RNA–Protein interactions for RNA: ENST00000466538.1

CDC42BPA-211, Transcript of CDC42 binding protein kinase alpha, humanhuman

TSL 3

Gene CDC42BPA, Length 568 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-211ENST00000466538 WNT6Q9Y6F9 365 aa4.81□□□□□ -1.64
CDC42BPA-211ENST00000466538 GAGE10A6NGK3 116 aa4.8□□□□□ -1.64
CDC42BPA-211ENST00000466538 NPIPB13A6NJU9 1138 aa4.8□□□□□ -1.64
CDC42BPA-211ENST00000466538 C16orf96A6NNT2 1141 aa4.8□□□□□ -1.64
CDC42BPA-211ENST00000466538 NPIPB5A8MRT5 1133 aa4.8□□□□□ -1.64
CDC42BPA-211ENST00000466538 NPIPB4C9JG80 1138 aa4.8□□□□□ -1.64
CDC42BPA-211ENST00000466538 MCIDASD6RGH6 385 aa4.8□□□□□ -1.64
CDC42BPA-211ENST00000466538 RAMP2O60895 175 aa4.8□□□□□ -1.64
CDC42BPA-211ENST00000466538 BAIAP3O94812 1187 aa4.8□□□□□ -1.64
CDC42BPA-211ENST00000466538 DDX58O95786 925 aaKnown RBP4.8□□□□□ -1.64
CDC42BPA-211ENST00000466538 HLA-DQA2P01906 255 aa4.8□□□□□ -1.64
CDC42BPA-211ENST00000466538 RFPL3SP0C7P2 107 aa4.8□□□□□ -1.64
CDC42BPA-211ENST00000466538 CYP4B1P13584 511 aa4.8□□□□□ -1.64
CDC42BPA-211ENST00000466538 C6P13671 934 aa4.8□□□□□ -1.64
CDC42BPA-211ENST00000466538 PKMP14618 531 aaKnown RBP4.8□□□□□ -1.64
CDC42BPA-211ENST00000466538 PRKCHP24723 683 aa4.8□□□□□ -1.64
CDC42BPA-211ENST00000466538 ARHGAP8P85298 464 aa4.8□□□□□ -1.64
CDC42BPA-211ENST00000466538 SHC2P98077 582 aa4.8□□□□□ -1.64
CDC42BPA-211ENST00000466538 SLC14A1Q13336 389 aa4.8□□□□□ -1.64
CDC42BPA-211ENST00000466538 NFIL3Q16649 462 aa4.8□□□□□ -1.64
CDC42BPA-211ENST00000466538 SUMO4Q6EEV6 95 aa4.8□□□□□ -1.64
CDC42BPA-211ENST00000466538 MTFR2Q6P444 385 aa4.8□□□□□ -1.64
CDC42BPA-211ENST00000466538 OLFML1Q6UWY5 402 aa4.8□□□□□ -1.64
CDC42BPA-211ENST00000466538 C1orf122Q6ZSJ8 110 aa4.8□□□□□ -1.64
CDC42BPA-211ENST00000466538 GALNT7Q86SF2 657 aa4.8□□□□□ -1.64
CDC42BPA-211ENST00000466538 TMEM200AQ86VY9 491 aa4.8□□□□□ -1.64
CDC42BPA-211ENST00000466538 SCN4BQ8IWT1 228 aa4.8□□□□□ -1.64
CDC42BPA-211ENST00000466538 ZNF366Q8N895 744 aa4.8□□□□□ -1.64
CDC42BPA-211ENST00000466538 EXD3Q8N9H8 876 aa4.8□□□□□ -1.64
CDC42BPA-211ENST00000466538 LSM14AQ8ND56 463 aaKnown RBP4.8□□□□□ -1.64
CDC42BPA-211ENST00000466538 KCNJ9Q92806 393 aa4.8□□□□□ -1.64
CDC42BPA-211ENST00000466538 RNFT2Q96EX2 444 aa4.8□□□□□ -1.64
CDC42BPA-211ENST00000466538 C7orf26Q96N11 449 aa4.8□□□□□ -1.64
CDC42BPA-211ENST00000466538 ABHD14AQ9BUJ0 271 aa4.8□□□□□ -1.64
CDC42BPA-211ENST00000466538 GATA5Q9BWX5 397 aaPredicted RBP4.8□□□□□ -1.64
CDC42BPA-211ENST00000466538 ACAD9Q9H845 621 aa4.8□□□□□ -1.64
CDC42BPA-211ENST00000466538 SMC4Q9NTJ3 1288 aa4.8□□□□□ -1.64
CDC42BPA-211ENST00000466538 ARL8BQ9NVJ2 186 aa4.8□□□□□ -1.64
CDC42BPA-211ENST00000466538 MAP3K20Q9NYL2 800 aaKnown RBP4.8□□□□□ -1.64
CDC42BPA-211ENST00000466538 SH3BP4Q9P0V3 963 aa4.8□□□□□ -1.64
CDC42BPA-211ENST00000466538 HSF4Q9ULV5 492 aa4.8□□□□□ -1.64
CDC42BPA-211ENST00000466538 DTX4Q9Y2E6 619 aa4.8□□□□□ -1.64
CDC42BPA-211ENST00000466538 INSL6Q9Y581 213 aa4.8□□□□□ -1.64
CDC42BPA-211ENST00000466538 HS3ST3A1Q9Y663 406 aa4.8□□□□□ -1.64
CDC42BPA-211ENST00000466538 EMSYQ7Z589 1322 aa4.79□□□□□ -1.64
CDC42BPA-211ENST00000466538 A0A087X0M5 115 aa4.79□□□□□ -1.64
CDC42BPA-211ENST00000466538 A0A1B0GX30 115 aa4.79□□□□□ -1.64
CDC42BPA-211ENST00000466538 TMEM247A6NEH6 219 aa4.79□□□□□ -1.64
CDC42BPA-211ENST00000466538 FAM90A7PA6NKC0 464 aa4.79□□□□□ -1.64
CDC42BPA-211ENST00000466538 FAM90A22PA8MWA6 464 aa4.79□□□□□ -1.64
CDC42BPA-211ENST00000466538 FAM90A12PA8MX19 464 aa4.79□□□□□ -1.64
CDC42BPA-211ENST00000466538 FAM90A23PA8MXZ1 464 aa4.79□□□□□ -1.64
CDC42BPA-211ENST00000466538 TMEM232C9JQI7 657 aa4.79□□□□□ -1.64
CDC42BPA-211ENST00000466538 TSPAN4O14817 238 aa4.79□□□□□ -1.64
CDC42BPA-211ENST00000466538 MGST3O14880 152 aa4.79□□□□□ -1.64
CDC42BPA-211ENST00000466538 PROP1O75360 226 aa4.79□□□□□ -1.64
CDC42BPA-211ENST00000466538 PROZP22891 400 aa4.79□□□□□ -1.64
CDC42BPA-211ENST00000466538 GSTM2P28161 218 aa4.79□□□□□ -1.64
CDC42BPA-211ENST00000466538 AVPR2P30518 371 aa4.79□□□□□ -1.64
CDC42BPA-211ENST00000466538 PAFAH1B1P43034 410 aa4.79□□□□□ -1.64
CDC42BPA-211ENST00000466538 KRTAP10-2P60368 255 aa4.79□□□□□ -1.64
CDC42BPA-211ENST00000466538 RPP30P78346 268 aaKnown RBP4.79□□□□□ -1.64
CDC42BPA-211ENST00000466538 DPTQ07507 201 aa4.79□□□□□ -1.64
CDC42BPA-211ENST00000466538 SEMA3AQ14563 771 aa4.79□□□□□ -1.64
CDC42BPA-211ENST00000466538 CERKLQ49MI3 558 aaPredicted RBP4.79□□□□□ -1.64
CDC42BPA-211ENST00000466538 CC2D1BQ5T0F9 858 aaKnown RBP4.79□□□□□ -1.64
CDC42BPA-211ENST00000466538 AADACL2Q6P093 401 aa4.79□□□□□ -1.64
CDC42BPA-211ENST00000466538 C4orf50Q6ZRC1 276 aa4.79□□□□□ -1.64
CDC42BPA-211ENST00000466538 RFX6Q8HWS3 928 aa4.79□□□□□ -1.64
CDC42BPA-211ENST00000466538 Q8N1X5 172 aa4.79□□□□□ -1.64
CDC42BPA-211ENST00000466538 TNIP2Q8NFZ5 429 aa4.79□□□□□ -1.64
CDC42BPA-211ENST00000466538 ZNF398Q8TD17 642 aa4.79□□□□□ -1.64
CDC42BPA-211ENST00000466538 ZUFSPQ96AP4 578 aa4.79□□□□□ -1.64
CDC42BPA-211ENST00000466538 PHF7Q9BWX1 381 aaPredicted RBP4.79□□□□□ -1.64
CDC42BPA-211ENST00000466538 NPLQ9BXD5 320 aaPredicted RBP4.79□□□□□ -1.64
CDC42BPA-211ENST00000466538 IL21RQ9HBE5 538 aa4.79□□□□□ -1.64
CDC42BPA-211ENST00000466538 TXNRD2Q9NNW7 524 aa4.79□□□□□ -1.64
CDC42BPA-211ENST00000466538 IL17RBQ9NRM6 502 aa4.79□□□□□ -1.64
CDC42BPA-211ENST00000466538 OLA1Q9NTK5 396 aaKnown RBP4.79□□□□□ -1.64
CDC42BPA-211ENST00000466538 SEMA4GQ9NTN9 838 aa4.79□□□□□ -1.64
CDC42BPA-211ENST00000466538 BEX4Q9NWD9 120 aaPredicted RBP4.79□□□□□ -1.64
CDC42BPA-211ENST00000466538 ALKBH4Q9NXW9 302 aa4.79□□□□□ -1.64
CDC42BPA-211ENST00000466538 HCN3Q9P1Z3 774 aa4.79□□□□□ -1.64
CDC42BPA-211ENST00000466538 SLC25A13Q9UJS0 675 aa4.79□□□□□ -1.64
CDC42BPA-211ENST00000466538 PKP3Q9Y446 797 aa4.79□□□□□ -1.64
CDC42BPA-211ENST00000466538 KRTAP9-7A8MTY7 169 aa4.78□□□□□ -1.64
CDC42BPA-211ENST00000466538 CYP2D6P10635 497 aa4.78□□□□□ -1.64
CDC42BPA-211ENST00000466538 AKR1A1P14550 325 aa4.78□□□□□ -1.64
CDC42BPA-211ENST00000466538 CAPN3P20807 821 aa4.78□□□□□ -1.64
CDC42BPA-211ENST00000466538 TACR3P29371 465 aa4.78□□□□□ -1.64
CDC42BPA-211ENST00000466538 IDUAP35475 653 aa4.78□□□□□ -1.64
CDC42BPA-211ENST00000466538 HNF1BP35680 557 aa4.78□□□□□ -1.64
CDC42BPA-211ENST00000466538 ACVRL1P37023 503 aa4.78□□□□□ -1.64
CDC42BPA-211ENST00000466538 ARL1P40616 181 aaPredicted RBP4.78□□□□□ -1.64
CDC42BPA-211ENST00000466538 INHBCP55103 352 aa4.78□□□□□ -1.64
CDC42BPA-211ENST00000466538 GALNT2Q10471 571 aa4.78□□□□□ -1.64
CDC42BPA-211ENST00000466538 ANXA2RQ3ZCQ2 193 aa4.78□□□□□ -1.64
CDC42BPA-211ENST00000466538 GXYLT1Q4G148 440 aa4.78□□□□□ -1.64
CDC42BPA-211ENST00000466538 VWA5B1Q5TIE3 1220 aa4.78□□□□□ -1.64
CDC42BPA-211ENST00000466538 FAM180BQ6P0A1 224 aa4.78□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 43 ms