RNA–Protein interactions for RNA: ENST00000461187.5

SMPD4-216, Transcript of sphingomyelin phosphodiesterase 4, humanhuman

TSL 3

Gene SMPD4, Length 659 nt, Biotype retained intron, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD4-216ENST00000461187 SERGEFQ9UGK8 458 aa15.22■□□□□ 0.03
SMPD4-216ENST00000461187 NCKAP1Q9Y2A7 1128 aa15.22■□□□□ 0.03
SMPD4-216ENST00000461187 FASNP49327 2511 aaKnown RBP15.21■□□□□ 0.03
SMPD4-216ENST00000461187 ASXL3Q9C0F0 2248 aa15.21■□□□□ 0.03
SMPD4-216ENST00000461187 ITIH6Q6UXX5 1313 aa15.21■□□□□ 0.03
SMPD4-216ENST00000461187 TTC34A8MYJ7 566 aa15.21■□□□□ 0.03
SMPD4-216ENST00000461187 C10orf142B7Z368 130 aa15.21■□□□□ 0.03
SMPD4-216ENST00000461187 H0Y8X5 98 aa15.21■□□□□ 0.03
SMPD4-216ENST00000461187 BIN1O00499 593 aa15.21■□□□□ 0.03
SMPD4-216ENST00000461187 MID1O15344 667 aa15.21■□□□□ 0.03
SMPD4-216ENST00000461187 PAPSS1O43252 624 aaPredicted RBP15.21■□□□□ 0.03
SMPD4-216ENST00000461187 RNASEH1O60930 286 aaKnown RBP15.21■□□□□ 0.03
SMPD4-216ENST00000461187 GNA14O95837 355 aa15.21■□□□□ 0.03
SMPD4-216ENST00000461187 IGLV3-25P01717 112 aa15.21■□□□□ 0.03
SMPD4-216ENST00000461187 SRPRAP08240 638 aaKnown RBP15.21■□□□□ 0.03
SMPD4-216ENST00000461187 CTSKP43235 329 aa15.21■□□□□ 0.03
SMPD4-216ENST00000461187 GALCP54803 685 aa15.21■□□□□ 0.03
SMPD4-216ENST00000461187 SUZ12Q15022 739 aaKnown RBP15.21■□□□□ 0.03
SMPD4-216ENST00000461187 CST6Q15828 149 aa15.21■□□□□ 0.03
SMPD4-216ENST00000461187 ZC3H12AQ5D1E8 599 aaKnown RBP15.21■□□□□ 0.03
SMPD4-216ENST00000461187 RAP1GAP2Q684P5 730 aa15.21■□□□□ 0.03
SMPD4-216ENST00000461187 TMEM110Q86TL2 294 aa15.21■□□□□ 0.03
SMPD4-216ENST00000461187 APCDD1Q8J025 514 aa15.21■□□□□ 0.03
SMPD4-216ENST00000461187 LGI2Q8N0V4 545 aa15.21■□□□□ 0.03
SMPD4-216ENST00000461187 ZNF606Q8WXB4 792 aa15.21■□□□□ 0.03
SMPD4-216ENST00000461187 SRRTQ9BXP5 876 aaKnown RBP15.21■□□□□ 0.03
SMPD4-216ENST00000461187 NEUROG2Q9H2A3 272 aa15.21■□□□□ 0.03
SMPD4-216ENST00000461187 UBE2TQ9NPD8 197 aaPredicted RBP15.21■□□□□ 0.03
SMPD4-216ENST00000461187 SLCO3A1Q9UIG8 710 aa15.21■□□□□ 0.03
SMPD4-216ENST00000461187 UTP18Q9Y5J1 556 aaKnown RBP eCLIP15.21■□□□□ 0.03
SMPD4-216ENST00000461187 CHD5Q8TDI0 1954 aa15.21■□□□□ 0.03
SMPD4-216ENST00000461187 A0A1W2PP55 124 aa15.2■□□□□ 0.02
SMPD4-216ENST00000461187 A0A1W2PPC4 97 aa15.2■□□□□ 0.02
SMPD4-216ENST00000461187 TARSL2A2RTX5 802 aaKnown RBP15.2■□□□□ 0.02
SMPD4-216ENST00000461187 FAM47DPA6NHR8 397 aa15.2■□□□□ 0.02
SMPD4-216ENST00000461187 E5RJQ4 531 aa15.2■□□□□ 0.02
SMPD4-216ENST00000461187 CAPN9O14815 690 aa15.2■□□□□ 0.02
SMPD4-216ENST00000461187 MED7O43513 233 aa15.2■□□□□ 0.02
SMPD4-216ENST00000461187 PCDHGA12O60330 932 aa15.2■□□□□ 0.02
SMPD4-216ENST00000461187 LETM1O95202 739 aaPredicted RBP15.2■□□□□ 0.02
SMPD4-216ENST00000461187 TRUB2O95900 331 aaKnown RBP15.2■□□□□ 0.02
SMPD4-216ENST00000461187 APOEP02649 317 aa15.2■□□□□ 0.02
SMPD4-216ENST00000461187 TACR2P21452 398 aa15.2■□□□□ 0.02
SMPD4-216ENST00000461187 PITX1P78337 314 aaPredicted RBP15.2■□□□□ 0.02
SMPD4-216ENST00000461187 ECT2LQ008S8 904 aa15.2■□□□□ 0.02
SMPD4-216ENST00000461187 PAK1Q13153 545 aa15.2■□□□□ 0.02
SMPD4-216ENST00000461187 EIF4EBP2Q13542 120 aaPredicted RBP15.2■□□□□ 0.02
SMPD4-216ENST00000461187 BECN1Q14457 450 aa15.2■□□□□ 0.02
SMPD4-216ENST00000461187 NCEH1Q6PIU2 408 aa15.2■□□□□ 0.02
SMPD4-216ENST00000461187 LRSAM1Q6UWE0 723 aa15.2■□□□□ 0.02
SMPD4-216ENST00000461187 TMPRSS7Q7RTY8 843 aa15.2■□□□□ 0.02
SMPD4-216ENST00000461187 MMAAQ8IVH4 418 aaKnown RBP15.2■□□□□ 0.02
SMPD4-216ENST00000461187 CCDC117Q8IWD4 279 aaPredicted RBP15.2■□□□□ 0.02
SMPD4-216ENST00000461187 GANCQ8TET4 914 aa15.2■□□□□ 0.02
SMPD4-216ENST00000461187 BTN2A3PQ96KV6 586 aa15.2■□□□□ 0.02
SMPD4-216ENST00000461187 FAM129BQ96TA1 746 aa15.2■□□□□ 0.02
SMPD4-216ENST00000461187 TRIM62Q9BVG3 475 aa15.2■□□□□ 0.02
SMPD4-216ENST00000461187 THAP9Q9H5L6 903 aa15.2■□□□□ 0.02
SMPD4-216ENST00000461187 EBF2Q9HAK2 575 aa15.2■□□□□ 0.02
SMPD4-216ENST00000461187 POPDC2Q9HBU9 364 aa15.2■□□□□ 0.02
SMPD4-216ENST00000461187 ACP6Q9NPH0 428 aa15.2■□□□□ 0.02
SMPD4-216ENST00000461187 ADAMTS1Q9UHI8 967 aa15.2■□□□□ 0.02
SMPD4-216ENST00000461187 LHX6Q9UPM6 363 aa15.2■□□□□ 0.02
SMPD4-216ENST00000461187 LOC400499M0QZD8 3231 aa15.2■□□□□ 0.02
SMPD4-216ENST00000461187 EDDM13A0A1B0GTR0 161 aa15.19■□□□□ 0.02
SMPD4-216ENST00000461187 VILLO15195 856 aa15.19■□□□□ 0.02
SMPD4-216ENST00000461187 THAP12O43422 761 aa15.19■□□□□ 0.02
SMPD4-216ENST00000461187 MOCS3O95396 460 aa15.19■□□□□ 0.02
SMPD4-216ENST00000461187 HOXB3P14651 431 aaPredicted RBP15.19■□□□□ 0.02
SMPD4-216ENST00000461187 GNA15P30679 374 aa15.19■□□□□ 0.02
SMPD4-216ENST00000461187 SLC8A1P32418 973 aa15.19■□□□□ 0.02
SMPD4-216ENST00000461187 CCT8P50990 548 aa15.19■□□□□ 0.02
SMPD4-216ENST00000461187 YWHAZP63104 245 aaKnown RBP15.19■□□□□ 0.02
SMPD4-216ENST00000461187 RACK1P63244 317 aaKnown RBP15.19■□□□□ 0.02
SMPD4-216ENST00000461187 SFSWAPQ12872 951 aaKnown RBP15.19■□□□□ 0.02
SMPD4-216ENST00000461187 KCNJ12Q14500 433 aa15.19■□□□□ 0.02
SMPD4-216ENST00000461187 TAF5Q15542 800 aa15.19■□□□□ 0.02
SMPD4-216ENST00000461187 ADAT2Q7Z6V5 191 aaKnown RBP15.19■□□□□ 0.02
SMPD4-216ENST00000461187 CHSY1Q86X52 802 aa15.19■□□□□ 0.02
SMPD4-216ENST00000461187 OR2T34Q8NGX1 318 aa15.19■□□□□ 0.02
SMPD4-216ENST00000461187 PTPRN2Q92932 1015 aa15.19■□□□□ 0.02
SMPD4-216ENST00000461187 RPL10LQ96L21 214 aaKnown RBP15.19■□□□□ 0.02
SMPD4-216ENST00000461187 SLC6A18Q96N87 628 aa15.19■□□□□ 0.02
SMPD4-216ENST00000461187 MED15Q96RN5 788 aa15.19■□□□□ 0.02
SMPD4-216ENST00000461187 PRMT1Q99873 361 aaKnown RBP15.19■□□□□ 0.02
SMPD4-216ENST00000461187 CCDC86Q9H6F5 360 aaKnown RBP15.19■□□□□ 0.02
SMPD4-216ENST00000461187 TJP2Q9UDY2 1190 aa15.19■□□□□ 0.02
SMPD4-216ENST00000461187 FZD4Q9ULV1 537 aa15.19■□□□□ 0.02
SMPD4-216ENST00000461187 GOLGA8CPA6NN73 597 aa15.18■□□□□ 0.02
SMPD4-216ENST00000461187 BECN2A8MW95 431 aa15.18■□□□□ 0.02
SMPD4-216ENST00000461187 KCNU1A8MYU2 1149 aa15.18■□□□□ 0.02
SMPD4-216ENST00000461187 TNFSF14O43557 240 aa15.18■□□□□ 0.02
SMPD4-216ENST00000461187 DFNA5O60443 496 aa15.18■□□□□ 0.02
SMPD4-216ENST00000461187 GADD45BO75293 160 aaPredicted RBP15.18■□□□□ 0.02
SMPD4-216ENST00000461187 RNASEH2AO75792 299 aaKnown RBP15.18■□□□□ 0.02
SMPD4-216ENST00000461187 WNT1P04628 370 aa15.18■□□□□ 0.02
SMPD4-216ENST00000461187 GRK6P43250 576 aa15.18■□□□□ 0.02
SMPD4-216ENST00000461187 STK19P49842 368 aaPredicted RBP15.18■□□□□ 0.02
SMPD4-216ENST00000461187 IL9RQ01113 521 aa15.18■□□□□ 0.02
SMPD4-216ENST00000461187 PDCLQ13371 301 aa15.18■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms