205ENST00000466897 TLR10Q9BXR5 811 aa15.63■□□□□ 0.09
NPHP4-205ENST00000466897 CALN1Q9BXU9 219 aa15.63■□□□□ 0.09
NPHP4-205ENST00000466897 ARHGEF4Q9NR80 690 aa15.63■□□□□ 0.09
NPHP4-205ENST00000466897 KLHL11Q9NVR0 708 aa15.63■□□□□ 0.09
NPHP4-205ENST00000466897 PIAS3Q9Y6X2 628 aa15.63■□□□□ 0.09
NPHP4-205ENST00000466897 NYNRINQ9P2P1 1898 aaKnown RBP15.63■□□□□ 0.09
NPHP4-205ENST00000466897 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP15.62■□□□□ 0.09
NPHP4-205ENST00000466897 DCLK1O15075 740 aa15.62■□□□□ 0.09
NPHP4-205ENST00000466897 TULP3O75386 442 aa15.62■□□□□ 0.09
NPHP4-205ENST00000466897 CNTN5O94779 1100 aa15.62■□□□□ 0.09
NPHP4-205ENST00000466897 CD48P09326 243 aa15.62■□□□□ 0.09
NPHP4-205ENST00000466897 TNNT1P13805 278 aa15.62■□□□□ 0.09
NPHP4-205ENST00000466897 CDKN2BP42772 138 aa15.62■□□□□ 0.09
NPHP4-205ENST00000466897 ZNF177Q13360 481 aaPredicted RBP15.62■□□□□ 0.09
NPHP4-205ENST00000466897 CDH18Q13634 790 aa15.62■□□□□ 0.09
NPHP4-205ENST00000466897 MLF2Q15773 248 aaPredicted RBP15.62■□□□□ 0.09
NPHP4-205ENST00000466897 SLC44A4Q53GD3 710 aa15.62■□□□□ 0.09
NPHP4-205ENST00000466897 ANKRD20A8PQ5CZ79 823 aa15.62■□□□□ 0.09
NPHP4-205ENST00000466897 TFDP3Q5H9I0 405 aa15.62■□□□□ 0.09
NPHP4-205ENST00000466897 C6orf118Q5T5N4 469 aa15.62■□□□□ 0.09
NPHP4-205ENST00000466897 CXorf57Q6NSI4 855 aaKnown RBP15.62■□□□□ 0.09
NPHP4-205ENST00000466897 RWDD4Q6NW29 188 aaKnown RBP15.62■□□□□ 0.09
NPHP4-205ENST00000466897 KIAA0907Q7Z7F0 614 aaPredicted RBP15.62■□□□□ 0.09
NPHP4-205ENST00000466897 C12orf40Q86WS4 652 aa15.62■□□□□ 0.09
NPHP4-205ENST00000466897 UMODL1-AS1Q8N2C9 162 aa15.62■□□□□ 0.09
NPHP4-205ENST00000466897 SLC35F6Q8N357 371 aa15.62■□□□□ 0.09
NPHP4-205ENST00000466897 PHTF2Q8N3S3 785 aa15.62■□□□□ 0.09
NPHP4-205ENST00000466897 LZTR1Q8N653 840 aa15.62■□□□□ 0.09
NPHP4-205ENST00000466897 LMLNQ96KR4 655 aa15.62■□□□□ 0.09
NPHP4-205ENST00000466897 NECAB3Q96P71 396 aaPredicted RBP15.62■□□□□ 0.09
NPHP4-205ENST00000466897 RNF157Q96PX1 679 aa15.62■□□□□ 0.09
NPHP4-205ENST00000466897 CARD9Q9H257 536 aa15.62■□□□□ 0.09
NPHP4-205ENST00000466897 HEBP1Q9NRV9 189 aa15.62■□□□□ 0.09
NPHP4-205ENST00000466897 PLK2Q9NYY3 685 aa15.62■□□□□ 0.09
NPHP4-205ENST00000466897 MPP6Q9NZW5 540 aa15.62■□□□□ 0.09
NPHP4-205ENST00000466897 KIAA1522Q9P206 1035 aaPredicted RBP15.62■□□□□ 0.09
NPHP4-205ENST00000466897 MUTYHQ9UIF7 546 aa15.62■□□□□ 0.09
NPHP4-205ENST00000466897 PACSIN2Q9UNF0 486 aaPredicted RBP15.62■□□□□ 0.09
NPHP4-205ENST00000466897 MUC22E2RYF6 1773 aaPredicted RBP15.62■□□□□ 0.09
NPHP4-205ENST00000466897 A0A0A0MRY4 1105 aa15.61■□□□□ 0.09
NPHP4-205ENST00000466897 ILVBLA1L0T0 632 aa15.61■□□□□ 0.09
NPHP4-205ENST00000466897 H0Y626 953 aa15.61■□□□□ 0.09
NPHP4-205ENST00000466897 MAN2B1O00754 1011 aa15.61■□□□□ 0.09
NPHP4-205ENST00000466897 DAPK3O43293 454 aa15.61■□□□□ 0.09
NPHP4-205ENST00000466897 CISD3P0C7P0 127 aa15.61■□□□□ 0.09
NPHP4-205ENST00000466897 ERCC2P18074 760 aa15.61■□□□□ 0.09
NPHP4-205ENST00000466897 OR1E1P30953 314 aa15.61■□□□□ 0.09
NPHP4-205ENST00000466897 ETFBP38117 255 aa15.61■□□□□ 0.09
NPHP4-205ENST00000466897 CETN2P41208 172 aa15.61■□□□□ 0.09
NPHP4-205ENST00000466897 DGKGP49619 791 aa15.61■□□□□ 0.09
NPHP4-205ENST00000466897 PLK1P53350 603 aa15.61■□□□□ 0.09
NPHP4-205ENST00000466897 DMC1Q14565 340 aa15.61■□□□□ 0.09
NPHP4-205ENST00000466897 MFSD7Q6UXD7 560 aa15.61■□□□□ 0.09
NPHP4-205ENST00000466897 SPOCD1Q6ZMY3 1216 aa15.61■□□□□ 0.09
NPHP4-205ENST00000466897 NYAP1Q6ZVC0 841 aa15.61■□□□□ 0.09
NPHP4-205ENST00000466897 ZSCAN30Q86W11 494 aa15.61■□□□□ 0.09
NPHP4-205ENST00000466897 CIR1Q86X95 450 aaPredicted RBP15.61■□□□□ 0.09
NPHP4-205ENST00000466897 CARNMT1Q8N4J0 409 aa15.61■□□□□ 0.09
NPHP4-205ENST00000466897 PCDH19Q8TAB3 1148 aa15.61■□□□□ 0.09
NPHP4-205ENST00000466897 WFIKKN2Q8TEU8 576 aa15.61■□□□□ 0.09
NPHP4-205ENST00000466897 BHMTQ93088 406 aa15.61■□□□□ 0.09
NPHP4-205ENST00000466897 ARHGEF3Q9NR81 526 aa15.61■□□□□ 0.09
NPHP4-205ENST00000466897 DNAJC17Q9NVM6 304 aaKnown RBP15.61■□□□□ 0.09
NPHP4-205ENST00000466897 DEC1Q9P2X7 70 aa15.61■□□□□ 0.09
NPHP4-205ENST00000466897 NCOR1O75376 2440 aa15.6■□□□□ 0.09
NPHP4-205ENST00000466897 VCANP13611 3396 aa15.6■□□□□ 0.09
NPHP4-205ENST00000466897 CXorf51AA0A1B0GTR3 108 aa15.6■□□□□ 0.09
NPHP4-205ENST00000466897 SHISA7A6NL88 538 aa15.6■□□□□ 0.09
NPHP4-205ENST00000466897 PI4K2BG5E9Z4 385 aa15.6■□□□□ 0.09
NPHP4-205ENST00000466897 TUBB4AP04350 444 aa15.6■□□□□ 0.09
NPHP4-205ENST00000466897 ZFXP17010 805 aaPredicted RBP15.6■□□□□ 0.09
NPHP4-205ENST00000466897 HLA-FP30511 346 aa15.6■□□□□ 0.09
NPHP4-205ENST00000466897 SERPINB6P35237 376 aa15.6■□□□□ 0.09
NPHP4-205ENST00000466897 NDST2P52849 883 aa15.6■□□□□ 0.09
NPHP4-205ENST00000466897 YBEYP58557 167 aaPredicted RBP15.6■□□□□ 0.09
NPHP4-205ENST00000466897 STARD6P59095 220 aa15.6■□□□□ 0.09
NPHP4-205ENST00000466897 GNG11P61952 73 aa15.6■□□□□ 0.09
NPHP4-205ENST00000466897 ETF1P62495 437 aaKnown RBP15.6■□□□□ 0.09
NPHP4-205ENST00000466897 ZXDAP98168 799 aa15.6■□□□□ 0.09
NPHP4-205ENST00000466897 MMRN1Q13201 1228 aa15.6■□□□□ 0.09
NPHP4-205ENST00000466897 TFDP2Q14188 446 aa15.6■□□□□ 0.09
NPHP4-205ENST00000466897 PAFAH1B3Q15102 231 aaKnown RBP15.6■□□□□ 0.09
NPHP4-205ENST00000466897 DCAF12L1Q5VU92 463 aa15.6■□□□□ 0.09
NPHP4-205ENST00000466897 AFMIDQ63HM1 303 aa15.6■□□□□ 0.09
NPHP4-205ENST00000466897 SLC9A4Q6AI14 798 aa15.6■□□□□ 0.09
NPHP4-205ENST00000466897 GRAMD4Q6IC98 578 aa15.6■□□□□ 0.09
NPHP4-205ENST00000466897 TMCO3Q6UWJ1 677 aa15.6■□□□□ 0.09
NPHP4-205ENST00000466897 NUDT18Q6ZVK8 323 aa15.6■□□□□ 0.09
NPHP4-205ENST00000466897 TFAP2DQ7Z6R9 452 aa15.6■□□□□ 0.09
NPHP4-205ENST00000466897 AHI1Q8N157 1196 aa15.6■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms