RNA–Protein interactions for RNA: ENST00000465461.6

CUX1-207, Transcript of cut like homeobox 1, humanhuman

TSL 3

Gene CUX1, Length 502 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Exosome, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUX1-207ENST00000465461 POLR2EP19388 210 aaKnown RBP12.01□□□□□ -0.49
CUX1-207ENST00000465461 PRKCHP24723 683 aa12.01□□□□□ -0.49
CUX1-207ENST00000465461 MIPP30301 263 aa12.01□□□□□ -0.49
CUX1-207ENST00000465461 NTSR1P30989 418 aa12.01□□□□□ -0.49
CUX1-207ENST00000465461 ZNF177Q13360 481 aaPredicted RBP12.01□□□□□ -0.49
CUX1-207ENST00000465461 PTPRNQ16849 979 aa12.01□□□□□ -0.49
CUX1-207ENST00000465461 C5orf22Q49AR2 442 aa12.01□□□□□ -0.49
CUX1-207ENST00000465461 PITRM1Q5JRX3 1037 aa12.01□□□□□ -0.49
CUX1-207ENST00000465461 EOGTQ5NDL2 527 aa12.01□□□□□ -0.49
CUX1-207ENST00000465461 RNF219Q5W0B1 726 aaPredicted RBP12.01□□□□□ -0.49
CUX1-207ENST00000465461 RWDD4Q6NW29 188 aaKnown RBP12.01□□□□□ -0.49
CUX1-207ENST00000465461 LRRC31Q6UY01 552 aa12.01□□□□□ -0.49
CUX1-207ENST00000465461 H2AFVQ71UI9 128 aa12.01□□□□□ -0.49
CUX1-207ENST00000465461 CCDC117Q8IWD4 279 aaPredicted RBP12.01□□□□□ -0.49
CUX1-207ENST00000465461 TSTD1Q8NFU3 115 aa12.01□□□□□ -0.49
CUX1-207ENST00000465461 ACDQ96AP0 544 aa12.01□□□□□ -0.49
CUX1-207ENST00000465461 IRX2Q9BZI1 471 aaPredicted RBP12.01□□□□□ -0.49
CUX1-207ENST00000465461 TPSD1Q9BZJ3 242 aa12.01□□□□□ -0.49
CUX1-207ENST00000465461 KCNH6Q9H252 994 aa12.01□□□□□ -0.49
CUX1-207ENST00000465461 OSGEPQ9NPF4 335 aa12.01□□□□□ -0.49
CUX1-207ENST00000465461 NDFIP2Q9NV92 336 aa12.01□□□□□ -0.49
CUX1-207ENST00000465461 KIAA1522Q9P206 1035 aaPredicted RBP12.01□□□□□ -0.49
CUX1-207ENST00000465461 CTTNBP2NLQ9P2B4 639 aa12.01□□□□□ -0.49
CUX1-207ENST00000465461 ANAPC7Q9UJX3 599 aa12.01□□□□□ -0.49
CUX1-207ENST00000465461 INVSQ9Y283 1065 aa12.01□□□□□ -0.49
CUX1-207ENST00000465461 IGLV3-10A0A075B6K4 115 aa12□□□□□ -0.49
CUX1-207ENST00000465461 A0A0D9SEW6 157 aa12□□□□□ -0.49
CUX1-207ENST00000465461 A0A1W2PQF6 199 aa12□□□□□ -0.49
CUX1-207ENST00000465461 TCRBV21S2A2A0A5A6 115 aa12□□□□□ -0.49
CUX1-207ENST00000465461 TMEM110-MUSTN1A8MSY1 372 aa12□□□□□ -0.49
CUX1-207ENST00000465461 CREB3O43889 395 aa12□□□□□ -0.49
CUX1-207ENST00000465461 LRCH4O75427 683 aa12□□□□□ -0.49
CUX1-207ENST00000465461 RNF8O76064 485 aa12□□□□□ -0.49
CUX1-207ENST00000465461 LRIG2O94898 1065 aa12□□□□□ -0.49
CUX1-207ENST00000465461 IL1R2P27930 398 aa12□□□□□ -0.49
CUX1-207ENST00000465461 CDC25BP30305 580 aa12□□□□□ -0.49
CUX1-207ENST00000465461 CDH4P55283 916 aa12□□□□□ -0.49
CUX1-207ENST00000465461 MTA1Q13330 715 aa12□□□□□ -0.49
CUX1-207ENST00000465461 PLEKHG6Q3KR16 790 aa12□□□□□ -0.49
CUX1-207ENST00000465461 FNDC3BQ53EP0 1204 aaKnown RBP12□□□□□ -0.49
CUX1-207ENST00000465461 EFHC2Q5JST6 749 aa12□□□□□ -0.49
CUX1-207ENST00000465461 KCNT1Q5JUK3 1230 aa12□□□□□ -0.49
CUX1-207ENST00000465461 TTC39BQ5VTQ0 682 aaPredicted RBP12□□□□□ -0.49
CUX1-207ENST00000465461 TXNRD3NBQ6F5E7 133 aa12□□□□□ -0.49
CUX1-207ENST00000465461 SDE2Q6IQ49 451 aa12□□□□□ -0.49
CUX1-207ENST00000465461 ANO7Q6IWH7 933 aa12□□□□□ -0.49
CUX1-207ENST00000465461 CYP4V2Q6ZWL3 525 aaPredicted RBP12□□□□□ -0.49
CUX1-207ENST00000465461 CCDC26Q8TAB7 109 aa12□□□□□ -0.49
CUX1-207ENST00000465461 ZNF564Q8TBZ8 553 aaPredicted RBP12□□□□□ -0.49
CUX1-207ENST00000465461 WFIKKN2Q8TEU8 576 aa12□□□□□ -0.49
CUX1-207ENST00000465461 FNIP1Q8TF40 1166 aa12□□□□□ -0.49
CUX1-207ENST00000465461 UCMAQ8WVF2 138 aa12□□□□□ -0.49
CUX1-207ENST00000465461 HMGB4Q8WW32 186 aa12□□□□□ -0.49
CUX1-207ENST00000465461 CTNNBL1Q8WYA6 563 aaPredicted RBP12□□□□□ -0.49
CUX1-207ENST00000465461 NTAN1Q96AB6 310 aa12□□□□□ -0.49
CUX1-207ENST00000465461 RPL10LQ96L21 214 aaKnown RBP12□□□□□ -0.49
CUX1-207ENST00000465461 SNRNP25Q9BV90 132 aaKnown RBP12□□□□□ -0.49
CUX1-207ENST00000465461 ZYG11BQ9C0D3 744 aa12□□□□□ -0.49
CUX1-207ENST00000465461 OSBPL2Q9H1P3 480 aa12□□□□□ -0.49
CUX1-207ENST00000465461 ZWILCHQ9H900 591 aa12□□□□□ -0.49
CUX1-207ENST00000465461 DNAI1Q9UI46 699 aa12□□□□□ -0.49
CUX1-207ENST00000465461 NEU3Q9UQ49 428 aa12□□□□□ -0.49
CUX1-207ENST00000465461 HRO43593 1189 aa11.99□□□□□ -0.49
CUX1-207ENST00000465461 CLDN11O75508 207 aa11.99□□□□□ -0.49
CUX1-207ENST00000465461 PAPSS2O95340 614 aaPredicted RBP11.99□□□□□ -0.49
CUX1-207ENST00000465461 RHOCP08134 193 aa11.99□□□□□ -0.49
CUX1-207ENST00000465461 TMEM253P0C7T8 217 aa11.99□□□□□ -0.49
CUX1-207ENST00000465461 OR1E1P30953 314 aa11.99□□□□□ -0.49
CUX1-207ENST00000465461 STK19P49842 368 aaPredicted RBP11.99□□□□□ -0.49
CUX1-207ENST00000465461 DGKEP52429 567 aa11.99□□□□□ -0.49
CUX1-207ENST00000465461 SCAPQ12770 1279 aa11.99□□□□□ -0.49
CUX1-207ENST00000465461 EIF4HQ15056 248 aaKnown RBP11.99□□□□□ -0.49
CUX1-207ENST00000465461 SMTNL2Q2TAL5 461 aa11.99□□□□□ -0.49
CUX1-207ENST00000465461 ZNF528Q3MIS6 628 aa11.99□□□□□ -0.49
CUX1-207ENST00000465461 MANEALQ5VSG8 457 aa11.99□□□□□ -0.49
CUX1-207ENST00000465461 RAD9BQ6WBX8 426 aa11.99□□□□□ -0.49
CUX1-207ENST00000465461 PGBD3Q8N328 593 aa11.99□□□□□ -0.49
CUX1-207ENST00000465461 FRMD1Q8N878 549 aa11.99□□□□□ -0.49
CUX1-207ENST00000465461 NETO2Q8NC67 525 aa11.99□□□□□ -0.49
CUX1-207ENST00000465461 MDGA1Q8NFP4 955 aa11.99□□□□□ -0.49
CUX1-207ENST00000465461 OR7D4Q8NG98 312 aa11.99□□□□□ -0.49
CUX1-207ENST00000465461 SLC35G2Q8TBE7 412 aa11.99□□□□□ -0.49
CUX1-207ENST00000465461 KCNV2Q8TDN2 545 aa11.99□□□□□ -0.49
CUX1-207ENST00000465461 NELL1Q92832 810 aa11.99□□□□□ -0.49
CUX1-207ENST00000465461 TTC17Q96AE7 1141 aa11.99□□□□□ -0.49
CUX1-207ENST00000465461 ALG14Q96F25 216 aa11.99□□□□□ -0.49
CUX1-207ENST00000465461 MYO19Q96H55 970 aa11.99□□□□□ -0.49
CUX1-207ENST00000465461 MRGPRX3Q96LB0 322 aa11.99□□□□□ -0.49
CUX1-207ENST00000465461 PANX2Q96RD6 677 aa11.99□□□□□ -0.49
CUX1-207ENST00000465461 KCTD15Q96SI1 283 aaPredicted RBP11.99□□□□□ -0.49
CUX1-207ENST00000465461 GABRG3Q99928 467 aa11.99□□□□□ -0.49
CUX1-207ENST00000465461 MUC3BQ9H195 1237 aa11.99□□□□□ -0.49
CUX1-207ENST00000465461 DHX35Q9H5Z1 703 aaKnown RBP11.99□□□□□ -0.49
CUX1-207ENST00000465461 CD93Q9NPY3 652 aa11.99□□□□□ -0.49
CUX1-207ENST00000465461 ZSCAN32Q9NX65 697 aa11.99□□□□□ -0.49
CUX1-207ENST00000465461 ZNF212Q9UDV6 495 aa11.99□□□□□ -0.49
CUX1-207ENST00000465461 IP6K2Q9UHH9 426 aa11.99□□□□□ -0.49
CUX1-207ENST00000465461 SLCO3A1Q9UIG8 710 aa11.99□□□□□ -0.49
CUX1-207ENST00000465461 USP18Q9UMW8 372 aa11.99□□□□□ -0.49
CUX1-207ENST00000465461 PLA2G4CQ9UP65 541 aa11.99□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms