RNA–Protein interactions for RNA: ENST00000463060.5

COL6A1-202, Transcript of collagen type VI alpha 1 chain, humanhuman

TSL 5

Gene COL6A1, Length 863 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A1-202ENST00000463060 CHST9Q7L1S5 443 aa14.76□□□□□ -0.05
COL6A1-202ENST00000463060 ADAT2Q7Z6V5 191 aaKnown RBP14.76□□□□□ -0.05
COL6A1-202ENST00000463060 CIR1Q86X95 450 aaPredicted RBP14.76□□□□□ -0.05
COL6A1-202ENST00000463060 ARHGAP12Q8IWW6 846 aa14.76□□□□□ -0.05
COL6A1-202ENST00000463060 LZTR1Q8N653 840 aa14.76□□□□□ -0.05
COL6A1-202ENST00000463060 TDRD5Q8NAT2 981 aaKnown RBP14.76□□□□□ -0.05
COL6A1-202ENST00000463060 ST13P5Q8NFI4 369 aaPredicted RBP14.76□□□□□ -0.05
COL6A1-202ENST00000463060 MAFAQ8NHW3 353 aaPredicted RBP14.76□□□□□ -0.05
COL6A1-202ENST00000463060 IRF7Q92985 503 aa14.76□□□□□ -0.05
COL6A1-202ENST00000463060 SPHK2Q9NRA0 654 aa14.76□□□□□ -0.05
COL6A1-202ENST00000463060 DTLQ9NZJ0 730 aa14.76□□□□□ -0.05
COL6A1-202ENST00000463060 MARK1Q9P0L2 795 aa14.76□□□□□ -0.05
COL6A1-202ENST00000463060 TBC1D30Q9Y2I9 924 aa14.76□□□□□ -0.05
COL6A1-202ENST00000463060 A0A1B0GVM2 712 aa14.75□□□□□ -0.05
COL6A1-202ENST00000463060 TCAF2A6NFQ2 919 aa14.75□□□□□ -0.05
COL6A1-202ENST00000463060 C2CD4DB7Z1M9 353 aa14.75□□□□□ -0.05
COL6A1-202ENST00000463060 PECAM1P16284 738 aaPredicted RBP14.75□□□□□ -0.05
COL6A1-202ENST00000463060 HOXD9P28356 352 aaPredicted RBP14.75□□□□□ -0.05
COL6A1-202ENST00000463060 MAPKAPK2P49137 400 aa14.75□□□□□ -0.05
COL6A1-202ENST00000463060 DYNLT1P63172 113 aa14.75□□□□□ -0.05
COL6A1-202ENST00000463060 NOMO1Q15155 1222 aa14.75□□□□□ -0.05
COL6A1-202ENST00000463060 CCNG2Q16589 344 aa14.75□□□□□ -0.05
COL6A1-202ENST00000463060 PUS10Q3MIT2 529 aaKnown RBP14.75□□□□□ -0.05
COL6A1-202ENST00000463060 CXorf57Q6NSI4 855 aaKnown RBP14.75□□□□□ -0.05
COL6A1-202ENST00000463060 DRICH1Q6PGQ1 229 aaPredicted RBP14.75□□□□□ -0.05
COL6A1-202ENST00000463060 TMCO3Q6UWJ1 677 aa14.75□□□□□ -0.05
COL6A1-202ENST00000463060 TP53INP2Q8IXH6 220 aa14.75□□□□□ -0.05
COL6A1-202ENST00000463060 C12orf50Q8NA57 414 aaPredicted RBP14.75□□□□□ -0.05
COL6A1-202ENST00000463060 TTC13Q8NBP0 860 aa14.75□□□□□ -0.05
COL6A1-202ENST00000463060 HJURPQ8NCD3 748 aaPredicted RBP14.75□□□□□ -0.05
COL6A1-202ENST00000463060 TTC16Q8NEE8 873 aa14.75□□□□□ -0.05
COL6A1-202ENST00000463060 SPATA4Q8NEY3 305 aa14.75□□□□□ -0.05
COL6A1-202ENST00000463060 OR52K2Q8NGK3 314 aa14.75□□□□□ -0.05
COL6A1-202ENST00000463060 SLC35B2Q8TB61 432 aa14.75□□□□□ -0.05
COL6A1-202ENST00000463060 ACTL9Q8TC94 416 aa14.75□□□□□ -0.05
COL6A1-202ENST00000463060 DEPDC1BQ8WUY9 529 aa14.75□□□□□ -0.05
COL6A1-202ENST00000463060 LMLNQ96KR4 655 aa14.75□□□□□ -0.05
COL6A1-202ENST00000463060 OLFM3Q96PB7 478 aa14.75□□□□□ -0.05
COL6A1-202ENST00000463060 KXD1Q9BQD3 176 aa14.75□□□□□ -0.05
COL6A1-202ENST00000463060 AP1M1Q9BXS5 423 aa14.75□□□□□ -0.05
COL6A1-202ENST00000463060 LRRC19Q9H756 370 aa14.75□□□□□ -0.05
COL6A1-202ENST00000463060 PRDM6Q9NQX0 595 aa14.75□□□□□ -0.05
COL6A1-202ENST00000463060 DUS2Q9NX74 493 aaKnown RBP14.75□□□□□ -0.05
COL6A1-202ENST00000463060 FBXO10Q9UK96 956 aa14.75□□□□□ -0.05
COL6A1-202ENST00000463060 NUP205Q92621 2012 aa14.75□□□□□ -0.05
COL6A1-202ENST00000463060 CHD5Q8TDI0 1954 aa14.74□□□□□ -0.05
COL6A1-202ENST00000463060 MYOFQ9NZM1 2061 aa14.74□□□□□ -0.05
COL6A1-202ENST00000463060 ARNTLO00327 626 aa14.74□□□□□ -0.05
COL6A1-202ENST00000463060 KRIT1O00522 736 aa14.74□□□□□ -0.05
COL6A1-202ENST00000463060 CHADO15335 359 aa14.74□□□□□ -0.05
COL6A1-202ENST00000463060 MFSD11O43934 449 aa14.74□□□□□ -0.05
COL6A1-202ENST00000463060 TBL1XO60907 577 aa14.74□□□□□ -0.05
COL6A1-202ENST00000463060 PSMC3P17980 439 aa14.74□□□□□ -0.05
COL6A1-202ENST00000463060 NDST2P52849 883 aa14.74□□□□□ -0.05
COL6A1-202ENST00000463060 OTUD4Q01804 1114 aaKnown RBP14.74□□□□□ -0.05
COL6A1-202ENST00000463060 PDGFRLQ15198 375 aa14.74□□□□□ -0.05
COL6A1-202ENST00000463060 DHCR24Q15392 516 aa14.74□□□□□ -0.05
COL6A1-202ENST00000463060 GAB4Q2WGN9 574 aa14.74□□□□□ -0.05
COL6A1-202ENST00000463060 LY6G5CQ5SRR4 150 aa14.74□□□□□ -0.05
COL6A1-202ENST00000463060 CCDC181Q5TID7 509 aa14.74□□□□□ -0.05
COL6A1-202ENST00000463060 PTCRAQ6ISU1 281 aaPredicted RBP14.74□□□□□ -0.05
COL6A1-202ENST00000463060 C1orf228Q6PIY5 440 aa14.74□□□□□ -0.05
COL6A1-202ENST00000463060 PLCD3Q8N3E9 789 aa14.74□□□□□ -0.05
COL6A1-202ENST00000463060 TRAF3IP1Q8TDR0 691 aaPredicted RBP14.74□□□□□ -0.05
COL6A1-202ENST00000463060 P3H4Q92791 437 aa14.74□□□□□ -0.05
COL6A1-202ENST00000463060 NKD2Q969F2 451 aaPredicted RBP14.74□□□□□ -0.05
COL6A1-202ENST00000463060 NXPE3Q969Y0 559 aa14.74□□□□□ -0.05
COL6A1-202ENST00000463060 FRMD8P1Q9BZ68 369 aaPredicted RBP14.74□□□□□ -0.05
COL6A1-202ENST00000463060 SLC39A8Q9C0K1 460 aa14.74□□□□□ -0.05
COL6A1-202ENST00000463060 HPS4Q9NQG7 708 aa14.74□□□□□ -0.05
COL6A1-202ENST00000463060 HOMER3Q9NSC5 361 aa14.74□□□□□ -0.05
COL6A1-202ENST00000463060 THG1LQ9NWX6 298 aaKnown RBP14.74□□□□□ -0.05
COL6A1-202ENST00000463060 DONSONQ9NYP3 566 aa14.74□□□□□ -0.05
COL6A1-202ENST00000463060 CLEC4EQ9ULY5 219 aa14.74□□□□□ -0.05
COL6A1-202ENST00000463060 OR51B4Q9Y5P0 310 aa14.74□□□□□ -0.05
COL6A1-202ENST00000463060 RAD54BQ9Y620 910 aa14.74□□□□□ -0.05
COL6A1-202ENST00000463060 NUMBLQ9Y6R0 609 aa14.74□□□□□ -0.05
COL6A1-202ENST00000463060 OTOL1A6NHN0 477 aaPredicted RBP14.73□□□□□ -0.05
COL6A1-202ENST00000463060 HOXC11O43248 304 aaPredicted RBP14.73□□□□□ -0.05
COL6A1-202ENST00000463060 LIASO43766 372 aa14.73□□□□□ -0.05
COL6A1-202ENST00000463060 CYP17A1P05093 508 aa14.73□□□□□ -0.05
COL6A1-202ENST00000463060 ARSAP15289 507 aa14.73□□□□□ -0.05
COL6A1-202ENST00000463060 IFNAR2P48551 515 aa14.73□□□□□ -0.05
COL6A1-202ENST00000463060 YBEYP58557 167 aaPredicted RBP14.73□□□□□ -0.05
COL6A1-202ENST00000463060 TFF2Q03403 129 aa14.73□□□□□ -0.05
COL6A1-202ENST00000463060 CKAP4Q07065 602 aaKnown RBP14.73□□□□□ -0.05
COL6A1-202ENST00000463060 GALNT2Q10471 571 aa14.73□□□□□ -0.05
COL6A1-202ENST00000463060 XRCC4Q13426 336 aa14.73□□□□□ -0.05
COL6A1-202ENST00000463060 OASLQ15646 514 aaKnown RBP14.73□□□□□ -0.05
COL6A1-202ENST00000463060 FSCBQ5H9T9 825 aa14.73□□□□□ -0.05
COL6A1-202ENST00000463060 TRIM68Q6AZZ1 485 aa14.73□□□□□ -0.05
COL6A1-202ENST00000463060 TPGS1Q6ZTW0 290 aa14.73□□□□□ -0.05
COL6A1-202ENST00000463060 TFAP2DQ7Z6R9 452 aa14.73□□□□□ -0.05
COL6A1-202ENST00000463060 SETD3Q86TU7 594 aaPredicted RBP14.73□□□□□ -0.05
COL6A1-202ENST00000463060 FIBINQ8TAL6 211 aa14.73□□□□□ -0.05
COL6A1-202ENST00000463060 WFDC5Q8TCV5 224 aa14.73□□□□□ -0.05
COL6A1-202ENST00000463060 C1orf54Q8WWF1 131 aa14.73□□□□□ -0.05
COL6A1-202ENST00000463060 RSAD2Q8WXG1 361 aa14.73□□□□□ -0.05
COL6A1-202ENST00000463060 ATG4AQ8WYN0 398 aa14.73□□□□□ -0.05
COL6A1-202ENST00000463060 HAUS1Q96CS2 278 aa14.73□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms