RNA–Protein interactions for RNA: ENST00000463477.5

PTPRD-207, Transcript of protein tyrosine phosphatase, receptor type D, humanhuman

TSL 1 (best) BASIC

Gene PTPRD, Length 1,697 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRD-207ENST00000463477 ZWINTO95229 277 aa10.21□□□□□ -0.78
PTPRD-207ENST00000463477 SEC24AO95486 1093 aa10.21□□□□□ -0.78
PTPRD-207ENST00000463477 GSTA2P09210 222 aa10.21□□□□□ -0.78
PTPRD-207ENST00000463477 ZFXP17010 805 aaPredicted RBP10.21□□□□□ -0.78
PTPRD-207ENST00000463477 IL4RP24394 825 aa10.21□□□□□ -0.78
PTPRD-207ENST00000463477 ACADSBP45954 432 aa10.21□□□□□ -0.78
PTPRD-207ENST00000463477 BCAT1P54687 386 aa10.21□□□□□ -0.78
PTPRD-207ENST00000463477 PPARDQ03181 441 aa10.21□□□□□ -0.78
PTPRD-207ENST00000463477 TAF5Q15542 800 aa10.21□□□□□ -0.78
PTPRD-207ENST00000463477 PDK4Q16654 411 aa10.21□□□□□ -0.78
PTPRD-207ENST00000463477 SPRED3Q2MJR0 410 aa10.21□□□□□ -0.78
PTPRD-207ENST00000463477 FNBP1LQ5T0N5 605 aa10.21□□□□□ -0.78
PTPRD-207ENST00000463477 ANKRD22Q5VYY1 191 aa10.21□□□□□ -0.78
PTPRD-207ENST00000463477 PMF1Q6P1K2 205 aa10.21□□□□□ -0.78
PTPRD-207ENST00000463477 SLC26A9Q7LBE3 791 aa10.21□□□□□ -0.78
PTPRD-207ENST00000463477 OTOP3Q7RTS5 596 aa10.21□□□□□ -0.78
PTPRD-207ENST00000463477 OR10T2Q8NGX3 314 aa10.21□□□□□ -0.78
PTPRD-207ENST00000463477 MGARPQ8TDB4 240 aa10.21□□□□□ -0.78
PTPRD-207ENST00000463477 MRPL45Q9BRJ2 306 aaKnown RBP10.21□□□□□ -0.78
PTPRD-207ENST00000463477 ZCWPW1Q9H0M4 648 aa10.21□□□□□ -0.78
PTPRD-207ENST00000463477 USP29Q9HBJ7 922 aa10.21□□□□□ -0.78
PTPRD-207ENST00000463477 PCDH18Q9HCL0 1135 aa10.21□□□□□ -0.78
PTPRD-207ENST00000463477 SLC40A1Q9NP59 571 aa10.21□□□□□ -0.78
PTPRD-207ENST00000463477 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP10.21□□□□□ -0.78
PTPRD-207ENST00000463477 SAE1Q9UBE0 346 aaPredicted RBP10.21□□□□□ -0.78
PTPRD-207ENST00000463477 XPO7Q9UIA9 1087 aaKnown RBP10.21□□□□□ -0.78
PTPRD-207ENST00000463477 PLXNA3P51805 1871 aa10.21□□□□□ -0.78
PTPRD-207ENST00000463477 POC1B-GALNT4F8VUJ3 575 aa10.2□□□□□ -0.78
PTPRD-207ENST00000463477 PRRG1O14668 218 aa10.2□□□□□ -0.78
PTPRD-207ENST00000463477 APOL1O14791 398 aa10.2□□□□□ -0.78
PTPRD-207ENST00000463477 TM9SF1O15321 606 aa10.2□□□□□ -0.78
PTPRD-207ENST00000463477 VNN2O95498 520 aa10.2□□□□□ -0.78
PTPRD-207ENST00000463477 OR4Q2P0C623 313 aa10.2□□□□□ -0.78
PTPRD-207ENST00000463477 KRT15P19012 456 aa10.2□□□□□ -0.78
PTPRD-207ENST00000463477 SKIV2L2P42285 1042 aaKnown RBP10.2□□□□□ -0.78
PTPRD-207ENST00000463477 NR2C2P49116 596 aa10.2□□□□□ -0.78
PTPRD-207ENST00000463477 BST2Q10589 180 aaKnown RBP10.2□□□□□ -0.78
PTPRD-207ENST00000463477 DUSP4Q13115 394 aa10.2□□□□□ -0.78
PTPRD-207ENST00000463477 KRT81Q14533 505 aa10.2□□□□□ -0.78
PTPRD-207ENST00000463477 DPYSL2Q16555 572 aa10.2□□□□□ -0.78
PTPRD-207ENST00000463477 C15orf59Q2T9L4 293 aaPredicted RBP10.2□□□□□ -0.78
PTPRD-207ENST00000463477 MSS51Q4VC12 460 aa10.2□□□□□ -0.78
PTPRD-207ENST00000463477 SPDYAQ5MJ70 313 aa10.2□□□□□ -0.78
PTPRD-207ENST00000463477 FBXW10Q5XX13 1052 aa10.2□□□□□ -0.78
PTPRD-207ENST00000463477 DARS2Q6PI48 645 aaKnown RBP10.2□□□□□ -0.78
PTPRD-207ENST00000463477 LRRTM3Q86VH5 581 aa10.2□□□□□ -0.78
PTPRD-207ENST00000463477 RNF135Q8IUD6 432 aa10.2□□□□□ -0.78
PTPRD-207ENST00000463477 DCP1BQ8IZD4 617 aaKnown RBP10.2□□□□□ -0.78
PTPRD-207ENST00000463477 PLD5Q8N7P1 536 aa10.2□□□□□ -0.78
PTPRD-207ENST00000463477 FAM71DQ8N9W8 422 aa10.2□□□□□ -0.78
PTPRD-207ENST00000463477 ANKRD52Q8NB46 1076 aa10.2□□□□□ -0.78
PTPRD-207ENST00000463477 FBXO36Q8NEA4 188 aa10.2□□□□□ -0.78
PTPRD-207ENST00000463477 TRAF3IP1Q8TDR0 691 aaPredicted RBP10.2□□□□□ -0.78
PTPRD-207ENST00000463477 MZB1Q8WU39 189 aa10.2□□□□□ -0.78
PTPRD-207ENST00000463477 C2orf15Q8WU43 125 aaKnown RBP10.2□□□□□ -0.78
PTPRD-207ENST00000463477 FAM172AQ8WUF8 416 aa10.2□□□□□ -0.78
PTPRD-207ENST00000463477 LRRC39Q96DD0 335 aa10.2□□□□□ -0.78
PTPRD-207ENST00000463477 HSFY1Q96LI6 401 aa10.2□□□□□ -0.78
PTPRD-207ENST00000463477 TMEM209Q96SK2 561 aa10.2□□□□□ -0.78
PTPRD-207ENST00000463477 CYTH2Q99418 400 aa10.2□□□□□ -0.78
PTPRD-207ENST00000463477 WDR83Q9BRX9 315 aaKnown RBP10.2□□□□□ -0.78
PTPRD-207ENST00000463477 KLC4Q9NSK0 619 aa10.2□□□□□ -0.78
PTPRD-207ENST00000463477 INSL5Q9Y5Q6 135 aa10.2□□□□□ -0.78
PTPRD-207ENST00000463477 TEX264Q9Y6I9 313 aa10.2□□□□□ -0.78
PTPRD-207ENST00000463477 MTMR11A4FU01 709 aa10.19□□□□□ -0.78
PTPRD-207ENST00000463477 C2CD4DB7Z1M9 353 aa10.19□□□□□ -0.78
PTPRD-207ENST00000463477 CCL16O15467 120 aa10.19□□□□□ -0.78
PTPRD-207ENST00000463477 PAPSS1O43252 624 aaPredicted RBP10.19□□□□□ -0.78
PTPRD-207ENST00000463477 ZNF189O75820 626 aaPredicted RBP10.19□□□□□ -0.78
PTPRD-207ENST00000463477 LRG1P02750 347 aa10.19□□□□□ -0.78
PTPRD-207ENST00000463477 ALADP13716 330 aa10.19□□□□□ -0.78
PTPRD-207ENST00000463477 PTPN2P17706 415 aa10.19□□□□□ -0.78
PTPRD-207ENST00000463477 FOXN2P32314 431 aa10.19□□□□□ -0.78
PTPRD-207ENST00000463477 TUFMP49411 452 aaKnown RBP10.19□□□□□ -0.78
PTPRD-207ENST00000463477 MMRN1Q13201 1228 aa10.19□□□□□ -0.78
PTPRD-207ENST00000463477 C3orf62Q6ZUJ4 267 aa10.19□□□□□ -0.78
PTPRD-207ENST00000463477 STRADAQ7RTN6 431 aa10.19□□□□□ -0.78
PTPRD-207ENST00000463477 GRASPQ7Z6J2 395 aaPredicted RBP10.19□□□□□ -0.78
PTPRD-207ENST00000463477 ACOT1Q86TX2 421 aa10.19□□□□□ -0.78
PTPRD-207ENST00000463477 PSTKQ8IV42 348 aaKnown RBP10.19□□□□□ -0.78
PTPRD-207ENST00000463477 CDKL3Q8IVW4 592 aaPredicted RBP10.19□□□□□ -0.78
PTPRD-207ENST00000463477 PALM2Q8IXS6 379 aa10.19□□□□□ -0.78
PTPRD-207ENST00000463477 ADGRF2Q8IZF7 708 aa10.19□□□□□ -0.78
PTPRD-207ENST00000463477 FUKQ8N0W3 1084 aa10.19□□□□□ -0.78
PTPRD-207ENST00000463477 PQLC3Q8N755 202 aa10.19□□□□□ -0.78
PTPRD-207ENST00000463477 C12orf29Q8N999 325 aa10.19□□□□□ -0.78
PTPRD-207ENST00000463477 ATAD1Q8NBU5 361 aa10.19□□□□□ -0.78
PTPRD-207ENST00000463477 MCUQ8NE86 351 aa10.19□□□□□ -0.78
PTPRD-207ENST00000463477 GDAP1Q8TB36 358 aa10.19□□□□□ -0.78
PTPRD-207ENST00000463477 MAGEC3Q8TD91 643 aa10.19□□□□□ -0.78
PTPRD-207ENST00000463477 DCAKDQ8WVC6 231 aa10.19□□□□□ -0.78
PTPRD-207ENST00000463477 PIWIL1Q96J94 861 aaKnown RBP10.19□□□□□ -0.78
PTPRD-207ENST00000463477 PAFAH2Q99487 392 aa10.19□□□□□ -0.78
PTPRD-207ENST00000463477 SNRNP25Q9BV90 132 aaKnown RBP10.19□□□□□ -0.78
PTPRD-207ENST00000463477 PITPNM3Q9BZ71 974 aa10.19□□□□□ -0.78
PTPRD-207ENST00000463477 DDX43Q9NXZ2 648 aaKnown RBP10.19□□□□□ -0.78
PTPRD-207ENST00000463477 RCOR3Q9P2K3 495 aaPredicted RBP10.19□□□□□ -0.78
PTPRD-207ENST00000463477 DNMT3BQ9UBC3 853 aaKnown RBP10.19□□□□□ -0.78
PTPRD-207ENST00000463477 NME7Q9Y5B8 376 aa10.19□□□□□ -0.78
PTPRD-207ENST00000463477 ZNF638Q14966 1978 aaKnown RBP10.19□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 13 ms