RNA–Protein interactions for RNA: ENST00000464148.2

MRPL55-224, Transcript of mitochondrial ribosomal protein L55, humanhuman

TSL 5

Gene MRPL55, Length 636 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL55-224ENST00000464148 UBA3Q8TBC4 463 aa13.79□□□□□ -0.2
MRPL55-224ENST00000464148 SEMA4DQ92854 862 aa13.79□□□□□ -0.2
MRPL55-224ENST00000464148 NAF1Q96HR8 494 aaKnown RBP13.79□□□□□ -0.2
MRPL55-224ENST00000464148 FAXDC2Q96IV6 333 aa13.79□□□□□ -0.2
MRPL55-224ENST00000464148 MRGPRX3Q96LB0 322 aa13.79□□□□□ -0.2
MRPL55-224ENST00000464148 TPX2Q9ULW0 747 aaKnown RBP13.79□□□□□ -0.2
MRPL55-224ENST00000464148 ERVW-1Q9UQF0 538 aa13.79□□□□□ -0.2
MRPL55-224ENST00000464148 EDDM13A0A1B0GTR0 161 aa13.78□□□□□ -0.2
MRPL55-224ENST00000464148 ACSL4O60488 711 aa13.78□□□□□ -0.2
MRPL55-224ENST00000464148 MAGEC1O60732 1142 aa13.78□□□□□ -0.2
MRPL55-224ENST00000464148 ADH1BP00325 375 aa13.78□□□□□ -0.2
MRPL55-224ENST00000464148 IL1BP01584 269 aa13.78□□□□□ -0.2
MRPL55-224ENST00000464148 SRPRAP08240 638 aaKnown RBP13.78□□□□□ -0.2
MRPL55-224ENST00000464148 CD19P15391 556 aa13.78□□□□□ -0.2
MRPL55-224ENST00000464148 C5AR1P21730 350 aa13.78□□□□□ -0.2
MRPL55-224ENST00000464148 RPL13P26373 211 aaKnown RBP13.78□□□□□ -0.2
MRPL55-224ENST00000464148 GTF2H1P32780 548 aa13.78□□□□□ -0.2
MRPL55-224ENST00000464148 ADPRHP54922 357 aa13.78□□□□□ -0.2
MRPL55-224ENST00000464148 INSM1Q01101 510 aaPredicted RBP13.78□□□□□ -0.2
MRPL55-224ENST00000464148 ENPEPQ07075 957 aa13.78□□□□□ -0.2
MRPL55-224ENST00000464148 ARID5BQ14865 1188 aa13.78□□□□□ -0.2
MRPL55-224ENST00000464148 FAM133BQ5BKY9 247 aaKnown RBP13.78□□□□□ -0.2
MRPL55-224ENST00000464148 NAPEPLDQ6IQ20 393 aa13.78□□□□□ -0.2
MRPL55-224ENST00000464148 PCSK4Q6UW60 755 aa13.78□□□□□ -0.2
MRPL55-224ENST00000464148 PRPF39Q86UA1 669 aaKnown RBP13.78□□□□□ -0.2
MRPL55-224ENST00000464148 CACTIN-AS1Q8N1I8 211 aa13.78□□□□□ -0.2
MRPL55-224ENST00000464148 AADATQ8N5Z0 425 aa13.78□□□□□ -0.2
MRPL55-224ENST00000464148 DCBLD1Q8N8Z6 715 aa13.78□□□□□ -0.2
MRPL55-224ENST00000464148 MFSD2AQ8NA29 543 aa13.78□□□□□ -0.2
MRPL55-224ENST00000464148 KDM1BQ8NB78 822 aa13.78□□□□□ -0.2
MRPL55-224ENST00000464148 ZNF248Q8NDW4 579 aa13.78□□□□□ -0.2
MRPL55-224ENST00000464148 FBXL13Q8NEE6 735 aa13.78□□□□□ -0.2
MRPL55-224ENST00000464148 RFFLQ8WZ73 363 aa13.78□□□□□ -0.2
MRPL55-224ENST00000464148 DDX50Q9BQ39 737 aaKnown RBP13.78□□□□□ -0.2
MRPL55-224ENST00000464148 RAB20Q9NX57 234 aa13.78□□□□□ -0.2
MRPL55-224ENST00000464148 INTS6Q9UL03 887 aaKnown RBP13.78□□□□□ -0.2
MRPL55-224ENST00000464148 ACTN4O43707 911 aaKnown RBP13.77□□□□□ -0.21
MRPL55-224ENST00000464148 SDC3O75056 442 aa13.77□□□□□ -0.21
MRPL55-224ENST00000464148 MOCS3O95396 460 aa13.77□□□□□ -0.21
MRPL55-224ENST00000464148 MT-CO3P00414 261 aa13.77□□□□□ -0.21
MRPL55-224ENST00000464148 ACP1P24666 158 aa13.77□□□□□ -0.21
MRPL55-224ENST00000464148 CTSOP43234 321 aaPredicted RBP13.77□□□□□ -0.21
MRPL55-224ENST00000464148 MXI1P50539 228 aa13.77□□□□□ -0.21
MRPL55-224ENST00000464148 TBX4P57082 545 aa13.77□□□□□ -0.21
MRPL55-224ENST00000464148 PCBP4P57723 403 aaKnown RBP13.77□□□□□ -0.21
MRPL55-224ENST00000464148 TMPRSS3P57727 454 aa13.77□□□□□ -0.21
MRPL55-224ENST00000464148 DAOAP59103 153 aa13.77□□□□□ -0.21
MRPL55-224ENST00000464148 RPS24P62847 133 aaKnown RBP13.77□□□□□ -0.21
MRPL55-224ENST00000464148 DAB2P98082 770 aa13.77□□□□□ -0.21
MRPL55-224ENST00000464148 ECT2LQ008S8 904 aa13.77□□□□□ -0.21
MRPL55-224ENST00000464148 E2F1Q01094 437 aa13.77□□□□□ -0.21
MRPL55-224ENST00000464148 ADAM9Q13443 819 aa13.77□□□□□ -0.21
MRPL55-224ENST00000464148 HS1BP3Q53T59 392 aa13.77□□□□□ -0.21
MRPL55-224ENST00000464148 PITRM1Q5JRX3 1037 aa13.77□□□□□ -0.21
MRPL55-224ENST00000464148 MSANTD2Q6P1R3 559 aa13.77□□□□□ -0.21
MRPL55-224ENST00000464148 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP13.77□□□□□ -0.21
MRPL55-224ENST00000464148 MMS22LQ6ZRQ5 1243 aa13.77□□□□□ -0.21
MRPL55-224ENST00000464148 SPATS2Q86XZ4 545 aaKnown RBP13.77□□□□□ -0.21
MRPL55-224ENST00000464148 STK40Q8N2I9 435 aa13.77□□□□□ -0.21
MRPL55-224ENST00000464148 PIAS4Q8N2W9 510 aaPredicted RBP13.77□□□□□ -0.21
MRPL55-224ENST00000464148 KCTD13Q8WZ19 329 aa13.77□□□□□ -0.21
MRPL55-224ENST00000464148 CCDC47Q96A33 483 aaKnown RBP13.77□□□□□ -0.21
MRPL55-224ENST00000464148 LMLNQ96KR4 655 aa13.77□□□□□ -0.21
MRPL55-224ENST00000464148 PRICKLE1Q96MT3 831 aaPredicted RBP13.77□□□□□ -0.21
MRPL55-224ENST00000464148 FAM129BQ96TA1 746 aa13.77□□□□□ -0.21
MRPL55-224ENST00000464148 CNGB3Q9NQW8 809 aa13.77□□□□□ -0.21
MRPL55-224ENST00000464148 MAPK8IP1Q9UQF2 711 aa13.77□□□□□ -0.21
MRPL55-224ENST00000464148 PIK3R2O00459 728 aa13.76□□□□□ -0.21
MRPL55-224ENST00000464148 SIGLEC6O43699 453 aa13.76□□□□□ -0.21
MRPL55-224ENST00000464148 STX10O60499 249 aa13.76□□□□□ -0.21
MRPL55-224ENST00000464148 IGLV3-27P01718 113 aa13.76□□□□□ -0.21
MRPL55-224ENST00000464148 HSP90AA1P07900 732 aaKnown RBP13.76□□□□□ -0.21
MRPL55-224ENST00000464148 SETSIPP0DME0 302 aa13.76□□□□□ -0.21
MRPL55-224ENST00000464148 MAT2AP31153 395 aaKnown RBP13.76□□□□□ -0.21
MRPL55-224ENST00000464148 UCNP55089 124 aa13.76□□□□□ -0.21
MRPL55-224ENST00000464148 PPP2CBP62714 309 aa13.76□□□□□ -0.21
MRPL55-224ENST00000464148 PPP2CAP67775 309 aa13.76□□□□□ -0.21
MRPL55-224ENST00000464148 RHDQ02161 417 aa13.76□□□□□ -0.21
MRPL55-224ENST00000464148 STAT4Q14765 748 aa13.76□□□□□ -0.21
MRPL55-224ENST00000464148 NFIL3Q16649 462 aa13.76□□□□□ -0.21
MRPL55-224ENST00000464148 PROX2Q3B8N5 592 aa13.76□□□□□ -0.21
MRPL55-224ENST00000464148 FSCBQ5H9T9 825 aa13.76□□□□□ -0.21
MRPL55-224ENST00000464148 ARHGAP40Q5TG30 622 aa13.76□□□□□ -0.21
MRPL55-224ENST00000464148 NADSYN1Q6IA69 706 aa13.76□□□□□ -0.21
MRPL55-224ENST00000464148 KANSL1Q7Z3B3 1105 aa13.76□□□□□ -0.21
MRPL55-224ENST00000464148 CFAP52Q8N1V2 620 aa13.76□□□□□ -0.21
MRPL55-224ENST00000464148 AZIN2Q96A70 460 aa13.76□□□□□ -0.21
MRPL55-224ENST00000464148 RPL10LQ96L21 214 aaKnown RBP13.76□□□□□ -0.21
MRPL55-224ENST00000464148 CPNE5Q9HCH3 593 aa13.76□□□□□ -0.21
MRPL55-224ENST00000464148 SLCO3A1Q9UIG8 710 aa13.76□□□□□ -0.21
MRPL55-224ENST00000464148 ITIH6Q6UXX5 1313 aa13.75□□□□□ -0.21
MRPL55-224ENST00000464148 LATO43561 262 aa13.75□□□□□ -0.21
MRPL55-224ENST00000464148 MYL1P05976 194 aa13.75□□□□□ -0.21
MRPL55-224ENST00000464148 MZF1P28698 734 aaPredicted RBP13.75□□□□□ -0.21
MRPL55-224ENST00000464148 NNMTP40261 264 aa13.75□□□□□ -0.21
MRPL55-224ENST00000464148 RGS7P49802 495 aa13.75□□□□□ -0.21
MRPL55-224ENST00000464148 YWHAEP62258 255 aaKnown RBP13.75□□□□□ -0.21
MRPL55-224ENST00000464148 OVGP1Q12889 678 aa13.75□□□□□ -0.21
MRPL55-224ENST00000464148 ZNF211Q13398 564 aaPredicted RBP13.75□□□□□ -0.21
MRPL55-224ENST00000464148 IQCHQ86VS3 1027 aa13.75□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms