RNA–Protein interactions for RNA: ENST00000463455.1

RTCB-202, Transcript of RNA 2',3'-cyclic phosphate and 5'-OH ligase, humanhuman

TSL 2

Gene RTCB, Length 628 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTCB-202ENST00000463455 CDKAL1Q5VV42 579 aa12.3□□□□□ -0.44
RTCB-202ENST00000463455 ZNF776Q68DI1 518 aaPredicted RBP12.3□□□□□ -0.44
RTCB-202ENST00000463455 FAM183BPQ6ZVS7 135 aa12.3□□□□□ -0.44
RTCB-202ENST00000463455 USP30Q70CQ3 517 aa12.3□□□□□ -0.44
RTCB-202ENST00000463455 ARCQ7LC44 396 aa12.3□□□□□ -0.44
RTCB-202ENST00000463455 ZNF677Q86XU0 584 aa12.3□□□□□ -0.44
RTCB-202ENST00000463455 PASD1Q8IV76 773 aa12.3□□□□□ -0.44
RTCB-202ENST00000463455 LGI2Q8N0V4 545 aa12.3□□□□□ -0.44
RTCB-202ENST00000463455 DEFB106AQ8N104 65 aa12.3□□□□□ -0.44
RTCB-202ENST00000463455 CYB5D2Q8WUJ1 264 aa12.3□□□□□ -0.44
RTCB-202ENST00000463455 PGAP3Q96FM1 320 aaPredicted RBP12.3□□□□□ -0.44
RTCB-202ENST00000463455 PRMT1Q99873 361 aaKnown RBP12.3□□□□□ -0.44
RTCB-202ENST00000463455 SLC6A17Q9H1V8 727 aa12.3□□□□□ -0.44
RTCB-202ENST00000463455 SYNCQ9H7C4 482 aa12.3□□□□□ -0.44
RTCB-202ENST00000463455 FAM204AQ9H8W3 233 aa12.3□□□□□ -0.44
RTCB-202ENST00000463455 SGK2Q9HBY8 427 aa12.3□□□□□ -0.44
RTCB-202ENST00000463455 PRSS16Q9NQE7 514 aa12.3□□□□□ -0.44
RTCB-202ENST00000463455 SAMSN1Q9NSI8 373 aaKnown RBP12.3□□□□□ -0.44
RTCB-202ENST00000463455 DDIT4Q9NX09 232 aa12.3□□□□□ -0.44
RTCB-202ENST00000463455 STIM2Q9P246 746 aa12.3□□□□□ -0.44
RTCB-202ENST00000463455 AJAP1Q9UKB5 411 aaPredicted RBP12.3□□□□□ -0.44
RTCB-202ENST00000463455 TPX2Q9ULW0 747 aaKnown RBP12.3□□□□□ -0.44
RTCB-202ENST00000463455 STAP1Q9ULZ2 295 aa12.3□□□□□ -0.44
RTCB-202ENST00000463455 A0A1B0GTW7 788 aa12.29□□□□□ -0.44
RTCB-202ENST00000463455 MEI4A8MW99 385 aa12.29□□□□□ -0.44
RTCB-202ENST00000463455 F8VZ95 297 aa12.29□□□□□ -0.44
RTCB-202ENST00000463455 PES1O00541 588 aaKnown RBP12.29□□□□□ -0.44
RTCB-202ENST00000463455 RNASEH1O60930 286 aaKnown RBP12.29□□□□□ -0.44
RTCB-202ENST00000463455 F9P00740 461 aa12.29□□□□□ -0.44
RTCB-202ENST00000463455 DNTTP04053 509 aa12.29□□□□□ -0.44
RTCB-202ENST00000463455 ERBB2P04626 1255 aa12.29□□□□□ -0.44
RTCB-202ENST00000463455 HLA-EP13747 358 aa12.29□□□□□ -0.44
RTCB-202ENST00000463455 CSKP41240 450 aa12.29□□□□□ -0.44
RTCB-202ENST00000463455 NOVA1P51513 510 aaKnown RBP12.29□□□□□ -0.44
RTCB-202ENST00000463455 PLK1P53350 603 aa12.29□□□□□ -0.44
RTCB-202ENST00000463455 RAPGEF1Q13905 1077 aa12.29□□□□□ -0.44
RTCB-202ENST00000463455 HNRNPDQ14103 355 aaKnown RBP12.29□□□□□ -0.44
RTCB-202ENST00000463455 TAF5Q15542 800 aa12.29□□□□□ -0.44
RTCB-202ENST00000463455 PLEKHG6Q3KR16 790 aa12.29□□□□□ -0.44
RTCB-202ENST00000463455 PITRM1Q5JRX3 1037 aa12.29□□□□□ -0.44
RTCB-202ENST00000463455 OR6B2Q6IFH4 312 aa12.29□□□□□ -0.44
RTCB-202ENST00000463455 RGL4Q8IZJ4 473 aa12.29□□□□□ -0.44
RTCB-202ENST00000463455 CARNMT1Q8N4J0 409 aa12.29□□□□□ -0.44
RTCB-202ENST00000463455 HDDC3Q8N4P3 179 aa12.29□□□□□ -0.44
RTCB-202ENST00000463455 NT5C3BQ969T7 300 aa12.29□□□□□ -0.44
RTCB-202ENST00000463455 C18orf8Q96DM3 657 aa12.29□□□□□ -0.44
RTCB-202ENST00000463455 MYO19Q96H55 970 aa12.29□□□□□ -0.44
RTCB-202ENST00000463455 GPR174Q9BXC1 333 aa12.29□□□□□ -0.44
RTCB-202ENST00000463455 RSPH9Q9H1X1 276 aaPredicted RBP12.29□□□□□ -0.44
RTCB-202ENST00000463455 PDCL3Q9H2J4 239 aa12.29□□□□□ -0.44
RTCB-202ENST00000463455 SLC32A1Q9H598 525 aa12.29□□□□□ -0.44
RTCB-202ENST00000463455 OSGEPQ9NPF4 335 aa12.29□□□□□ -0.44
RTCB-202ENST00000463455 CD93Q9NPY3 652 aa12.29□□□□□ -0.44
RTCB-202ENST00000463455 DNAAF2Q9NVR5 837 aaKnown RBP12.29□□□□□ -0.44
RTCB-202ENST00000463455 ANO10Q9NW15 660 aa12.29□□□□□ -0.44
RTCB-202ENST00000463455 INTS6Q9UL03 887 aaKnown RBP12.29□□□□□ -0.44
RTCB-202ENST00000463455 FHOD1Q9Y613 1164 aa12.29□□□□□ -0.44
RTCB-202ENST00000463455 LAMA1P25391 3075 aa12.29□□□□□ -0.44
RTCB-202ENST00000463455 EPG5Q9HCE0 2579 aa12.29□□□□□ -0.44
RTCB-202ENST00000463455 ATXN2Q99700 1313 aaKnown RBP12.29□□□□□ -0.44
RTCB-202ENST00000463455 PCNX2A6NKB5 2137 aa12.28□□□□□ -0.44
RTCB-202ENST00000463455 EDDM13A0A1B0GTR0 161 aa12.28□□□□□ -0.44
RTCB-202ENST00000463455 OPHN1O60890 802 aa12.28□□□□□ -0.44
RTCB-202ENST00000463455 MBD3O95983 291 aa12.28□□□□□ -0.44
RTCB-202ENST00000463455 NNMTP40261 264 aa12.28□□□□□ -0.44
RTCB-202ENST00000463455 RPS14P62263 151 aaKnown RBP12.28□□□□□ -0.44
RTCB-202ENST00000463455 PITX1P78337 314 aaPredicted RBP12.28□□□□□ -0.44
RTCB-202ENST00000463455 ECT2LQ008S8 904 aa12.28□□□□□ -0.44
RTCB-202ENST00000463455 SEMA3BQ13214 749 aa12.28□□□□□ -0.44
RTCB-202ENST00000463455 C5orf22Q49AR2 442 aa12.28□□□□□ -0.44
RTCB-202ENST00000463455 FKBP15Q5T1M5 1219 aa12.28□□□□□ -0.44
RTCB-202ENST00000463455 N4BP2L1Q5TBK1 243 aaPredicted RBP12.28□□□□□ -0.44
RTCB-202ENST00000463455 SH3PXD2AQ5TCZ1 1133 aa12.28□□□□□ -0.44
RTCB-202ENST00000463455 RNF219Q5W0B1 726 aaPredicted RBP12.28□□□□□ -0.44
RTCB-202ENST00000463455 RAP1GAP2Q684P5 730 aa12.28□□□□□ -0.44
RTCB-202ENST00000463455 PSAPL1Q6NUJ1 521 aa12.28□□□□□ -0.44
RTCB-202ENST00000463455 IL27RAQ6UWB1 636 aa12.28□□□□□ -0.44
RTCB-202ENST00000463455 PIP4P1Q86T03 277 aa12.28□□□□□ -0.44
RTCB-202ENST00000463455 ANKRD20A12PQ8NF67 263 aa12.28□□□□□ -0.44
RTCB-202ENST00000463455 EPS8L1Q8TE68 723 aa12.28□□□□□ -0.44
RTCB-202ENST00000463455 RNF34Q969K3 372 aa12.28□□□□□ -0.44
RTCB-202ENST00000463455 MYEOVQ96EZ4 313 aa12.28□□□□□ -0.44
RTCB-202ENST00000463455 MRGPRX3Q96LB0 322 aa12.28□□□□□ -0.44
RTCB-202ENST00000463455 NPY6RQ99463 290 aa12.28□□□□□ -0.44
RTCB-202ENST00000463455 BTBD1Q9H0C5 482 aa12.28□□□□□ -0.44
RTCB-202ENST00000463455 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP12.28□□□□□ -0.44
RTCB-202ENST00000463455 XPO7Q9UIA9 1087 aaKnown RBP12.28□□□□□ -0.44
RTCB-202ENST00000463455 ANGPTL2Q9UKU9 493 aa12.28□□□□□ -0.44
RTCB-202ENST00000463455 CHD8Q9HCK8 2581 aa12.27□□□□□ -0.44
RTCB-202ENST00000463455 CLDN11O75508 207 aa12.27□□□□□ -0.45
RTCB-202ENST00000463455 ZNF883P0CG24 379 aa12.27□□□□□ -0.45
RTCB-202ENST00000463455 PNMA6AP0CW24 399 aaPredicted RBP12.27□□□□□ -0.45
RTCB-202ENST00000463455 MAPK8P45983 427 aa12.27□□□□□ -0.45
RTCB-202ENST00000463455 ELAVL3Q14576 367 aaKnown RBP12.27□□□□□ -0.45
RTCB-202ENST00000463455 KRT31Q15323 416 aa12.27□□□□□ -0.45
RTCB-202ENST00000463455 STX1AQ16623 288 aa12.27□□□□□ -0.45
RTCB-202ENST00000463455 SLC25A52Q3SY17 297 aa12.27□□□□□ -0.45
RTCB-202ENST00000463455 HSP90AA4PQ58FG1 418 aa12.27□□□□□ -0.45
RTCB-202ENST00000463455 FSCBQ5H9T9 825 aa12.27□□□□□ -0.45
RTCB-202ENST00000463455 DCAF12L1Q5VU92 463 aa12.27□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms