RNA–Protein interactions for RNA: ENST00000460265.5

LMNB1-203, Transcript of lamin B1, humanhuman

TSL 1 (best)

Gene LMNB1, Length 3,475 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNB1-203ENST00000460265 KATNAL1Q9BW62 490 aa15.8■□□□□ 0.12
LMNB1-203ENST00000460265 ATXN3LQ9H3M9 355 aa15.8■□□□□ 0.12
LMNB1-203ENST00000460265 EDF1O60869 148 aaKnown RBP15.79■□□□□ 0.12
LMNB1-203ENST00000460265 NCF2P19878 526 aaPredicted RBP15.79■□□□□ 0.12
LMNB1-203ENST00000460265 RPL10AP62906 217 aaKnown RBP15.79■□□□□ 0.12
LMNB1-203ENST00000460265 THOC5Q13769 683 aaKnown RBP15.79■□□□□ 0.12
LMNB1-203ENST00000460265 GRB14Q14449 540 aa15.79■□□□□ 0.12
LMNB1-203ENST00000460265 ZNF670Q9BS34 389 aa15.79■□□□□ 0.12
LMNB1-203ENST00000460265 USP29Q9HBJ7 922 aa15.79■□□□□ 0.12
LMNB1-203ENST00000460265 FLRT1Q9NZU1 646 aa15.79■□□□□ 0.12
LMNB1-203ENST00000460265 GRID1Q9ULK0 1009 aa15.79■□□□□ 0.12
LMNB1-203ENST00000460265 FIS1Q9Y3D6 152 aa15.79■□□□□ 0.12
LMNB1-203ENST00000460265 GMEB1Q9Y692 573 aa15.79■□□□□ 0.12
LMNB1-203ENST00000460265 FER1L6Q2WGJ9 1857 aa15.79■□□□□ 0.12
LMNB1-203ENST00000460265 SDR42E2A6NKP2 422 aa15.79■□□□□ 0.12
LMNB1-203ENST00000460265 YJEFN3A6XGL0 299 aa15.79■□□□□ 0.12
LMNB1-203ENST00000460265 T-ENOLP0DO92 83 aa15.79■□□□□ 0.12
LMNB1-203ENST00000460265 RGS2P41220 211 aa15.79■□□□□ 0.12
LMNB1-203ENST00000460265 GABRB2P47870 512 aa15.79■□□□□ 0.12
LMNB1-203ENST00000460265 GSTA3Q16772 222 aa15.79■□□□□ 0.12
LMNB1-203ENST00000460265 SLC44A4Q53GD3 710 aa15.79■□□□□ 0.12
LMNB1-203ENST00000460265 STKLD1Q8NE28 680 aa15.79■□□□□ 0.12
LMNB1-203ENST00000460265 OR52K1Q8NGK4 314 aa15.79■□□□□ 0.12
LMNB1-203ENST00000460265 CEP70Q8NHQ1 597 aa15.79■□□□□ 0.12
LMNB1-203ENST00000460265 NR1H4Q96RI1 486 aaPredicted RBP15.79■□□□□ 0.12
LMNB1-203ENST00000460265 TTC1Q99614 292 aa15.79■□□□□ 0.12
LMNB1-203ENST00000460265 ACSS2Q9NR19 701 aa15.79■□□□□ 0.12
LMNB1-203ENST00000460265 DCAF8L1A6NGE4 600 aa15.78■□□□□ 0.12
LMNB1-203ENST00000460265 GPR32O75388 356 aa15.78■□□□□ 0.12
LMNB1-203ENST00000460265 ASLP04424 464 aa15.78■□□□□ 0.12
LMNB1-203ENST00000460265 HMBSP08397 361 aa15.78■□□□□ 0.12
LMNB1-203ENST00000460265 ERCC2P18074 760 aa15.78■□□□□ 0.12
LMNB1-203ENST00000460265 IL4RP24394 825 aa15.78■□□□□ 0.12
LMNB1-203ENST00000460265 MRPS5P82675 430 aaKnown RBP15.78■□□□□ 0.12
LMNB1-203ENST00000460265 MAMDC4Q6UXC1 1216 aa15.78■□□□□ 0.12
LMNB1-203ENST00000460265 SLC26A9Q7LBE3 791 aa15.78■□□□□ 0.12
LMNB1-203ENST00000460265 NUP205Q92621 2012 aa15.78■□□□□ 0.12
LMNB1-203ENST00000460265 TRIP11Q15643 1979 aa15.78■□□□□ 0.12
LMNB1-203ENST00000460265 CCDC22O60826 627 aa15.78■□□□□ 0.12
LMNB1-203ENST00000460265 CD52P31358 61 aa15.78■□□□□ 0.12
LMNB1-203ENST00000460265 ATG16L1Q676U5 607 aa15.78■□□□□ 0.12
LMNB1-203ENST00000460265 HIPK4Q8NE63 616 aa15.78■□□□□ 0.12
LMNB1-203ENST00000460265 GSDMBQ8TAX9 411 aa15.78■□□□□ 0.12
LMNB1-203ENST00000460265 PPP4R1Q8TF05 950 aa15.78■□□□□ 0.12
LMNB1-203ENST00000460265 SH3TC2Q8TF17 1288 aa15.78■□□□□ 0.12
LMNB1-203ENST00000460265 TMEM120AQ9BXJ8 343 aa15.78■□□□□ 0.12
LMNB1-203ENST00000460265 DUSP16Q9BY84 665 aa15.78■□□□□ 0.12
LMNB1-203ENST00000460265 DDX18Q9NVP1 670 aaKnown RBP15.78■□□□□ 0.12
LMNB1-203ENST00000460265 KIF13BQ9NQT8 1826 aa15.78■□□□□ 0.12
LMNB1-203ENST00000460265 FUT4P22083 530 aa15.78■□□□□ 0.12
LMNB1-203ENST00000460265 ADARP55265 1226 aaKnown RBP15.78■□□□□ 0.12
LMNB1-203ENST00000460265 SDHAF4Q5VUM1 108 aa15.78■□□□□ 0.12
LMNB1-203ENST00000460265 ZDHHC17Q8IUH5 632 aa15.78■□□□□ 0.12
LMNB1-203ENST00000460265 NAT14Q8WUY8 206 aa15.78■□□□□ 0.12
LMNB1-203ENST00000460265 DCAKDQ8WVC6 231 aa15.78■□□□□ 0.12
LMNB1-203ENST00000460265 AZIN2Q96A70 460 aa15.78■□□□□ 0.12
LMNB1-203ENST00000460265 HSFY1Q96LI6 401 aa15.78■□□□□ 0.12
LMNB1-203ENST00000460265 PAAF1Q9BRP4 392 aa15.78■□□□□ 0.12
LMNB1-203ENST00000460265 TKTL2Q9H0I9 626 aa15.78■□□□□ 0.12
LMNB1-203ENST00000460265 XAB2Q9HCS7 855 aaKnown RBP15.78■□□□□ 0.12
LMNB1-203ENST00000460265 FAM105AQ9NUU6 356 aa15.78■□□□□ 0.12
LMNB1-203ENST00000460265 ABI2Q9NYB9 513 aaPredicted RBP15.78■□□□□ 0.12
LMNB1-203ENST00000460265 FNDC3AQ9Y2H6 1198 aaKnown RBP15.78■□□□□ 0.12
LMNB1-203ENST00000460265 SPAG6O75602 509 aa15.77■□□□□ 0.12
LMNB1-203ENST00000460265 NOS2P35228 1153 aa15.77■□□□□ 0.12
LMNB1-203ENST00000460265 GMPRP36959 345 aa15.77■□□□□ 0.12
LMNB1-203ENST00000460265 CDK7P50613 346 aa15.77■□□□□ 0.12
LMNB1-203ENST00000460265 CRYBB1P53674 252 aaPredicted RBP15.77■□□□□ 0.12
LMNB1-203ENST00000460265 STX3Q13277 289 aa15.77■□□□□ 0.12
LMNB1-203ENST00000460265 PCSK7Q16549 785 aa15.77■□□□□ 0.12
LMNB1-203ENST00000460265 BTBD8Q5XKL5 378 aa15.77■□□□□ 0.12
LMNB1-203ENST00000460265 SLC44A1Q8WWI5 657 aa15.77■□□□□ 0.12
LMNB1-203ENST00000460265 WNT8BQ93098 351 aa15.77■□□□□ 0.12
LMNB1-203ENST00000460265 APOPT1Q96IL0 206 aa15.77■□□□□ 0.12
LMNB1-203ENST00000460265 FAM193BQ96PV7 902 aaPredicted RBP15.77■□□□□ 0.12
LMNB1-203ENST00000460265 CADM1Q9BY67 442 aaKnown RBP15.77■□□□□ 0.12
LMNB1-203ENST00000460265 VRTNQ9H8Y1 702 aa15.77■□□□□ 0.12
LMNB1-203ENST00000460265 PPCSQ9HAB8 311 aa15.77■□□□□ 0.12
LMNB1-203ENST00000460265 POPDC2Q9HBU9 364 aa15.77■□□□□ 0.12
LMNB1-203ENST00000460265 ARHGEF4Q9NR80 690 aa15.77■□□□□ 0.12
LMNB1-203ENST00000460265 WASF2Q9Y6W5 498 aa15.77■□□□□ 0.12
LMNB1-203ENST00000460265 NRP1O14786 923 aa15.77■□□□□ 0.12
LMNB1-203ENST00000460265 F2P00734 622 aa15.77■□□□□ 0.12
LMNB1-203ENST00000460265 CSH1P0DML2 217 aa15.77■□□□□ 0.12
LMNB1-203ENST00000460265 CSH2P0DML3 217 aa15.77■□□□□ 0.12
LMNB1-203ENST00000460265 PTPN7P35236 360 aa15.77■□□□□ 0.12
LMNB1-203ENST00000460265 CFAP61Q8NHU2 1237 aa15.77■□□□□ 0.12
LMNB1-203ENST00000460265 CATSPER2Q96P56 530 aa15.77■□□□□ 0.12
LMNB1-203ENST00000460265 EBNA1BP2Q99848 306 aaKnown RBP15.77■□□□□ 0.12
LMNB1-203ENST00000460265 ANGPTL2Q9UKU9 493 aa15.77■□□□□ 0.12
LMNB1-203ENST00000460265 RPL26L1Q9UNX3 145 aaKnown RBP15.77■□□□□ 0.12
LMNB1-203ENST00000460265 NME7Q9Y5B8 376 aa15.77■□□□□ 0.12
LMNB1-203ENST00000460265 PMPCBO75439 489 aa15.77■□□□□ 0.11
LMNB1-203ENST00000460265 SLC25A52Q3SY17 297 aa15.77■□□□□ 0.11
LMNB1-203ENST00000460265 CCDC92Q53HC0 331 aaPredicted RBP15.77■□□□□ 0.11
LMNB1-203ENST00000460265 HSP90AA5PQ58FG0 334 aa15.77■□□□□ 0.11
LMNB1-203ENST00000460265 IPMKQ8NFU5 416 aa15.77■□□□□ 0.11
LMNB1-203ENST00000460265 KBTBD7Q8WVZ9 684 aa15.77■□□□□ 0.11
LMNB1-203ENST00000460265 PCED1BQ96HM7 432 aa15.77■□□□□ 0.11
LMNB1-203ENST00000460265 STARD13Q9Y3M8 1113 aa15.77■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms