RNA–Protein interactions for RNA: ENST00000465278.2

CACNA1C-223, Transcript of calcium voltage-gated channel subunit alpha1 C, human

TSL 3

Gene CACNA1C, Length 831 nt, Biotype protein coding, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CACNA1C-223	ENST00000465278	PEG10	Q86TG7	708 aa	Known RBP	5.72	□□□□□ -1.49
CACNA1C-223	ENST00000465278	FAM227B	Q96M60	508 aa		5.72	□□□□□ -1.49
CACNA1C-223	ENST00000465278	COQ10A	Q96MF6	247 aa		5.72	□□□□□ -1.49
CACNA1C-223	ENST00000465278	EIF2A	Q9BY44	585 aa	Known RBP	5.72	□□□□□ -1.49
CACNA1C-223	ENST00000465278	STK33	Q9BYT3	514 aa		5.72	□□□□□ -1.49
CACNA1C-223	ENST00000465278	PPCS	Q9HAB8	311 aa		5.72	□□□□□ -1.49
CACNA1C-223	ENST00000465278	ZBTB26	Q9HCK0	441 aa		5.72	□□□□□ -1.49
CACNA1C-223	ENST00000465278	OBP2B	Q9NPH6	170 aa		5.72	□□□□□ -1.49
CACNA1C-223	ENST00000465278	ING1	Q9UK53	422 aa	Predicted RBP	5.72	□□□□□ -1.49
CACNA1C-223	ENST00000465278	AOX1	Q06278	1338 aa		5.72	□□□□□ -1.49
CACNA1C-223	ENST00000465278	FNDC1	Q4ZHG4	1894 aa	Predicted RBP	5.71	□□□□□ -1.5
CACNA1C-223	ENST00000465278	KTN1	Q86UP2	1357 aa	Known RBP	5.71	□□□□□ -1.5
CACNA1C-223	ENST00000465278	HSFX4	A0A1B0GTS1	333 aa	Predicted RBP	5.71	□□□□□ -1.5
CACNA1C-223	ENST00000465278	HSFX3	A0A1B0GWH4	333 aa	Predicted RBP	5.71	□□□□□ -1.5
CACNA1C-223	ENST00000465278	TMEM191C	A6NGB0	347 aa		5.71	□□□□□ -1.5
CACNA1C-223	ENST00000465278	AQP12B	A6NM10	295 aa		5.71	□□□□□ -1.5
CACNA1C-223	ENST00000465278	AP4M1	O00189	453 aa		5.71	□□□□□ -1.5
CACNA1C-223	ENST00000465278	SNX2	O60749	519 aa		5.71	□□□□□ -1.5
CACNA1C-223	ENST00000465278	SRGAP2B	P0DMP2	458 aa		5.71	□□□□□ -1.5
CACNA1C-223	ENST00000465278	TGM1	P22735	817 aa		5.71	□□□□□ -1.5
CACNA1C-223	ENST00000465278	EPHA3	P29320	983 aa		5.71	□□□□□ -1.5
CACNA1C-223	ENST00000465278	CYP2C18	P33260	490 aa		5.71	□□□□□ -1.5
CACNA1C-223	ENST00000465278	TIRAP	P58753	221 aa		5.71	□□□□□ -1.5
CACNA1C-223	ENST00000465278	PFKFB4	Q16877	469 aa		5.71	□□□□□ -1.5
CACNA1C-223	ENST00000465278	TUBB8	Q3ZCM7	444 aa		5.71	□□□□□ -1.5
CACNA1C-223	ENST00000465278	LRRC71	Q8N4P6	559 aa		5.71	□□□□□ -1.5
CACNA1C-223	ENST00000465278	METTL25	Q8N6Q8	603 aa		5.71	□□□□□ -1.5
CACNA1C-223	ENST00000465278	GPR150	Q8NGU9	434 aa		5.71	□□□□□ -1.5
CACNA1C-223	ENST00000465278	ACTRT2	Q8TDY3	377 aa		5.71	□□□□□ -1.5
CACNA1C-223	ENST00000465278	ALG8	Q9BVK2	526 aa		5.71	□□□□□ -1.5
CACNA1C-223	ENST00000465278	SELENOO	Q9BVL4	669 aa		5.71	□□□□□ -1.5
CACNA1C-223	ENST00000465278	XRN2	Q9H0D6	950 aa	Known RBP eCLIP	5.71	□□□□□ -1.5
CACNA1C-223	ENST00000465278	EPS8L2	Q9H6S3	715 aa		5.71	□□□□□ -1.5
CACNA1C-223	ENST00000465278	ARHGEF3	Q9NR81	526 aa		5.71	□□□□□ -1.5
CACNA1C-223	ENST00000465278	TM7SF3	Q9NS93	570 aa		5.71	□□□□□ -1.5
CACNA1C-223	ENST00000465278	TMOD4	Q9NZQ9	345 aa		5.71	□□□□□ -1.5
CACNA1C-223	ENST00000465278	ZBTB1	Q9Y2K1	713 aa		5.71	□□□□□ -1.5
CACNA1C-223	ENST00000465278	SLC27A6	Q9Y2P4	619 aa		5.71	□□□□□ -1.5
CACNA1C-223	ENST00000465278	WDFY3	Q8IZQ1	3526 aa		5.7	□□□□□ -1.5
CACNA1C-223	ENST00000465278	LINC00473	A8K010	186 aa		5.7	□□□□□ -1.5
CACNA1C-223	ENST00000465278	PSMD9	O00233	223 aa		5.7	□□□□□ -1.5
CACNA1C-223	ENST00000465278	CCNT2	O60583	730 aa	Known RBP	5.7	□□□□□ -1.5
CACNA1C-223	ENST00000465278	USP1	O94782	785 aa		5.7	□□□□□ -1.5
CACNA1C-223	ENST00000465278	FAM163B	P0C2L3	166 aa		5.7	□□□□□ -1.5
CACNA1C-223	ENST00000465278	JUP	P14923	745 aa		5.7	□□□□□ -1.5
CACNA1C-223	ENST00000465278	GRIA3	P42263	894 aa		5.7	□□□□□ -1.5
CACNA1C-223	ENST00000465278	PSMC4	P43686	418 aa		5.7	□□□□□ -1.5
CACNA1C-223	ENST00000465278	PRKCZ	Q05513	592 aa		5.7	□□□□□ -1.5
CACNA1C-223	ENST00000465278	KLF10	Q13118	480 aa		5.7	□□□□□ -1.5
CACNA1C-223	ENST00000465278	ZNF169	Q14929	603 aa	Predicted RBP	5.7	□□□□□ -1.5
CACNA1C-223	ENST00000465278	MAPKAPK3	Q16644	382 aa		5.7	□□□□□ -1.5
CACNA1C-223	ENST00000465278	ZNF618	Q5T7W0	954 aa		5.7	□□□□□ -1.5
CACNA1C-223	ENST00000465278	MZT2A	Q6P582	158 aa		5.7	□□□□□ -1.5
CACNA1C-223	ENST00000465278	GPATCH11	Q8N954	259 aa		5.7	□□□□□ -1.5
CACNA1C-223	ENST00000465278	ATG16L2	Q8NAA4	619 aa		5.7	□□□□□ -1.5
CACNA1C-223	ENST00000465278	CYP2W1	Q8TAV3	490 aa		5.7	□□□□□ -1.5
CACNA1C-223	ENST00000465278	PBK	Q96KB5	322 aa		5.7	□□□□□ -1.5
CACNA1C-223	ENST00000465278	INO80B	Q9C086	356 aa	Predicted RBP	5.7	□□□□□ -1.5
CACNA1C-223	ENST00000465278	CHMP4B	Q9H444	224 aa	Known RBP	5.7	□□□□□ -1.5
CACNA1C-223	ENST00000465278	PRKRIP1	Q9H875	184 aa	Predicted RBP	5.7	□□□□□ -1.5
CACNA1C-223	ENST00000465278	LPAR3	Q9UBY5	353 aa		5.7	□□□□□ -1.5
CACNA1C-223	ENST00000465278	SCAF8	Q9UPN6	1271 aa	Known RBP	5.7	□□□□□ -1.5
CACNA1C-223	ENST00000465278	GAK	O14976	1311 aa		5.7	□□□□□ -1.5
CACNA1C-223	ENST00000465278	EP300	Q09472	2414 aa	Predicted RBP	5.69	□□□□□ -1.5
CACNA1C-223	ENST00000465278	FBN3	Q75N90	2809 aa		5.69	□□□□□ -1.5
CACNA1C-223	ENST00000465278	ITPR3	Q14573	2671 aa		5.69	□□□□□ -1.5
CACNA1C-223	ENST00000465278	LGALS16	A8MUM7	142 aa		5.69	□□□□□ -1.5
CACNA1C-223	ENST00000465278	ERVV-2	B6SEH9	535 aa		5.69	□□□□□ -1.5
CACNA1C-223	ENST00000465278	TAF4	O00268	1085 aa		5.69	□□□□□ -1.5
CACNA1C-223	ENST00000465278	PSMD14	O00487	310 aa		5.69	□□□□□ -1.5
CACNA1C-223	ENST00000465278	ZSCAN9	O15535	394 aa	Predicted RBP	5.69	□□□□□ -1.5
CACNA1C-223	ENST00000465278	AR	P10275	920 aa		5.69	□□□□□ -1.5
CACNA1C-223	ENST00000465278	ENG	P17813	658 aa		5.69	□□□□□ -1.5
CACNA1C-223	ENST00000465278	EGR1	P18146	543 aa		5.69	□□□□□ -1.5
CACNA1C-223	ENST00000465278	CHKA	P35790	457 aa		5.69	□□□□□ -1.5
CACNA1C-223	ENST00000465278	MTHFS	P49914	203 aa		5.69	□□□□□ -1.5
CACNA1C-223	ENST00000465278	IRX6	P78412	446 aa	Predicted RBP	5.69	□□□□□ -1.5
CACNA1C-223	ENST00000465278	TIAL1	Q01085	375 aa	Known RBP eCLIP	5.69	□□□□□ -1.5
CACNA1C-223	ENST00000465278	GPS1	Q13098	491 aa		5.69	□□□□□ -1.5
CACNA1C-223	ENST00000465278	FHL2	Q14192	279 aa		5.69	□□□□□ -1.5
CACNA1C-223	ENST00000465278	GRAMD1B	Q3KR37	738 aa		5.69	□□□□□ -1.5
CACNA1C-223	ENST00000465278	CCDC38	Q502W7	563 aa		5.69	□□□□□ -1.5
CACNA1C-223	ENST00000465278	USP17L6P	Q6QN14	398 aa		5.69	□□□□□ -1.5
CACNA1C-223	ENST00000465278	FSTL5	Q8N475	847 aa	Predicted RBP	5.69	□□□□□ -1.5
CACNA1C-223	ENST00000465278	MORC4	Q8TE76	937 aa		5.69	□□□□□ -1.5
CACNA1C-223	ENST00000465278	STYX	Q8WUJ0	223 aa		5.69	□□□□□ -1.5
CACNA1C-223	ENST00000465278	SOCS4	Q8WXH5	440 aa		5.69	□□□□□ -1.5
CACNA1C-223	ENST00000465278	GRAMD1A	Q96CP6	724 aa		5.69	□□□□□ -1.5
CACNA1C-223	ENST00000465278	VN1R3	Q9BXE9	311 aa		5.69	□□□□□ -1.5
CACNA1C-223	ENST00000465278	SCAND2P	Q9GZW5	306 aa	Predicted RBP	5.69	□□□□□ -1.5
CACNA1C-223	ENST00000465278	PRDM16	Q9HAZ2	1276 aa		5.69	□□□□□ -1.5
CACNA1C-223	ENST00000465278	IL17RB	Q9NRM6	502 aa		5.69	□□□□□ -1.5
CACNA1C-223	ENST00000465278	SERTAD4	Q9NUC0	356 aa		5.69	□□□□□ -1.5
CACNA1C-223	ENST00000465278	FOXJ2	Q9P0K8	574 aa		5.69	□□□□□ -1.5
CACNA1C-223	ENST00000465278	VPS51	Q9UID3	782 aa		5.69	□□□□□ -1.5
CACNA1C-223	ENST00000465278	ANKRD36C	Q5JPF3	1778 aa		5.68	□□□□□ -1.5
CACNA1C-223	ENST00000465278	IFRD1	O00458	451 aa	Predicted RBP	5.68	□□□□□ -1.5
CACNA1C-223	ENST00000465278	NPC1	O15118	1278 aa		5.68	□□□□□ -1.5
CACNA1C-223	ENST00000465278	RAMP2	O60895	175 aa		5.68	□□□□□ -1.5
CACNA1C-223	ENST00000465278	NBN	O60934	754 aa		5.68	□□□□□ -1.5

Retrieved 100 of 20,778 RNA–protein pairs in 41.5 ms