RNA–Protein interactions for RNA: ENST00000466624.1

GPC1-207, Transcript of glypican 1, humanhuman

TSL 2

Gene GPC1, Length 782 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPC1-207ENST00000466624 CARNMT1Q8N4J0 409 aa16.47■□□□□ 0.23
GPC1-207ENST00000466624 NAT16Q8N8M0 369 aa16.47■□□□□ 0.23
GPC1-207ENST00000466624 TRIM58Q8NG06 486 aa16.47■□□□□ 0.23
GPC1-207ENST00000466624 TSC1Q92574 1164 aa16.47■□□□□ 0.23
GPC1-207ENST00000466624 NELL2Q99435 816 aa16.47■□□□□ 0.23
GPC1-207ENST00000466624 ZNF670Q9BS34 389 aa16.47■□□□□ 0.23
GPC1-207ENST00000466624 MPP6Q9NZW5 540 aa16.47■□□□□ 0.23
GPC1-207ENST00000466624 STIM2Q9P246 746 aa16.47■□□□□ 0.23
GPC1-207ENST00000466624 AMFRQ9UKV5 643 aa16.47■□□□□ 0.23
GPC1-207ENST00000466624 CLEC4EQ9ULY5 219 aa16.47■□□□□ 0.23
GPC1-207ENST00000466624 HYOU1Q9Y4L1 999 aa16.47■□□□□ 0.23
GPC1-207ENST00000466624 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP16.46■□□□□ 0.23
GPC1-207ENST00000466624 KANSL1LA0AUZ9 987 aa16.46■□□□□ 0.23
GPC1-207ENST00000466624 H0Y626 953 aa16.46■□□□□ 0.23
GPC1-207ENST00000466624 TNFRSF10AO00220 468 aa16.46■□□□□ 0.23
GPC1-207ENST00000466624 CNTN5O94779 1100 aa16.46■□□□□ 0.23
GPC1-207ENST00000466624 GOT1P17174 413 aa16.46■□□□□ 0.23
GPC1-207ENST00000466624 DRD1P21728 446 aa16.46■□□□□ 0.23
GPC1-207ENST00000466624 GJC1P36383 396 aa16.46■□□□□ 0.23
GPC1-207ENST00000466624 GRIA2P42262 883 aa16.46■□□□□ 0.23
GPC1-207ENST00000466624 SLC6A11P48066 632 aa16.46■□□□□ 0.23
GPC1-207ENST00000466624 ZNF177Q13360 481 aaPredicted RBP16.46■□□□□ 0.23
GPC1-207ENST00000466624 KRT81Q14533 505 aa16.46■□□□□ 0.23
GPC1-207ENST00000466624 ATP13A4Q4VNC1 1196 aa16.46■□□□□ 0.23
GPC1-207ENST00000466624 C6orf118Q5T5N4 469 aa16.46■□□□□ 0.23
GPC1-207ENST00000466624 RWDD4Q6NW29 188 aaKnown RBP16.46■□□□□ 0.23
GPC1-207ENST00000466624 ZNF783Q6ZMS7 281 aa16.46■□□□□ 0.23
GPC1-207ENST00000466624 RFX8Q6ZV50 586 aa16.46■□□□□ 0.23
GPC1-207ENST00000466624 NUDT18Q6ZVK8 323 aa16.46■□□□□ 0.23
GPC1-207ENST00000466624 PEX26Q7Z412 305 aa16.46■□□□□ 0.23
GPC1-207ENST00000466624 CIR1Q86X95 450 aaPredicted RBP16.46■□□□□ 0.23
GPC1-207ENST00000466624 KATNAL2Q8IYT4 538 aa16.46■□□□□ 0.23
GPC1-207ENST00000466624 RTL3Q8N8U3 475 aaKnown RBP16.46■□□□□ 0.23
GPC1-207ENST00000466624 TERB1Q8NA31 727 aa16.46■□□□□ 0.23
GPC1-207ENST00000466624 KCTD6Q8NC69 237 aa16.46■□□□□ 0.23
GPC1-207ENST00000466624 WFIKKN2Q8TEU8 576 aa16.46■□□□□ 0.23
GPC1-207ENST00000466624 LMLNQ96KR4 655 aa16.46■□□□□ 0.23
GPC1-207ENST00000466624 COL25A1Q9BXS0 654 aaPredicted RBP16.46■□□□□ 0.23
GPC1-207ENST00000466624 OSBPL6Q9BZF3 934 aa16.46■□□□□ 0.23
GPC1-207ENST00000466624 ARHGEF4Q9NR80 690 aa16.46■□□□□ 0.23
GPC1-207ENST00000466624 CWC15Q9P013 229 aaKnown RBP16.46■□□□□ 0.23
GPC1-207ENST00000466624 KIAA1522Q9P206 1035 aaPredicted RBP16.46■□□□□ 0.23
GPC1-207ENST00000466624 PCDHA3Q9Y5H8 950 aa16.46■□□□□ 0.23
GPC1-207ENST00000466624 KAT7O95251 611 aa16.45■□□□□ 0.22
GPC1-207ENST00000466624 APODP05090 189 aa16.45■□□□□ 0.22
GPC1-207ENST00000466624 KDELR1P24390 212 aa16.45■□□□□ 0.22
GPC1-207ENST00000466624 HLA-FP30511 346 aa16.45■□□□□ 0.22
GPC1-207ENST00000466624 GRSF1Q12849 480 aaKnown RBP eCLIP16.45■□□□□ 0.22
GPC1-207ENST00000466624 DPYSQ14117 519 aa16.45■□□□□ 0.22
GPC1-207ENST00000466624 DPYSL3Q14195 570 aa16.45■□□□□ 0.22
GPC1-207ENST00000466624 DMC1Q14565 340 aa16.45■□□□□ 0.22
GPC1-207ENST00000466624 EIF4HQ15056 248 aaKnown RBP16.45■□□□□ 0.22
GPC1-207ENST00000466624 PON2Q15165 354 aa16.45■□□□□ 0.22
GPC1-207ENST00000466624 ASTLQ6HA08 431 aaPredicted RBP16.45■□□□□ 0.22
GPC1-207ENST00000466624 CXorf57Q6NSI4 855 aaKnown RBP16.45■□□□□ 0.22
GPC1-207ENST00000466624 ANKS1BQ7Z6G8 1248 aa16.45■□□□□ 0.22
GPC1-207ENST00000466624 AHI1Q8N157 1196 aa16.45■□□□□ 0.22
GPC1-207ENST00000466624 ZNF687Q8N1G0 1237 aa16.45■□□□□ 0.22
GPC1-207ENST00000466624 WFDC5Q8TCV5 224 aa16.45■□□□□ 0.22
GPC1-207ENST00000466624 FAF2Q96CS3 445 aa16.45■□□□□ 0.22
GPC1-207ENST00000466624 CSPG4P5Q96PW8 444 aa16.45■□□□□ 0.22
GPC1-207ENST00000466624 PRDM16Q9HAZ2 1276 aa16.45■□□□□ 0.22
GPC1-207ENST00000466624 LTB4R2Q9NPC1 389 aa16.45■□□□□ 0.22
GPC1-207ENST00000466624 GGA2Q9UJY4 613 aa16.45■□□□□ 0.22
GPC1-207ENST00000466624 ILVBLA1L0T0 632 aa16.44■□□□□ 0.22
GPC1-207ENST00000466624 C3orf70A6NLC5 250 aaPredicted RBP16.44■□□□□ 0.22
GPC1-207ENST00000466624 DAPK3O43293 454 aa16.44■□□□□ 0.22
GPC1-207ENST00000466624 KRT1P04264 644 aa16.44■□□□□ 0.22
GPC1-207ENST00000466624 PABPC1P11940 636 aaKnown RBP16.44■□□□□ 0.22
GPC1-207ENST00000466624 IL4RP24394 825 aa16.44■□□□□ 0.22
GPC1-207ENST00000466624 OR1E1P30953 314 aa16.44■□□□□ 0.22
GPC1-207ENST00000466624 TNFRSF4P43489 277 aa16.44■□□□□ 0.22
GPC1-207ENST00000466624 PLK1P53350 603 aa16.44■□□□□ 0.22
GPC1-207ENST00000466624 KDSRQ06136 332 aa16.44■□□□□ 0.22
GPC1-207ENST00000466624 LMAN2Q12907 356 aa16.44■□□□□ 0.22
GPC1-207ENST00000466624 CCINQ13939 588 aa16.44■□□□□ 0.22
GPC1-207ENST00000466624 FBXO43Q4G163 708 aa16.44■□□□□ 0.22
GPC1-207ENST00000466624 FSCBQ5H9T9 825 aa16.44■□□□□ 0.22
GPC1-207ENST00000466624 DGKKQ5KSL6 1271 aa16.44■□□□□ 0.22
GPC1-207ENST00000466624 ZFYVE27Q5T4F4 411 aa16.44■□□□□ 0.22
GPC1-207ENST00000466624 NAIF1Q69YI7 327 aaPredicted RBP16.44■□□□□ 0.22
GPC1-207ENST00000466624 FSTL4Q6MZW2 842 aa16.44■□□□□ 0.22
GPC1-207ENST00000466624 SYNPOQ8N3V7 929 aa16.44■□□□□ 0.22
GPC1-207ENST00000466624 EXD1Q8NHP7 514 aa16.44■□□□□ 0.22
GPC1-207ENST00000466624 CCDC26Q8TAB7 109 aa16.44■□□□□ 0.22
GPC1-207ENST00000466624 RAPGEF5Q92565 580 aa16.44■□□□□ 0.22
GPC1-207ENST00000466624 HES6Q96HZ4 224 aa16.44■□□□□ 0.22
GPC1-207ENST00000466624 RBM41Q96IZ5 413 aaKnown RBP16.44■□□□□ 0.22
GPC1-207ENST00000466624 TBC1D17Q9HA65 648 aa16.44■□□□□ 0.22
GPC1-207ENST00000466624 FBRSL1Q9HCM7 1045 aaKnown RBP16.44■□□□□ 0.22
GPC1-207ENST00000466624 ABCB8Q9NUT2 735 aa16.44■□□□□ 0.22
GPC1-207ENST00000466624 NUP205Q92621 2012 aa16.43■□□□□ 0.22
GPC1-207ENST00000466624 TRIOO75962 3097 aa16.43■□□□□ 0.22
GPC1-207ENST00000466624 LRRD1A4D1F6 860 aa16.43■□□□□ 0.22
GPC1-207ENST00000466624 TMEM221A6NGB7 291 aa16.43■□□□□ 0.22
GPC1-207ENST00000466624 M0R296 226 aa16.43■□□□□ 0.22
GPC1-207ENST00000466624 DCLK1O15075 740 aa16.43■□□□□ 0.22
GPC1-207ENST00000466624 TRIM24O15164 1050 aa16.43■□□□□ 0.22
GPC1-207ENST00000466624 FTCDO95954 541 aa16.43■□□□□ 0.22
GPC1-207ENST00000466624 RHOCP08134 193 aa16.43■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms