RNA–Protein interactions for RNA: ENST00000464628.1

SCAF8-205, Transcript of SR-related CTD associated factor 8, humanhuman

TSL 5

Gene SCAF8, Length 468 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF8-205ENST00000464628 WIPF3A6NGB9 483 aa11.83□□□□□ -0.52
SCAF8-205ENST00000464628 TBC1D3LB9A6J9 549 aa11.83□□□□□ -0.52
SCAF8-205ENST00000464628 NVLO15381 856 aaKnown RBP11.83□□□□□ -0.52
SCAF8-205ENST00000464628 RNASEH1O60930 286 aaKnown RBP11.83□□□□□ -0.52
SCAF8-205ENST00000464628 CLDN1O95832 211 aa11.83□□□□□ -0.52
SCAF8-205ENST00000464628 CST3P01034 146 aaPredicted RBP11.83□□□□□ -0.52
SCAF8-205ENST00000464628 TBC1D3HP0C7X1 549 aa11.83□□□□□ -0.52
SCAF8-205ENST00000464628 CCDC130P13994 396 aa11.83□□□□□ -0.52
SCAF8-205ENST00000464628 GARTP22102 1010 aa11.83□□□□□ -0.52
SCAF8-205ENST00000464628 CD70P32970 193 aa11.83□□□□□ -0.52
SCAF8-205ENST00000464628 NUDT1P36639 197 aa11.83□□□□□ -0.52
SCAF8-205ENST00000464628 PSMD8P48556 350 aa11.83□□□□□ -0.52
SCAF8-205ENST00000464628 MAP3K7CLP57077 242 aa11.83□□□□□ -0.52
SCAF8-205ENST00000464628 EIF3IQ13347 325 aaKnown RBP11.83□□□□□ -0.52
SCAF8-205ENST00000464628 ARID5BQ14865 1188 aa11.83□□□□□ -0.52
SCAF8-205ENST00000464628 POM121L1PQ3SYA9 428 aa11.83□□□□□ -0.52
SCAF8-205ENST00000464628 MPPE1Q53F39 396 aa11.83□□□□□ -0.52
SCAF8-205ENST00000464628 TBC1D3GQ6DHY5 549 aa11.83□□□□□ -0.52
SCAF8-205ENST00000464628 TBC1D3CQ6IPX1 549 aa11.83□□□□□ -0.52
SCAF8-205ENST00000464628 DTHD1Q6ZMT9 781 aa11.83□□□□□ -0.52
SCAF8-205ENST00000464628 RAB11FIP2Q7L804 512 aa11.83□□□□□ -0.52
SCAF8-205ENST00000464628 ZNF720Q7Z2F6 126 aa11.83□□□□□ -0.52
SCAF8-205ENST00000464628 TRIM69Q86WT6 500 aa11.83□□□□□ -0.52
SCAF8-205ENST00000464628 TBC1D3Q8IZP1 549 aaPredicted RBP11.83□□□□□ -0.52
SCAF8-205ENST00000464628 FBXO39Q8N4B4 442 aa11.83□□□□□ -0.52
SCAF8-205ENST00000464628 FAM129BQ96TA1 746 aa11.83□□□□□ -0.52
SCAF8-205ENST00000464628 CBWD1Q9BRT8 395 aa11.83□□□□□ -0.52
SCAF8-205ENST00000464628 ZHX3Q9H4I2 956 aa11.83□□□□□ -0.52
SCAF8-205ENST00000464628 ZNF71Q9NQZ8 489 aaPredicted RBP11.83□□□□□ -0.52
SCAF8-205ENST00000464628 BLOC1S4Q9NUP1 217 aa11.83□□□□□ -0.52
SCAF8-205ENST00000464628 R3HCC1Q9Y3T6 440 aaKnown RBP11.83□□□□□ -0.52
SCAF8-205ENST00000464628 PRAMEF26H0Y7S4 382 aa11.82□□□□□ -0.52
SCAF8-205ENST00000464628 NTN3O00634 580 aaPredicted RBP11.82□□□□□ -0.52
SCAF8-205ENST00000464628 PLRG1O43660 514 aaKnown RBP11.82□□□□□ -0.52
SCAF8-205ENST00000464628 TNNC2P02585 160 aa11.82□□□□□ -0.52
SCAF8-205ENST00000464628 PRKCGP05129 697 aa11.82□□□□□ -0.52
SCAF8-205ENST00000464628 ATP5BP06576 529 aaKnown RBP11.82□□□□□ -0.52
SCAF8-205ENST00000464628 KRT7P08729 469 aa11.82□□□□□ -0.52
SCAF8-205ENST00000464628 SGSHP51688 502 aa11.82□□□□□ -0.52
SCAF8-205ENST00000464628 METAP1P53582 386 aa11.82□□□□□ -0.52
SCAF8-205ENST00000464628 COG7P83436 770 aa11.82□□□□□ -0.52
SCAF8-205ENST00000464628 DHX8Q14562 1220 aaKnown RBP11.82□□□□□ -0.52
SCAF8-205ENST00000464628 ME3Q16798 604 aa11.82□□□□□ -0.52
SCAF8-205ENST00000464628 DIEXFQ68CQ4 756 aaKnown RBP11.82□□□□□ -0.52
SCAF8-205ENST00000464628 MAMDC2Q7Z304 686 aaPredicted RBP11.82□□□□□ -0.52
SCAF8-205ENST00000464628 ZFAND4Q86XD8 727 aa11.82□□□□□ -0.52
SCAF8-205ENST00000464628 ZNF548Q8NEK5 533 aaPredicted RBP11.82□□□□□ -0.52
SCAF8-205ENST00000464628 OR13H1Q8NG92 308 aa11.82□□□□□ -0.52
SCAF8-205ENST00000464628 C9orf43Q8TAL5 461 aaPredicted RBP11.82□□□□□ -0.52
SCAF8-205ENST00000464628 LMLNQ96KR4 655 aa11.82□□□□□ -0.52
SCAF8-205ENST00000464628 CUEDC1Q9NWM3 386 aaPredicted RBP11.82□□□□□ -0.52
SCAF8-205ENST00000464628 FOXJ2Q9P0K8 574 aa11.82□□□□□ -0.52
SCAF8-205ENST00000464628 SEPT10Q9P0V9 454 aa11.82□□□□□ -0.52
SCAF8-205ENST00000464628 ITIH6Q6UXX5 1313 aa11.82□□□□□ -0.52
SCAF8-205ENST00000464628 PRAMEF33A0A0G2JMD5 474 aa11.81□□□□□ -0.52
SCAF8-205ENST00000464628 SLC12A8A0AV02 714 aa11.81□□□□□ -0.52
SCAF8-205ENST00000464628 NEMP2A6NFY4 417 aa11.81□□□□□ -0.52
SCAF8-205ENST00000464628 PRAMEF10O60809 474 aa11.81□□□□□ -0.52
SCAF8-205ENST00000464628 TBCAO75347 108 aaKnown RBP11.81□□□□□ -0.52
SCAF8-205ENST00000464628 ADH1BP00325 375 aa11.81□□□□□ -0.52
SCAF8-205ENST00000464628 C5AR1P21730 350 aa11.81□□□□□ -0.52
SCAF8-205ENST00000464628 GNLYP22749 145 aa11.81□□□□□ -0.52
SCAF8-205ENST00000464628 MLLT10P55197 1068 aa11.81□□□□□ -0.52
SCAF8-205ENST00000464628 TNNC1P63316 161 aa11.81□□□□□ -0.52
SCAF8-205ENST00000464628 EFEMP1Q12805 493 aa11.81□□□□□ -0.52
SCAF8-205ENST00000464628 SPIDRQ14159 915 aa11.81□□□□□ -0.52
SCAF8-205ENST00000464628 WDR72Q3MJ13 1102 aa11.81□□□□□ -0.52
SCAF8-205ENST00000464628 CLEC20AQ6ZU45 233 aa11.81□□□□□ -0.52
SCAF8-205ENST00000464628 TRAPPC11Q7Z392 1133 aa11.81□□□□□ -0.52
SCAF8-205ENST00000464628 SFR1Q86XK3 245 aa11.81□□□□□ -0.52
SCAF8-205ENST00000464628 WDR48Q8TAF3 677 aa11.81□□□□□ -0.52
SCAF8-205ENST00000464628 SLC2A14Q8TDB8 520 aa11.81□□□□□ -0.52
SCAF8-205ENST00000464628 CDK5RAP3Q96JB5 506 aa11.81□□□□□ -0.52
SCAF8-205ENST00000464628 NOX5Q96PH1 765 aa11.81□□□□□ -0.52
SCAF8-205ENST00000464628 MYOCQ99972 504 aa11.81□□□□□ -0.52
SCAF8-205ENST00000464628 SMYD3Q9H7B4 428 aa11.81□□□□□ -0.52
SCAF8-205ENST00000464628 EPB41L5Q9HCM4 733 aa11.81□□□□□ -0.52
SCAF8-205ENST00000464628 GPR27Q9NS67 375 aa11.81□□□□□ -0.52
SCAF8-205ENST00000464628 NAGPAQ9UK23 515 aa11.81□□□□□ -0.52
SCAF8-205ENST00000464628 NOL7Q9UMY1 257 aaKnown RBP11.81□□□□□ -0.52
SCAF8-205ENST00000464628 HIVEP1P15822 2718 aa11.81□□□□□ -0.52
SCAF8-205ENST00000464628 RIOK3O14730 519 aaKnown RBP11.8□□□□□ -0.52
SCAF8-205ENST00000464628 RNGTTO60942 597 aaKnown RBP11.8□□□□□ -0.52
SCAF8-205ENST00000464628 PRPF6O94906 941 aaKnown RBP11.8□□□□□ -0.52
SCAF8-205ENST00000464628 STAU1O95793 577 aaKnown RBP11.8□□□□□ -0.52
SCAF8-205ENST00000464628 POLR2EP19388 210 aaKnown RBP11.8□□□□□ -0.52
SCAF8-205ENST00000464628 ITIH1P19827 911 aa11.8□□□□□ -0.52
SCAF8-205ENST00000464628 MZF1P28698 734 aaPredicted RBP11.8□□□□□ -0.52
SCAF8-205ENST00000464628 PSEN1P49768 467 aa11.8□□□□□ -0.52
SCAF8-205ENST00000464628 MCM6Q14566 821 aa11.8□□□□□ -0.52
SCAF8-205ENST00000464628 DUOXA2Q1HG44 320 aa11.8□□□□□ -0.52
SCAF8-205ENST00000464628 SETMARQ53H47 684 aaPredicted RBP11.8□□□□□ -0.52
SCAF8-205ENST00000464628 ZNF542PQ5EBM4 170 aa11.8□□□□□ -0.52
SCAF8-205ENST00000464628 L1TD1Q5T7N2 865 aaKnown RBP11.8□□□□□ -0.52
SCAF8-205ENST00000464628 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP11.8□□□□□ -0.52
SCAF8-205ENST00000464628 CCDC186Q7Z3E2 898 aa11.8□□□□□ -0.52
SCAF8-205ENST00000464628 DSG4Q86SJ6 1040 aa11.8□□□□□ -0.52
SCAF8-205ENST00000464628 WDR49Q8IV35 697 aa11.8□□□□□ -0.52
SCAF8-205ENST00000464628 GPD1LQ8N335 351 aa11.8□□□□□ -0.52
SCAF8-205ENST00000464628 TTC17Q96AE7 1141 aa11.8□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms