RNA–Protein interactions for RNA: ENST00000461660.1

ATP13A3-206, Transcript of ATPase 13A3, humanhuman

TSL 1 (best)

Gene ATP13A3, Length 3,517 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATP13A3-206ENST00000461660 PMPCBO75439 489 aa4.22□□□□□ -1.73
ATP13A3-206ENST00000461660 KRT37O76014 449 aa4.22□□□□□ -1.73
ATP13A3-206ENST00000461660 AGTP01019 485 aa4.22□□□□□ -1.73
ATP13A3-206ENST00000461660 MT-ND3P03897 115 aa4.22□□□□□ -1.73
ATP13A3-206ENST00000461660 CDC25CP30307 473 aa4.22□□□□□ -1.73
ATP13A3-206ENST00000461660 CHKAP35790 457 aa4.22□□□□□ -1.73
ATP13A3-206ENST00000461660 GARSP41250 739 aaKnown RBP4.22□□□□□ -1.73
ATP13A3-206ENST00000461660 GEMP55040 296 aa4.22□□□□□ -1.73
ATP13A3-206ENST00000461660 OXCT1P55809 520 aa4.22□□□□□ -1.73
ATP13A3-206ENST00000461660 ZNF844Q08AG5 666 aa4.22□□□□□ -1.73
ATP13A3-206ENST00000461660 AUHQ13825 339 aaKnown RBP4.22□□□□□ -1.73
ATP13A3-206ENST00000461660 RAB33AQ14088 237 aa4.22□□□□□ -1.73
ATP13A3-206ENST00000461660 POLD3Q15054 466 aaPredicted RBP4.22□□□□□ -1.73
ATP13A3-206ENST00000461660 LONRF1Q17RB8 773 aa4.22□□□□□ -1.73
ATP13A3-206ENST00000461660 PARP6Q2NL67 630 aa4.22□□□□□ -1.73
ATP13A3-206ENST00000461660 AGBL2Q5U5Z8 902 aa4.22□□□□□ -1.73
ATP13A3-206ENST00000461660 MARC1Q5VT66 337 aa4.22□□□□□ -1.73
ATP13A3-206ENST00000461660 NCBP2-AS2Q69YL0 99 aa4.22□□□□□ -1.73
ATP13A3-206ENST00000461660 HIBCHQ6NVY1 386 aaPredicted RBP4.22□□□□□ -1.73
ATP13A3-206ENST00000461660 MSANTD2Q6P1R3 559 aa4.22□□□□□ -1.73
ATP13A3-206ENST00000461660 CD300LGQ6UXG3 332 aa4.22□□□□□ -1.73
ATP13A3-206ENST00000461660 C3orf62Q6ZUJ4 267 aa4.22□□□□□ -1.73
ATP13A3-206ENST00000461660 SCD5Q86SK9 330 aa4.22□□□□□ -1.73
ATP13A3-206ENST00000461660 LINC00523Q86TU6 105 aa4.22□□□□□ -1.73
ATP13A3-206ENST00000461660 DENND1CQ8IV53 801 aa4.22□□□□□ -1.73
ATP13A3-206ENST00000461660 SRRM1Q8IYB3 904 aaKnown RBP4.22□□□□□ -1.73
ATP13A3-206ENST00000461660 RYBPQ8N488 228 aaPredicted RBP4.22□□□□□ -1.73
ATP13A3-206ENST00000461660 PDCD7Q8N8D1 485 aaKnown RBP4.22□□□□□ -1.73
ATP13A3-206ENST00000461660 CCDC63Q8NA47 563 aa4.22□□□□□ -1.73
ATP13A3-206ENST00000461660 KLHL23Q8NBE8 558 aa4.22□□□□□ -1.73
ATP13A3-206ENST00000461660 FBXO36Q8NEA4 188 aa4.22□□□□□ -1.73
ATP13A3-206ENST00000461660 PPP1R14CQ8TAE6 165 aa4.22□□□□□ -1.73
ATP13A3-206ENST00000461660 MGARPQ8TDB4 240 aa4.22□□□□□ -1.73
ATP13A3-206ENST00000461660 LRRN4Q8WUT4 740 aa4.22□□□□□ -1.73
ATP13A3-206ENST00000461660 SEC14L1Q92503 715 aa4.22□□□□□ -1.73
ATP13A3-206ENST00000461660 ARHGEF2Q92974 986 aaKnown RBP4.22□□□□□ -1.73
ATP13A3-206ENST00000461660 IFT43Q96FT9 208 aa4.22□□□□□ -1.73
ATP13A3-206ENST00000461660 ZDHHC18Q9NUE0 388 aa4.22□□□□□ -1.73
ATP13A3-206ENST00000461660 INTS9Q9NV88 658 aaKnown RBP4.22□□□□□ -1.73
ATP13A3-206ENST00000461660 TMEM30AQ9NV96 361 aa4.22□□□□□ -1.73
ATP13A3-206ENST00000461660 MTPAPQ9NVV4 582 aaKnown RBP eCLIP4.22□□□□□ -1.73
ATP13A3-206ENST00000461660 AAR2Q9Y312 384 aaKnown RBP4.22□□□□□ -1.73
ATP13A3-206ENST00000461660 THSD7BQ9C0I4 1608 aa4.22□□□□□ -1.73
ATP13A3-206ENST00000461660 C5orf60A6NFR6 353 aa4.22□□□□□ -1.73
ATP13A3-206ENST00000461660 CCDC85CA6NKD9 419 aa4.22□□□□□ -1.73
ATP13A3-206ENST00000461660 SDR42E2A6NKP2 422 aa4.22□□□□□ -1.73
ATP13A3-206ENST00000461660 ERI2A8K979 691 aaKnown RBP4.22□□□□□ -1.73
ATP13A3-206ENST00000461660 RASA4BC9J798 803 aa4.22□□□□□ -1.73
ATP13A3-206ENST00000461660 TEX28O15482 410 aa4.22□□□□□ -1.73
ATP13A3-206ENST00000461660 RASA4O43374 803 aa4.22□□□□□ -1.73
ATP13A3-206ENST00000461660 ACSL4O60488 711 aa4.22□□□□□ -1.73
ATP13A3-206ENST00000461660 TSPAN3O60637 253 aa4.22□□□□□ -1.73
ATP13A3-206ENST00000461660 KRT38O76015 456 aa4.22□□□□□ -1.73
ATP13A3-206ENST00000461660 ENDOD1O94919 500 aa4.22□□□□□ -1.73
ATP13A3-206ENST00000461660 VIMP08670 466 aaKnown RBP4.22□□□□□ -1.73
ATP13A3-206ENST00000461660 PAMP19021 973 aa4.22□□□□□ -1.73
ATP13A3-206ENST00000461660 PSMB4P28070 264 aa4.22□□□□□ -1.73
ATP13A3-206ENST00000461660 CORO1AP31146 461 aaKnown RBP4.22□□□□□ -1.73
ATP13A3-206ENST00000461660 ELK3P41970 407 aa4.22□□□□□ -1.73
ATP13A3-206ENST00000461660 GYS2P54840 703 aa4.22□□□□□ -1.73
ATP13A3-206ENST00000461660 GDF10P55107 478 aa4.22□□□□□ -1.73
ATP13A3-206ENST00000461660 MLLT6P55198 1093 aaPredicted RBP4.22□□□□□ -1.73
ATP13A3-206ENST00000461660 USP46P62068 366 aa4.22□□□□□ -1.73
ATP13A3-206ENST00000461660 PDE1BQ01064 536 aa4.22□□□□□ -1.73
ATP13A3-206ENST00000461660 PAFAH1B3Q15102 231 aaKnown RBP4.22□□□□□ -1.73
ATP13A3-206ENST00000461660 TAZQ16635 292 aa4.22□□□□□ -1.73
ATP13A3-206ENST00000461660 RNASEH2BQ5TBB1 312 aaKnown RBP4.22□□□□□ -1.73
ATP13A3-206ENST00000461660 CCDC91Q7Z6B0 441 aa4.22□□□□□ -1.73
ATP13A3-206ENST00000461660 ANKS1BQ7Z6G8 1248 aa4.22□□□□□ -1.73
ATP13A3-206ENST00000461660 CPLX4Q7Z7G2 160 aa4.22□□□□□ -1.73
ATP13A3-206ENST00000461660 IQCKQ8N0W5 287 aa4.22□□□□□ -1.73
ATP13A3-206ENST00000461660 RIBC1Q8N443 379 aaPredicted RBP4.22□□□□□ -1.73
ATP13A3-206ENST00000461660 RTL3Q8N8U3 475 aaKnown RBP4.22□□□□□ -1.73
ATP13A3-206ENST00000461660 DDI1Q8WTU0 396 aa4.22□□□□□ -1.73
ATP13A3-206ENST00000461660 OVCA2Q8WZ82 227 aa4.22□□□□□ -1.73
ATP13A3-206ENST00000461660 CPT1BQ92523 772 aa4.22□□□□□ -1.73
ATP13A3-206ENST00000461660 PRCCQ92733 491 aaPredicted RBP4.22□□□□□ -1.73
ATP13A3-206ENST00000461660 ATP2A3Q93084 1043 aa4.22□□□□□ -1.73
ATP13A3-206ENST00000461660 BHMTQ93088 406 aa4.22□□□□□ -1.73
ATP13A3-206ENST00000461660 ARL8AQ96BM9 186 aa4.22□□□□□ -1.73
ATP13A3-206ENST00000461660 PWWP2AQ96N64 755 aa4.22□□□□□ -1.73
ATP13A3-206ENST00000461660 SERPINB12Q96P63 405 aa4.22□□□□□ -1.73
ATP13A3-206ENST00000461660 CCSER2Q9H7U1 834 aa4.22□□□□□ -1.73
ATP13A3-206ENST00000461660 LRRC40Q9H9A6 602 aa4.22□□□□□ -1.73
ATP13A3-206ENST00000461660 NT5MQ9NPB1 228 aa4.22□□□□□ -1.73
ATP13A3-206ENST00000461660 MSRAQ9UJ68 235 aa4.22□□□□□ -1.73
ATP13A3-206ENST00000461660 ADAM21Q9UKJ8 722 aa4.22□□□□□ -1.73
ATP13A3-206ENST00000461660 NDUFAB1O14561 156 aa4.22□□□□□ -1.73
ATP13A3-206ENST00000461660 SCAMP3O14828 347 aaKnown RBP4.22□□□□□ -1.73
ATP13A3-206ENST00000461660 GCATO75600 419 aa4.22□□□□□ -1.73
ATP13A3-206ENST00000461660 KIAA0754O94854 1291 aa4.22□□□□□ -1.73
ATP13A3-206ENST00000461660 NUDT17P0C025 328 aa4.22□□□□□ -1.73
ATP13A3-206ENST00000461660 CTSAP10619 480 aa4.22□□□□□ -1.73
ATP13A3-206ENST00000461660 CCNB1P14635 433 aa4.22□□□□□ -1.73
ATP13A3-206ENST00000461660 BRAFP15056 766 aa4.22□□□□□ -1.73
ATP13A3-206ENST00000461660 TACR2P21452 398 aa4.22□□□□□ -1.73
ATP13A3-206ENST00000461660 CA4P22748 312 aa4.22□□□□□ -1.73
ATP13A3-206ENST00000461660 EPHB1P54762 984 aa4.22□□□□□ -1.73
ATP13A3-206ENST00000461660 SLC12A2P55011 1212 aa4.22□□□□□ -1.73
ATP13A3-206ENST00000461660 PPP2R2AP63151 447 aa4.22□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms