RNA–Protein interactions for RNA: ENST00000463184.1

VARS-221, Transcript of valyl-tRNA synthetase, humanhuman

TSL 2

Gene VARS, Length 619 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS-221ENST00000463184 OMDQ99983 421 aa20.49■□□□□ 0.87
VARS-221ENST00000463184 MIS12Q9H081 205 aa20.49■□□□□ 0.87
VARS-221ENST00000463184 SERGEFQ9UGK8 458 aa20.49■□□□□ 0.87
VARS-221ENST00000463184 PCDHGA1Q9Y5H4 931 aa20.49■□□□□ 0.87
VARS-221ENST00000463184 LOC400499M0QZD8 3231 aa20.49■□□□□ 0.87
VARS-221ENST00000463184 FAM149AA5PLN7 773 aa20.48■□□□□ 0.87
VARS-221ENST00000463184 SART1O43290 800 aaKnown RBP20.48■□□□□ 0.87
VARS-221ENST00000463184 RNASEH2AO75792 299 aaKnown RBP20.48■□□□□ 0.87
VARS-221ENST00000463184 LUC7L3O95232 432 aaKnown RBP20.48■□□□□ 0.87
VARS-221ENST00000463184 FYNP06241 537 aa20.48■□□□□ 0.87
VARS-221ENST00000463184 BRD2P25440 801 aaKnown RBP20.48■□□□□ 0.87
VARS-221ENST00000463184 CCDC157Q569K6 752 aa20.48■□□□□ 0.87
VARS-221ENST00000463184 DHRS13Q6UX07 377 aa20.48■□□□□ 0.87
VARS-221ENST00000463184 SCUBE3Q8IX30 993 aa20.48■□□□□ 0.87
VARS-221ENST00000463184 SPATA20Q8TB22 786 aa20.48■□□□□ 0.87
VARS-221ENST00000463184 MYEOVQ96EZ4 313 aa20.48■□□□□ 0.87
VARS-221ENST00000463184 NUCKS1Q9H1E3 243 aaKnown RBP20.48■□□□□ 0.87
VARS-221ENST00000463184 TPX2Q9ULW0 747 aaKnown RBP20.48■□□□□ 0.87
VARS-221ENST00000463184 EDDM13A0A1B0GTR0 161 aa20.47■□□□□ 0.87
VARS-221ENST00000463184 TTC34A8MYJ7 566 aa20.47■□□□□ 0.87
VARS-221ENST00000463184 YKT6O15498 198 aa20.47■□□□□ 0.87
VARS-221ENST00000463184 CDK4P11802 303 aa20.47■□□□□ 0.87
VARS-221ENST00000463184 CD38P28907 300 aa20.47■□□□□ 0.87
VARS-221ENST00000463184 SLC8A1P32418 973 aa20.47■□□□□ 0.87
VARS-221ENST00000463184 RPL34P49207 117 aaKnown RBP20.47■□□□□ 0.87
VARS-221ENST00000463184 CCR5P51681 352 aa20.47■□□□□ 0.87
VARS-221ENST00000463184 ECT2LQ008S8 904 aa20.47■□□□□ 0.87
VARS-221ENST00000463184 DCAF6Q58WW2 860 aa20.47■□□□□ 0.87
VARS-221ENST00000463184 FSCBQ5H9T9 825 aa20.47■□□□□ 0.87
VARS-221ENST00000463184 SND1Q7KZF4 910 aaKnown RBP eCLIP20.47■□□□□ 0.87
VARS-221ENST00000463184 BEND5Q7L4P6 421 aa20.47■□□□□ 0.87
VARS-221ENST00000463184 SMARCE1Q969G3 411 aa20.47■□□□□ 0.87
VARS-221ENST00000463184 LRIG1Q96JA1 1093 aa20.47■□□□□ 0.87
VARS-221ENST00000463184 CEP63Q96MT8 703 aa20.47■□□□□ 0.87
VARS-221ENST00000463184 EBF2Q9HAK2 575 aa20.47■□□□□ 0.87
VARS-221ENST00000463184 NAALADL1Q9UQQ1 740 aa20.47■□□□□ 0.87
VARS-221ENST00000463184 ITIH6Q6UXX5 1313 aa20.47■□□□□ 0.87
VARS-221ENST00000463184 A0A087WV48 116 aa20.46■□□□□ 0.87
VARS-221ENST00000463184 C10orf142B7Z368 130 aa20.46■□□□□ 0.87
VARS-221ENST00000463184 PSMA7O14818 248 aa20.46■□□□□ 0.87
VARS-221ENST00000463184 P4HA2O15460 535 aa20.46■□□□□ 0.87
VARS-221ENST00000463184 WNT1P04628 370 aa20.46■□□□□ 0.87
VARS-221ENST00000463184 ITGAVP06756 1048 aa20.46■□□□□ 0.87
VARS-221ENST00000463184 C1SP09871 688 aa20.46■□□□□ 0.87
VARS-221ENST00000463184 GOT1P17174 413 aa20.46■□□□□ 0.87
VARS-221ENST00000463184 ABCB4P21439 1286 aa20.46■□□□□ 0.87
VARS-221ENST00000463184 ACADSBP45954 432 aa20.46■□□□□ 0.87
VARS-221ENST00000463184 STIM1Q13586 685 aa20.46■□□□□ 0.87
VARS-221ENST00000463184 PRAMEF14Q5SWL7 426 aa20.46■□□□□ 0.87
VARS-221ENST00000463184 RNF219Q5W0B1 726 aaPredicted RBP20.46■□□□□ 0.87
VARS-221ENST00000463184 MMS22LQ6ZRQ5 1243 aa20.46■□□□□ 0.87
VARS-221ENST00000463184 GATAD2AQ86YP4 633 aa20.46■□□□□ 0.87
VARS-221ENST00000463184 CFAP52Q8N1V2 620 aa20.46■□□□□ 0.87
VARS-221ENST00000463184 LMO3Q8TAP4 145 aa20.46■□□□□ 0.87
VARS-221ENST00000463184 KAT5Q92993 513 aa20.46■□□□□ 0.87
VARS-221ENST00000463184 FAM149B1Q96BN6 582 aa20.46■□□□□ 0.87
VARS-221ENST00000463184 DHTKD1Q96HY7 919 aaPredicted RBP20.46■□□□□ 0.87
VARS-221ENST00000463184 FAM129BQ96TA1 746 aa20.46■□□□□ 0.87
VARS-221ENST00000463184 TRIM62Q9BVG3 475 aa20.46■□□□□ 0.87
VARS-221ENST00000463184 AASDHPPTQ9NRN7 309 aa20.46■□□□□ 0.87
VARS-221ENST00000463184 CEP83Q9Y592 693 aa20.46■□□□□ 0.87
VARS-221ENST00000463184 KNTC1P50748 2209 aa20.46■□□□□ 0.87
VARS-221ENST00000463184 ENC1O14682 589 aa20.45■□□□□ 0.86
VARS-221ENST00000463184 LDOC1O95751 146 aaPredicted RBP20.45■□□□□ 0.86
VARS-221ENST00000463184 MOCS2O96007 188 aaPredicted RBP20.45■□□□□ 0.86
VARS-221ENST00000463184 ADH1BP00325 375 aa20.45■□□□□ 0.86
VARS-221ENST00000463184 C5AR1P21730 350 aa20.45■□□□□ 0.86
VARS-221ENST00000463184 CTSOP43234 321 aaPredicted RBP20.45■□□□□ 0.86
VARS-221ENST00000463184 GPD2P43304 727 aa20.45■□□□□ 0.86
VARS-221ENST00000463184 GCNT1Q02742 428 aa20.45■□□□□ 0.86
VARS-221ENST00000463184 KCNJ12Q14500 433 aa20.45■□□□□ 0.86
VARS-221ENST00000463184 CCDC40Q4G0X9 1142 aa20.45■□□□□ 0.86
VARS-221ENST00000463184 SLC45A4Q5BKX6 768 aa20.45■□□□□ 0.86
VARS-221ENST00000463184 LGI2Q8N0V4 545 aa20.45■□□□□ 0.86
VARS-221ENST00000463184 SAP25Q8TEE9 199 aa20.45■□□□□ 0.86
VARS-221ENST00000463184 CNDP2Q96KP4 475 aaKnown RBP20.45■□□□□ 0.86
VARS-221ENST00000463184 GDF3Q9NR23 364 aa20.45■□□□□ 0.86
VARS-221ENST00000463184 ST7Q9NRC1 585 aa20.45■□□□□ 0.86
VARS-221ENST00000463184 SLCO3A1Q9UIG8 710 aa20.45■□□□□ 0.86
VARS-221ENST00000463184 COL5A1P20908 1838 aaPredicted RBP20.44■□□□□ 0.86
VARS-221ENST00000463184 PLXNA2O75051 1894 aa20.44■□□□□ 0.86
VARS-221ENST00000463184 A0A1W2PR77 199 aa20.44■□□□□ 0.86
VARS-221ENST00000463184 CAPN9O14815 690 aa20.44■□□□□ 0.86
VARS-221ENST00000463184 CALCAP01258 141 aa20.44■□□□□ 0.86
VARS-221ENST00000463184 APOEP02649 317 aa20.44■□□□□ 0.86
VARS-221ENST00000463184 NNMTP40261 264 aa20.44■□□□□ 0.86
VARS-221ENST00000463184 PSMD8P48556 350 aa20.44■□□□□ 0.86
VARS-221ENST00000463184 ARRB1P49407 418 aaPredicted RBP20.44■□□□□ 0.86
VARS-221ENST00000463184 SLC12A1Q13621 1099 aa20.44■□□□□ 0.86
VARS-221ENST00000463184 SHBQ15464 509 aa20.44■□□□□ 0.86
VARS-221ENST00000463184 RRAGAQ7L523 313 aa20.44■□□□□ 0.86
VARS-221ENST00000463184 TAC4Q86UU9 113 aa20.44■□□□□ 0.86
VARS-221ENST00000463184 STK40Q8N2I9 435 aa20.44■□□□□ 0.86
VARS-221ENST00000463184 AADATQ8N5Z0 425 aa20.44■□□□□ 0.86
VARS-221ENST00000463184 OR14C36Q8NHC7 312 aa20.44■□□□□ 0.86
VARS-221ENST00000463184 ADAM32Q8TC27 787 aa20.44■□□□□ 0.86
VARS-221ENST00000463184 PTPRN2Q92932 1015 aa20.44■□□□□ 0.86
VARS-221ENST00000463184 TJP2Q9UDY2 1190 aa20.44■□□□□ 0.86
VARS-221ENST00000463184 XPO7Q9UIA9 1087 aaKnown RBP20.44■□□□□ 0.86
VARS-221ENST00000463184 RFPL3O75679 317 aa20.43■□□□□ 0.86
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms