RNA–Protein interactions for RNA: ENST00000464001.1

ITGB1-208, Transcript of integrin subunit beta 1, humanhuman

TSL 2

Gene ITGB1, Length 316 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB1-208ENST00000464001 FAM50BQ9Y247 325 aa4.66□□□□□ -1.66
ITGB1-208ENST00000464001 TCF20Q9UGU0 1960 aaKnown RBP4.65□□□□□ -1.66
ITGB1-208ENST00000464001 LMTK3Q96Q04 1460 aa4.65□□□□□ -1.66
ITGB1-208ENST00000464001 FAM234BA2RU67 622 aa4.65□□□□□ -1.67
ITGB1-208ENST00000464001 FOXO6A8MYZ6 492 aa4.65□□□□□ -1.67
ITGB1-208ENST00000464001 ACOT8O14734 319 aa4.65□□□□□ -1.67
ITGB1-208ENST00000464001 KAT7O95251 611 aa4.65□□□□□ -1.67
ITGB1-208ENST00000464001 KLKB1P03952 638 aa4.65□□□□□ -1.67
ITGB1-208ENST00000464001 SLC5A1P13866 664 aa4.65□□□□□ -1.67
ITGB1-208ENST00000464001 PTMSP20962 102 aa4.65□□□□□ -1.67
ITGB1-208ENST00000464001 RFX2P48378 723 aa4.65□□□□□ -1.67
ITGB1-208ENST00000464001 EGR4Q05215 589 aa4.65□□□□□ -1.67
ITGB1-208ENST00000464001 LTBQ06643 244 aa4.65□□□□□ -1.67
ITGB1-208ENST00000464001 COBLL1Q53SF7 1204 aa4.65□□□□□ -1.67
ITGB1-208ENST00000464001 ASPHD1Q5U4P2 390 aa4.65□□□□□ -1.67
ITGB1-208ENST00000464001 HIBCHQ6NVY1 386 aaPredicted RBP4.65□□□□□ -1.67
ITGB1-208ENST00000464001 PARM1Q6UWI2 310 aa4.65□□□□□ -1.67
ITGB1-208ENST00000464001 SPATA2LQ8IUW3 424 aaPredicted RBP4.65□□□□□ -1.67
ITGB1-208ENST00000464001 SVIPQ8NHG7 77 aa4.65□□□□□ -1.67
ITGB1-208ENST00000464001 NUDCD2Q8WVJ2 157 aa4.65□□□□□ -1.67
ITGB1-208ENST00000464001 INPP5DQ92835 1189 aa4.65□□□□□ -1.67
ITGB1-208ENST00000464001 NEUROG1Q92886 237 aa4.65□□□□□ -1.67
ITGB1-208ENST00000464001 MED30Q96HR3 178 aa4.65□□□□□ -1.67
ITGB1-208ENST00000464001 FAM84BQ96KN1 310 aaPredicted RBP4.65□□□□□ -1.67
ITGB1-208ENST00000464001 NAP1L4Q99733 375 aaKnown RBP4.65□□□□□ -1.67
ITGB1-208ENST00000464001 LDHAL6BQ9BYZ2 381 aaPredicted RBP4.65□□□□□ -1.67
ITGB1-208ENST00000464001 ZNF700Q9H0M5 742 aa4.65□□□□□ -1.67
ITGB1-208ENST00000464001 PPCSQ9HAB8 311 aa4.65□□□□□ -1.67
ITGB1-208ENST00000464001 SPAG4Q9NPE6 437 aa4.65□□□□□ -1.67
ITGB1-208ENST00000464001 SIRT3Q9NTG7 399 aaPredicted RBP4.65□□□□□ -1.67
ITGB1-208ENST00000464001 MTPAPQ9NVV4 582 aaKnown RBP eCLIP4.65□□□□□ -1.67
ITGB1-208ENST00000464001 SWAP70Q9UH65 585 aa4.65□□□□□ -1.67
ITGB1-208ENST00000464001 TNFSF13BQ9Y275 285 aa4.65□□□□□ -1.67
ITGB1-208ENST00000464001 DTNAQ9Y4J8 743 aa4.65□□□□□ -1.67
ITGB1-208ENST00000464001 NKX2-8O15522 239 aa4.64□□□□□ -1.67
ITGB1-208ENST00000464001 TAF5LO75529 589 aa4.64□□□□□ -1.67
ITGB1-208ENST00000464001 HOXC6P09630 235 aa4.64□□□□□ -1.67
ITGB1-208ENST00000464001 FGF3P11487 239 aaPredicted RBP4.64□□□□□ -1.67
ITGB1-208ENST00000464001 HARSP12081 509 aaKnown RBP4.64□□□□□ -1.67
ITGB1-208ENST00000464001 PLA2G2AP14555 144 aa4.64□□□□□ -1.67
ITGB1-208ENST00000464001 ENTPD1P49961 510 aa4.64□□□□□ -1.67
ITGB1-208ENST00000464001 SAFBQ15424 915 aaKnown RBP eCLIP4.64□□□□□ -1.67
ITGB1-208ENST00000464001 Q5PR19 223 aa4.64□□□□□ -1.67
ITGB1-208ENST00000464001 C10orf76Q5T2E6 689 aa4.64□□□□□ -1.67
ITGB1-208ENST00000464001 ARL6IP4Q66PJ3 421 aaKnown RBP4.64□□□□□ -1.67
ITGB1-208ENST00000464001 TMEM88Q6PEY1 159 aa4.64□□□□□ -1.67
ITGB1-208ENST00000464001 DPP9Q86TI2 863 aa4.64□□□□□ -1.67
ITGB1-208ENST00000464001 PPM1EQ8WY54 764 aa4.64□□□□□ -1.67
ITGB1-208ENST00000464001 ZNF566Q969W8 418 aa4.64□□□□□ -1.67
ITGB1-208ENST00000464001 NECTIN3Q9NQS3 549 aa4.64□□□□□ -1.67
ITGB1-208ENST00000464001 FSCN3Q9NQT6 498 aa4.64□□□□□ -1.67
ITGB1-208ENST00000464001 NRBP1Q9UHY1 535 aa4.64□□□□□ -1.67
ITGB1-208ENST00000464001 C3orf70A6NLC5 250 aaPredicted RBP4.63□□□□□ -1.67
ITGB1-208ENST00000464001 HNRNPDLO14979 420 aaKnown RBP4.63□□□□□ -1.67
ITGB1-208ENST00000464001 ZNF500O60304 480 aaPredicted RBP4.63□□□□□ -1.67
ITGB1-208ENST00000464001 NTSR2O95665 410 aa4.63□□□□□ -1.67
ITGB1-208ENST00000464001 GLP2RO95838 553 aa4.63□□□□□ -1.67
ITGB1-208ENST00000464001 ALDOAP04075 364 aaKnown RBP4.63□□□□□ -1.67
ITGB1-208ENST00000464001 LCKP06239 509 aa4.63□□□□□ -1.67
ITGB1-208ENST00000464001 HOXA11P31270 313 aaPredicted RBP4.63□□□□□ -1.67
ITGB1-208ENST00000464001 ROR2Q01974 943 aaKnown RBP4.63□□□□□ -1.67
ITGB1-208ENST00000464001 POU5F1BQ06416 359 aa4.63□□□□□ -1.67
ITGB1-208ENST00000464001 HYAL1Q12794 435 aa4.63□□□□□ -1.67
ITGB1-208ENST00000464001 PMS2P11Q13670 270 aa4.63□□□□□ -1.67
ITGB1-208ENST00000464001 HLTFQ14527 1009 aaKnown RBP eCLIP4.63□□□□□ -1.67
ITGB1-208ENST00000464001 NFATC4Q14934 902 aa4.63□□□□□ -1.67
ITGB1-208ENST00000464001 AAK1Q2M2I8 961 aa4.63□□□□□ -1.67
ITGB1-208ENST00000464001 SLC4A8Q2Y0W8 1093 aa4.63□□□□□ -1.67
ITGB1-208ENST00000464001 INO80DQ53TQ3 878 aaPredicted RBP4.63□□□□□ -1.67
ITGB1-208ENST00000464001 FAM209BQ5JX69 171 aa4.63□□□□□ -1.67
ITGB1-208ENST00000464001 ANKRD40Q6AI12 368 aa4.63□□□□□ -1.67
ITGB1-208ENST00000464001 Q6ZTC4 211 aa4.63□□□□□ -1.67
ITGB1-208ENST00000464001 C7orf57Q8NEG2 295 aa4.63□□□□□ -1.67
ITGB1-208ENST00000464001 ELP5Q8TE02 316 aa4.63□□□□□ -1.67
ITGB1-208ENST00000464001 SARGQ9BW04 601 aa4.63□□□□□ -1.67
ITGB1-208ENST00000464001 PCGF6Q9BYE7 350 aa4.63□□□□□ -1.67
ITGB1-208ENST00000464001 MAP6D1Q9H9H5 199 aa4.63□□□□□ -1.67
ITGB1-208ENST00000464001 PTPRHQ9HD43 1115 aa4.63□□□□□ -1.67
ITGB1-208ENST00000464001 TBC1D14Q9P2M4 693 aa4.63□□□□□ -1.67
ITGB1-208ENST00000464001 TAGLN3Q9UI15 199 aa4.63□□□□□ -1.67
ITGB1-208ENST00000464001 MYO6Q9UM54 1294 aa4.63□□□□□ -1.67
ITGB1-208ENST00000464001 CEP83Q9Y592 693 aa4.63□□□□□ -1.67
ITGB1-208ENST00000464001 INSL5Q9Y5Q6 135 aa4.63□□□□□ -1.67
ITGB1-208ENST00000464001 CCER2I3L3R5 266 aa4.62□□□□□ -1.67
ITGB1-208ENST00000464001 PODXLO00592 558 aa4.62□□□□□ -1.67
ITGB1-208ENST00000464001 FGF18O76093 207 aa4.62□□□□□ -1.67
ITGB1-208ENST00000464001 ALDOCP09972 364 aaKnown RBP4.62□□□□□ -1.67
ITGB1-208ENST00000464001 CPA1P15085 419 aa4.62□□□□□ -1.67
ITGB1-208ENST00000464001 MT3P25713 68 aa4.62□□□□□ -1.67
ITGB1-208ENST00000464001 EEF1GP26641 437 aaKnown RBP4.62□□□□□ -1.67
ITGB1-208ENST00000464001 RASSF2P50749 326 aa4.62□□□□□ -1.67
ITGB1-208ENST00000464001 SHC2P98077 582 aa4.62□□□□□ -1.67
ITGB1-208ENST00000464001 TLE3Q04726 772 aa4.62□□□□□ -1.67
ITGB1-208ENST00000464001 PMPCAQ10713 525 aa4.62□□□□□ -1.67
ITGB1-208ENST00000464001 GALNT3Q14435 633 aa4.62□□□□□ -1.67
ITGB1-208ENST00000464001 ERAP2Q6P179 960 aa4.62□□□□□ -1.67
ITGB1-208ENST00000464001 TRILQ7L0X0 811 aa4.62□□□□□ -1.67
ITGB1-208ENST00000464001 PCGF5Q86SE9 256 aa4.62□□□□□ -1.67
ITGB1-208ENST00000464001 ADGRF3Q8IZF5 1079 aa4.62□□□□□ -1.67
ITGB1-208ENST00000464001 CNPY4Q8N129 248 aa4.62□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms