RNA–Protein interactions for RNA: ENST00000460601.5

NELFCD-201, Transcript of negative elongation factor complex member C/D, humanhuman

TSL 1 (best)

Gene NELFCD, Length 2,137 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NELFCD-201ENST00000460601 GAD2Q05329 585 aa17.3■□□□□ 0.36
NELFCD-201ENST00000460601 MTM1Q13496 603 aa17.3■□□□□ 0.36
NELFCD-201ENST00000460601 PRKD1Q15139 912 aaPredicted RBP17.3■□□□□ 0.36
NELFCD-201ENST00000460601 TEAD2Q15562 447 aa17.3■□□□□ 0.36
NELFCD-201ENST00000460601 MAP9Q49MG5 647 aa17.3■□□□□ 0.36
NELFCD-201ENST00000460601 HEATR6Q6AI08 1181 aaKnown RBP17.3■□□□□ 0.36
NELFCD-201ENST00000460601 TMC5Q6UXY8 1006 aa17.3■□□□□ 0.36
NELFCD-201ENST00000460601 LGI2Q8N0V4 545 aa17.3■□□□□ 0.36
NELFCD-201ENST00000460601 RTL3Q8N8U3 475 aaKnown RBP17.3■□□□□ 0.36
NELFCD-201ENST00000460601 PLD4Q96BZ4 506 aa17.3■□□□□ 0.36
NELFCD-201ENST00000460601 ZNF707Q96C28 371 aaPredicted RBP17.3■□□□□ 0.36
NELFCD-201ENST00000460601 P2RY11Q96G91 374 aa17.3■□□□□ 0.36
NELFCD-201ENST00000460601 FMO2Q99518 471 aa17.3■□□□□ 0.36
NELFCD-201ENST00000460601 FUT8Q9BYC5 575 aa17.3■□□□□ 0.36
NELFCD-201ENST00000460601 IGFLR1Q9H665 355 aa17.3■□□□□ 0.36
NELFCD-201ENST00000460601 DOCK4Q8N1I0 1966 aa17.3■□□□□ 0.36
NELFCD-201ENST00000460601 IGLV3-10A0A075B6K4 115 aa17.3■□□□□ 0.36
NELFCD-201ENST00000460601 TCRBV7S3A2A0A539 114 aa17.3■□□□□ 0.36
NELFCD-201ENST00000460601 GREM1O60565 184 aa17.3■□□□□ 0.36
NELFCD-201ENST00000460601 CDC25CP30307 473 aa17.3■□□□□ 0.36
NELFCD-201ENST00000460601 STIP1P31948 543 aaKnown RBP17.3■□□□□ 0.36
NELFCD-201ENST00000460601 CHKAP35790 457 aa17.3■□□□□ 0.36
NELFCD-201ENST00000460601 ZNF135P52742 658 aaPredicted RBP17.3■□□□□ 0.36
NELFCD-201ENST00000460601 RPS24P62847 133 aaKnown RBP17.3■□□□□ 0.36
NELFCD-201ENST00000460601 CALCOCO2Q13137 446 aa17.3■□□□□ 0.36
NELFCD-201ENST00000460601 XRCC4Q13426 336 aa17.3■□□□□ 0.36
NELFCD-201ENST00000460601 UBAP2Q5T6F2 1119 aaKnown RBP17.3■□□□□ 0.36
NELFCD-201ENST00000460601 PDE12Q6L8Q7 609 aaKnown RBP17.3■□□□□ 0.36
NELFCD-201ENST00000460601 LRRC31Q6UY01 552 aa17.3■□□□□ 0.36
NELFCD-201ENST00000460601 CHRDL2Q6WN34 429 aa17.3■□□□□ 0.36
NELFCD-201ENST00000460601 PDZD4Q76G19 769 aaPredicted RBP17.3■□□□□ 0.36
NELFCD-201ENST00000460601 CDKL3Q8IVW4 592 aaPredicted RBP17.3■□□□□ 0.36
NELFCD-201ENST00000460601 TSEN2Q8NCE0 465 aaKnown RBP17.3■□□□□ 0.36
NELFCD-201ENST00000460601 HTR3CQ8WXA8 447 aa17.3■□□□□ 0.36
NELFCD-201ENST00000460601 TIFAQ96CG3 184 aa17.3■□□□□ 0.36
NELFCD-201ENST00000460601 APOL5Q9BWW9 433 aa17.3■□□□□ 0.36
NELFCD-201ENST00000460601 ZYG11BQ9C0D3 744 aa17.3■□□□□ 0.36
NELFCD-201ENST00000460601 SLC39A8Q9C0K1 460 aa17.3■□□□□ 0.36
NELFCD-201ENST00000460601 NOL6Q9H6R4 1146 aaKnown RBP17.3■□□□□ 0.36
NELFCD-201ENST00000460601 CATSPERBQ9H7T0 1116 aa17.3■□□□□ 0.36
NELFCD-201ENST00000460601 WHRNQ9P202 907 aa17.3■□□□□ 0.36
NELFCD-201ENST00000460601 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP17.29■□□□□ 0.36
NELFCD-201ENST00000460601 GOLGA8MH3BSY2 632 aa17.29■□□□□ 0.36
NELFCD-201ENST00000460601 FGF10O15520 208 aaPredicted RBP17.29■□□□□ 0.36
NELFCD-201ENST00000460601 TSPAN3O60637 253 aa17.29■□□□□ 0.36
NELFCD-201ENST00000460601 SERPINB6P35237 376 aa17.29■□□□□ 0.36
NELFCD-201ENST00000460601 GARSP41250 739 aaKnown RBP17.29■□□□□ 0.36
NELFCD-201ENST00000460601 BASP1P80723 227 aaKnown RBP17.29■□□□□ 0.36
NELFCD-201ENST00000460601 CBX2Q14781 532 aaPredicted RBP17.29■□□□□ 0.36
NELFCD-201ENST00000460601 PDK1Q15118 436 aa17.29■□□□□ 0.36
NELFCD-201ENST00000460601 ANKRD22Q5VYY1 191 aa17.29■□□□□ 0.36
NELFCD-201ENST00000460601 EMBQ6PCB8 327 aa17.29■□□□□ 0.36
NELFCD-201ENST00000460601 RIN3Q8TB24 985 aa17.29■□□□□ 0.36
NELFCD-201ENST00000460601 ING5Q8WYH8 240 aa17.29■□□□□ 0.36
NELFCD-201ENST00000460601 BHMTQ93088 406 aa17.29■□□□□ 0.36
NELFCD-201ENST00000460601 SHROOM3Q8TF72 1996 aa17.29■□□□□ 0.36
NELFCD-201ENST00000460601 NYNRINQ9P2P1 1898 aaKnown RBP17.29■□□□□ 0.36
NELFCD-201ENST00000460601 PTPN2P17706 415 aa17.29■□□□□ 0.36
NELFCD-201ENST00000460601 SLC11A2P49281 568 aa17.29■□□□□ 0.36
NELFCD-201ENST00000460601 EPHA5P54756 1037 aa17.29■□□□□ 0.36
NELFCD-201ENST00000460601 GALNT2Q10471 571 aa17.29■□□□□ 0.36
NELFCD-201ENST00000460601 CASP8Q14790 479 aa17.29■□□□□ 0.36
NELFCD-201ENST00000460601 DUSP6Q16828 381 aa17.29■□□□□ 0.36
NELFCD-201ENST00000460601 GPR158Q5T848 1215 aa17.29■□□□□ 0.36
NELFCD-201ENST00000460601 RHBDF2Q6PJF5 856 aa17.29■□□□□ 0.36
NELFCD-201ENST00000460601 RTP4Q96DX8 246 aa17.29■□□□□ 0.36
NELFCD-201ENST00000460601 ZNF419Q96HQ0 510 aaPredicted RBP17.29■□□□□ 0.36
NELFCD-201ENST00000460601 GCNAQ96QF7 691 aa17.29■□□□□ 0.36
NELFCD-201ENST00000460601 ZNF212Q9UDV6 495 aa17.29■□□□□ 0.36
NELFCD-201ENST00000460601 ANAPC5Q9UJX4 755 aa17.29■□□□□ 0.36
NELFCD-201ENST00000460601 ZFP37Q9Y6Q3 630 aaPredicted RBP17.29■□□□□ 0.36
NELFCD-201ENST00000460601 F5H5T6 163 aa17.28■□□□□ 0.36
NELFCD-201ENST00000460601 DNALI1O14645 258 aaPredicted RBP17.28■□□□□ 0.36
NELFCD-201ENST00000460601 PPP1R12AO14974 1030 aaPredicted RBP17.28■□□□□ 0.36
NELFCD-201ENST00000460601 ITIH2P19823 946 aa17.28■□□□□ 0.36
NELFCD-201ENST00000460601 HOXA9P31269 272 aa17.28■□□□□ 0.36
NELFCD-201ENST00000460601 RNASEH2BQ5TBB1 312 aaKnown RBP17.28■□□□□ 0.36
NELFCD-201ENST00000460601 HIBCHQ6NVY1 386 aaPredicted RBP17.28■□□□□ 0.36
NELFCD-201ENST00000460601 BZW1Q7L1Q6 419 aaKnown RBP17.28■□□□□ 0.36
NELFCD-201ENST00000460601 CCDC25Q86WR0 208 aa17.28■□□□□ 0.36
NELFCD-201ENST00000460601 OR52K2Q8NGK3 314 aa17.28■□□□□ 0.36
NELFCD-201ENST00000460601 CPT1BQ92523 772 aa17.28■□□□□ 0.36
NELFCD-201ENST00000460601 ZSWIM3Q96MP5 696 aa17.28■□□□□ 0.36
NELFCD-201ENST00000460601 PRKD2Q9BZL6 878 aa17.28■□□□□ 0.36
NELFCD-201ENST00000460601 PRDM16Q9HAZ2 1276 aa17.28■□□□□ 0.36
NELFCD-201ENST00000460601 PPARGC1AQ9UBK2 798 aaKnown RBP17.28■□□□□ 0.36
NELFCD-201ENST00000460601 RNF103O00237 685 aa17.27■□□□□ 0.36
NELFCD-201ENST00000460601 METTL18O95568 372 aa17.27■□□□□ 0.36
NELFCD-201ENST00000460601 BMP8BP34820 402 aa17.27■□□□□ 0.36
NELFCD-201ENST00000460601 PPIDQ08752 370 aaKnown RBP17.27■□□□□ 0.36
NELFCD-201ENST00000460601 WASHC5Q12768 1159 aa17.27■□□□□ 0.36
NELFCD-201ENST00000460601 ZBTB17Q13105 803 aa17.27■□□□□ 0.36
NELFCD-201ENST00000460601 TMC3Q7Z5M5 1100 aa17.27■□□□□ 0.36
NELFCD-201ENST00000460601 EIF1ADQ8N9N8 165 aaKnown RBP17.27■□□□□ 0.36
NELFCD-201ENST00000460601 CAVIN3Q969G5 261 aa17.27■□□□□ 0.36
NELFCD-201ENST00000460601 TMEM248Q9NWD8 314 aa17.27■□□□□ 0.36
NELFCD-201ENST00000460601 CFAP97Q9P2B7 532 aa17.27■□□□□ 0.36
NELFCD-201ENST00000460601 TPX2Q9ULW0 747 aaKnown RBP17.27■□□□□ 0.36
NELFCD-201ENST00000460601 ATP8A1Q9Y2Q0 1164 aa17.27■□□□□ 0.36
NELFCD-201ENST00000460601 TRAV19A0A0A6YYK7 116 aa17.27■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms