RNA–Protein interactions for RNA: ENST00000465457.1

HDAC6-215, Transcript of histone deacetylase 6, humanhuman

TSL 5

Gene HDAC6, Length 563 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-215ENST00000465457 FAM170AA1A519 330 aa14.34□□□□□ -0.11
HDAC6-215ENST00000465457 OR6C75A6NL08 312 aa14.34□□□□□ -0.11
HDAC6-215ENST00000465457 MAP2K7O14733 419 aa14.34□□□□□ -0.11
HDAC6-215ENST00000465457 ERBB2P04626 1255 aa14.34□□□□□ -0.11
HDAC6-215ENST00000465457 PSMA2P25787 234 aa14.34□□□□□ -0.11
HDAC6-215ENST00000465457 RPL7AP62424 266 aaKnown RBP14.34□□□□□ -0.11
HDAC6-215ENST00000465457 GUCY2DQ02846 1103 aa14.34□□□□□ -0.11
HDAC6-215ENST00000465457 SEMA3BQ13214 749 aa14.34□□□□□ -0.11
HDAC6-215ENST00000465457 ORC1Q13415 861 aa14.34□□□□□ -0.11
HDAC6-215ENST00000465457 C2CD6Q53TS8 623 aa14.34□□□□□ -0.11
HDAC6-215ENST00000465457 TXNDC8Q6A555 127 aa14.34□□□□□ -0.11
HDAC6-215ENST00000465457 OVOS1Q6IE37 1185 aa14.34□□□□□ -0.11
HDAC6-215ENST00000465457 SYDE1Q6ZW31 735 aaPredicted RBP14.34□□□□□ -0.11
HDAC6-215ENST00000465457 TMEM110Q86TL2 294 aa14.34□□□□□ -0.11
HDAC6-215ENST00000465457 ACOT1Q86TX2 421 aa14.34□□□□□ -0.11
HDAC6-215ENST00000465457 SFTPA1Q8IWL2 248 aa14.34□□□□□ -0.11
HDAC6-215ENST00000465457 TMEFF1Q8IYR6 380 aa14.34□□□□□ -0.11
HDAC6-215ENST00000465457 ANKRD52Q8NB46 1076 aa14.34□□□□□ -0.11
HDAC6-215ENST00000465457 TTC16Q8NEE8 873 aa14.34□□□□□ -0.11
HDAC6-215ENST00000465457 AENQ8WTP8 325 aaKnown RBP14.34□□□□□ -0.11
HDAC6-215ENST00000465457 GRK7Q8WTQ7 553 aa14.34□□□□□ -0.11
HDAC6-215ENST00000465457 SLCO2A1Q92959 643 aa14.34□□□□□ -0.11
HDAC6-215ENST00000465457 ACDQ96AP0 544 aa14.34□□□□□ -0.11
HDAC6-215ENST00000465457 CRELD1Q96HD1 420 aa14.34□□□□□ -0.11
HDAC6-215ENST00000465457 SLC4A5Q9BY07 1137 aa14.34□□□□□ -0.11
HDAC6-215ENST00000465457 TRIM7Q9C029 511 aa14.34□□□□□ -0.11
HDAC6-215ENST00000465457 DDX47Q9H0S4 455 aaKnown RBP14.34□□□□□ -0.11
HDAC6-215ENST00000465457 ASNSD1Q9NWL6 643 aa14.34□□□□□ -0.11
HDAC6-215ENST00000465457 EVLQ9UI08 416 aaPredicted RBP14.34□□□□□ -0.11
HDAC6-215ENST00000465457 CYTH4Q9UIA0 394 aa14.34□□□□□ -0.11
HDAC6-215ENST00000465457 EFR3BQ9Y2G0 817 aa14.34□□□□□ -0.11
HDAC6-215ENST00000465457 ASB3Q9Y575 518 aa14.34□□□□□ -0.11
HDAC6-215ENST00000465457 SHROOM3Q8TF72 1996 aa14.34□□□□□ -0.11
HDAC6-215ENST00000465457 URB1O60287 2271 aaKnown RBP14.33□□□□□ -0.12
HDAC6-215ENST00000465457 FAM221BA6H8Z2 402 aa14.33□□□□□ -0.12
HDAC6-215ENST00000465457 BHMG1C9JSJ3 638 aaPredicted RBP14.33□□□□□ -0.12
HDAC6-215ENST00000465457 GOLGA8SH3BPF8 625 aa14.33□□□□□ -0.12
HDAC6-215ENST00000465457 CYB561D2O14569 222 aa14.33□□□□□ -0.12
HDAC6-215ENST00000465457 GABRDO14764 452 aa14.33□□□□□ -0.12
HDAC6-215ENST00000465457 RNF8O76064 485 aa14.33□□□□□ -0.12
HDAC6-215ENST00000465457 SEC31AO94979 1220 aaKnown RBP14.33□□□□□ -0.12
HDAC6-215ENST00000465457 GLI1P08151 1106 aa14.33□□□□□ -0.12
HDAC6-215ENST00000465457 ODC1P11926 461 aa14.33□□□□□ -0.12
HDAC6-215ENST00000465457 CDC25CP30307 473 aa14.33□□□□□ -0.12
HDAC6-215ENST00000465457 PCK1P35558 622 aa14.33□□□□□ -0.12
HDAC6-215ENST00000465457 SSR1P43307 286 aaKnown RBP14.33□□□□□ -0.12
HDAC6-215ENST00000465457 GPR15P49685 360 aa14.33□□□□□ -0.12
HDAC6-215ENST00000465457 ZNF143P52747 638 aaPredicted RBP14.33□□□□□ -0.12
HDAC6-215ENST00000465457 DRG2P55039 364 aaKnown RBP14.33□□□□□ -0.12
HDAC6-215ENST00000465457 MGAT5BQ3V5L5 792 aa14.33□□□□□ -0.12
HDAC6-215ENST00000465457 SLC39A12Q504Y0 691 aa14.33□□□□□ -0.12
HDAC6-215ENST00000465457 USP39Q53GS9 565 aaKnown RBP14.33□□□□□ -0.12
HDAC6-215ENST00000465457 C2orf27AQ580R0 203 aa14.33□□□□□ -0.12
HDAC6-215ENST00000465457 PPP1R26Q5T8A7 1209 aaPredicted RBP14.33□□□□□ -0.12
HDAC6-215ENST00000465457 FAM102AQ5T9C2 384 aaPredicted RBP14.33□□□□□ -0.12
HDAC6-215ENST00000465457 ARCQ7LC44 396 aa14.33□□□□□ -0.12
HDAC6-215ENST00000465457 RAB44Q7Z6P3 723 aaPredicted RBP14.33□□□□□ -0.12
HDAC6-215ENST00000465457 PHLDB2Q86SQ0 1253 aa14.33□□□□□ -0.12
HDAC6-215ENST00000465457 ITIH5Q86UX2 942 aa14.33□□□□□ -0.12
HDAC6-215ENST00000465457 TTC30AQ86WT1 665 aa14.33□□□□□ -0.12
HDAC6-215ENST00000465457 B3GALNT2Q8NCR0 500 aa14.33□□□□□ -0.12
HDAC6-215ENST00000465457 MDM1Q8TC05 714 aa14.33□□□□□ -0.12
HDAC6-215ENST00000465457 ADAM32Q8TC27 787 aa14.33□□□□□ -0.12
HDAC6-215ENST00000465457 SLC35F5Q8WV83 523 aa14.33□□□□□ -0.12
HDAC6-215ENST00000465457 SEC14L1Q92503 715 aa14.33□□□□□ -0.12
HDAC6-215ENST00000465457 HSFY1Q96LI6 401 aa14.33□□□□□ -0.12
HDAC6-215ENST00000465457 SLC22A12Q96S37 553 aa14.33□□□□□ -0.12
HDAC6-215ENST00000465457 CNPY3Q9BT09 278 aa14.33□□□□□ -0.12
HDAC6-215ENST00000465457 SLC32A1Q9H598 525 aa14.33□□□□□ -0.12
HDAC6-215ENST00000465457 LRRC19Q9H756 370 aa14.33□□□□□ -0.12
HDAC6-215ENST00000465457 ECT2Q9H8V3 914 aa14.33□□□□□ -0.12
HDAC6-215ENST00000465457 EPB41L5Q9HCM4 733 aa14.33□□□□□ -0.12
HDAC6-215ENST00000465457 FAM53CQ9NYF3 392 aa14.33□□□□□ -0.12
HDAC6-215ENST00000465457 WNT6Q9Y6F9 365 aa14.33□□□□□ -0.12
HDAC6-215ENST00000465457 KALRNO60229 2985 aa14.33□□□□□ -0.12
HDAC6-215ENST00000465457 TENM4Q6N022 2769 aa14.33□□□□□ -0.12
HDAC6-215ENST00000465457 FGF19O95750 216 aa14.32□□□□□ -0.12
HDAC6-215ENST00000465457 PRB1P04280 392 aa14.32□□□□□ -0.12
HDAC6-215ENST00000465457 GPD1P21695 349 aa14.32□□□□□ -0.12
HDAC6-215ENST00000465457 PCSK1P29120 753 aa14.32□□□□□ -0.12
HDAC6-215ENST00000465457 RFC1P35251 1148 aaPredicted RBP14.32□□□□□ -0.12
HDAC6-215ENST00000465457 AVPR1AP37288 418 aa14.32□□□□□ -0.12
HDAC6-215ENST00000465457 TNNT3P45378 269 aaPredicted RBP14.32□□□□□ -0.12
HDAC6-215ENST00000465457 RPL34P49207 117 aaKnown RBP14.32□□□□□ -0.12
HDAC6-215ENST00000465457 SLC7A5Q01650 507 aa14.32□□□□□ -0.12
HDAC6-215ENST00000465457 CASP8Q14790 479 aa14.32□□□□□ -0.12
HDAC6-215ENST00000465457 FBXO43Q4G163 708 aa14.32□□□□□ -0.12
HDAC6-215ENST00000465457 TMEM92Q6UXU6 159 aa14.32□□□□□ -0.12
HDAC6-215ENST00000465457 DSTYKQ6XUX3 929 aa14.32□□□□□ -0.12
HDAC6-215ENST00000465457 METTL23Q86XA0 190 aa14.32□□□□□ -0.12
HDAC6-215ENST00000465457 CCDC50Q8IVM0 306 aa14.32□□□□□ -0.12
HDAC6-215ENST00000465457 CCDC33Q8N5R6 958 aa14.32□□□□□ -0.12
HDAC6-215ENST00000465457 PRELID2Q8N945 189 aa14.32□□□□□ -0.12
HDAC6-215ENST00000465457 UBA3Q8TBC4 463 aa14.32□□□□□ -0.12
HDAC6-215ENST00000465457 USP33Q8TEY7 942 aa14.32□□□□□ -0.12
HDAC6-215ENST00000465457 MAGOHBQ96A72 148 aaKnown RBP14.32□□□□□ -0.12
HDAC6-215ENST00000465457 CAMK1GQ96NX5 476 aa14.32□□□□□ -0.12
HDAC6-215ENST00000465457 GCNAQ96QF7 691 aa14.32□□□□□ -0.12
HDAC6-215ENST00000465457 HNRNPABQ99729 332 aaKnown RBP14.32□□□□□ -0.12
HDAC6-215ENST00000465457 FRMD8P1Q9BZ68 369 aaPredicted RBP14.32□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms