RNA–Protein interactions for RNA: ENST00000460035.1

CCDC12-204, Transcript of coiled-coil domain containing 12, humanhuman

TSL 2

Gene CCDC12, Length 572 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC12-204ENST00000460035 TCF4P15884 667 aa11.18□□□□□ -0.62
CCDC12-204ENST00000460035 POLR2EP19388 210 aaKnown RBP11.18□□□□□ -0.62
CCDC12-204ENST00000460035 HLA-FP30511 346 aa11.18□□□□□ -0.62
CCDC12-204ENST00000460035 L1CAMP32004 1257 aa11.18□□□□□ -0.62
CCDC12-204ENST00000460035 CD70P32970 193 aa11.18□□□□□ -0.62
CCDC12-204ENST00000460035 GJC1P36383 396 aa11.18□□□□□ -0.62
CCDC12-204ENST00000460035 ARHGAP25P42331 645 aa11.18□□□□□ -0.62
CCDC12-204ENST00000460035 NUMBP49757 651 aa11.18□□□□□ -0.62
CCDC12-204ENST00000460035 LMAN2Q12907 356 aa11.18□□□□□ -0.62
CCDC12-204ENST00000460035 CA9Q16790 459 aa11.18□□□□□ -0.62
CCDC12-204ENST00000460035 GEN1Q17RS7 908 aa11.18□□□□□ -0.62
CCDC12-204ENST00000460035 SMTNL2Q2TAL5 461 aa11.18□□□□□ -0.62
CCDC12-204ENST00000460035 ALFQ53S48 1182 aa11.18□□□□□ -0.62
CCDC12-204ENST00000460035 PPP6R3Q5H9R7 873 aaPredicted RBP11.18□□□□□ -0.62
CCDC12-204ENST00000460035 FSCBQ5H9T9 825 aa11.18□□□□□ -0.62
CCDC12-204ENST00000460035 Q6ZS52 159 aa11.18□□□□□ -0.62
CCDC12-204ENST00000460035 CYP4V2Q6ZWL3 525 aaPredicted RBP11.18□□□□□ -0.62
CCDC12-204ENST00000460035 CHST9Q7L1S5 443 aa11.18□□□□□ -0.62
CCDC12-204ENST00000460035 ANKS1BQ7Z6G8 1248 aa11.18□□□□□ -0.62
CCDC12-204ENST00000460035 TFAP2DQ7Z6R9 452 aa11.18□□□□□ -0.62
CCDC12-204ENST00000460035 CPNE8Q86YQ8 564 aa11.18□□□□□ -0.62
CCDC12-204ENST00000460035 PSTKQ8IV42 348 aaKnown RBP11.18□□□□□ -0.62
CCDC12-204ENST00000460035 TXLNBQ8N3L3 684 aa11.18□□□□□ -0.62
CCDC12-204ENST00000460035 DDX51Q8N8A6 666 aaKnown RBP eCLIP11.18□□□□□ -0.62
CCDC12-204ENST00000460035 RPLP0P6Q8NHW5 317 aa11.18□□□□□ -0.62
CCDC12-204ENST00000460035 UCMAQ8WVF2 138 aa11.18□□□□□ -0.62
CCDC12-204ENST00000460035 HSPH1Q92598 858 aa11.18□□□□□ -0.62
CCDC12-204ENST00000460035 TBC1D31Q96DN5 1066 aa11.18□□□□□ -0.62
CCDC12-204ENST00000460035 PDLIM2Q96JY6 352 aa11.18□□□□□ -0.62
CCDC12-204ENST00000460035 PEBP4Q96S96 227 aa11.18□□□□□ -0.62
CCDC12-204ENST00000460035 PPP1R9BQ96SB3 815 aa11.18□□□□□ -0.62
CCDC12-204ENST00000460035 EPAS1Q99814 870 aa11.18□□□□□ -0.62
CCDC12-204ENST00000460035 IER2Q9BTL4 223 aa11.18□□□□□ -0.62
CCDC12-204ENST00000460035 SNRNP25Q9BV90 132 aaKnown RBP11.18□□□□□ -0.62
CCDC12-204ENST00000460035 ZDHHC4Q9NPG8 344 aa11.18□□□□□ -0.62
CCDC12-204ENST00000460035 ELOVL2Q9NXB9 296 aa11.18□□□□□ -0.62
CCDC12-204ENST00000460035 DLGAP2Q9P1A6 1054 aa11.18□□□□□ -0.62
CCDC12-204ENST00000460035 GGA2Q9UJY4 613 aa11.18□□□□□ -0.62
CCDC12-204ENST00000460035 AP4E1Q9UPM8 1137 aa11.18□□□□□ -0.62
CCDC12-204ENST00000460035 RCCD1A6NED2 376 aa11.17□□□□□ -0.62
CCDC12-204ENST00000460035 EEF2KO00418 725 aaKnown RBP11.17□□□□□ -0.62
CCDC12-204ENST00000460035 PJA2O43164 708 aa11.17□□□□□ -0.62
CCDC12-204ENST00000460035 BUB1O43683 1085 aa11.17□□□□□ -0.62
CCDC12-204ENST00000460035 ATG13O75143 517 aa11.17□□□□□ -0.62
CCDC12-204ENST00000460035 KLF8O95600 359 aaPredicted RBP11.17□□□□□ -0.62
CCDC12-204ENST00000460035 RHOCP08134 193 aa11.17□□□□□ -0.62
CCDC12-204ENST00000460035 RARAP10276 462 aa11.17□□□□□ -0.62
CCDC12-204ENST00000460035 CHRM1P11229 460 aaPredicted RBP11.17□□□□□ -0.62
CCDC12-204ENST00000460035 TNNT1P13805 278 aa11.17□□□□□ -0.62
CCDC12-204ENST00000460035 IL1R2P27930 398 aa11.17□□□□□ -0.62
CCDC12-204ENST00000460035 EPHB2P29323 1055 aa11.17□□□□□ -0.62
CCDC12-204ENST00000460035 OR1E1P30953 314 aa11.17□□□□□ -0.62
CCDC12-204ENST00000460035 MAN1A1P33908 653 aa11.17□□□□□ -0.62
CCDC12-204ENST00000460035 WASP42768 502 aa11.17□□□□□ -0.62
CCDC12-204ENST00000460035 VAV2P52735 878 aa11.17□□□□□ -0.62
CCDC12-204ENST00000460035 OXCT1P55809 520 aa11.17□□□□□ -0.62
CCDC12-204ENST00000460035 MRPS21P82921 87 aaKnown RBP11.17□□□□□ -0.62
CCDC12-204ENST00000460035 KIF5AQ12840 1032 aa11.17□□□□□ -0.62
CCDC12-204ENST00000460035 MTAPQ13126 283 aa11.17□□□□□ -0.62
CCDC12-204ENST00000460035 SEMA3BQ13214 749 aa11.17□□□□□ -0.62
CCDC12-204ENST00000460035 KRT81Q14533 505 aa11.17□□□□□ -0.62
CCDC12-204ENST00000460035 RNF219Q5W0B1 726 aaPredicted RBP11.17□□□□□ -0.62
CCDC12-204ENST00000460035 MBLAC2Q68D91 279 aa11.17□□□□□ -0.62
CCDC12-204ENST00000460035 SDE2Q6IQ49 451 aa11.17□□□□□ -0.62
CCDC12-204ENST00000460035 KIAA0907Q7Z7F0 614 aaPredicted RBP11.17□□□□□ -0.62
CCDC12-204ENST00000460035 AHI1Q8N157 1196 aa11.17□□□□□ -0.62
CCDC12-204ENST00000460035 ALLCQ8N6M5 410 aa11.17□□□□□ -0.62
CCDC12-204ENST00000460035 ZNF513Q8N8E2 541 aaPredicted RBP11.17□□□□□ -0.62
CCDC12-204ENST00000460035 DTWD2Q8NBA8 298 aa11.17□□□□□ -0.62
CCDC12-204ENST00000460035 WFIKKN2Q8TEU8 576 aa11.17□□□□□ -0.62
CCDC12-204ENST00000460035 USP33Q8TEY7 942 aa11.17□□□□□ -0.62
CCDC12-204ENST00000460035 SORCS1Q8WY21 1168 aa11.17□□□□□ -0.62
CCDC12-204ENST00000460035 LMLNQ96KR4 655 aa11.17□□□□□ -0.62
CCDC12-204ENST00000460035 MUC3BQ9H195 1237 aa11.17□□□□□ -0.62
CCDC12-204ENST00000460035 CHRDQ9H2X0 955 aa11.17□□□□□ -0.62
CCDC12-204ENST00000460035 RETREG1Q9H6L5 497 aa11.17□□□□□ -0.62
CCDC12-204ENST00000460035 PPARGC1AQ9UBK2 798 aaKnown RBP11.17□□□□□ -0.62
CCDC12-204ENST00000460035 PLA2G4CQ9UP65 541 aa11.17□□□□□ -0.62
CCDC12-204ENST00000460035 HYOU1Q9Y4L1 999 aa11.17□□□□□ -0.62
CCDC12-204ENST00000460035 DUSP10Q9Y6W6 482 aa11.17□□□□□ -0.62
CCDC12-204ENST00000460035 BTNL10A8MVZ5 291 aa11.16□□□□□ -0.62
CCDC12-204ENST00000460035 SPOPO43791 374 aa11.16□□□□□ -0.62
CCDC12-204ENST00000460035 ATP5BP06576 529 aaKnown RBP11.16□□□□□ -0.62
CCDC12-204ENST00000460035 RHOQP17081 205 aa11.16□□□□□ -0.62
CCDC12-204ENST00000460035 COMTP21964 271 aa11.16□□□□□ -0.62
CCDC12-204ENST00000460035 MZF1P28698 734 aaPredicted RBP11.16□□□□□ -0.62
CCDC12-204ENST00000460035 HOXC13P31276 330 aa11.16□□□□□ -0.62
CCDC12-204ENST00000460035 HTR7P34969 479 aa11.16□□□□□ -0.62
CCDC12-204ENST00000460035 CSKP41240 450 aa11.16□□□□□ -0.62
CCDC12-204ENST00000460035 KIR2DL1P43626 348 aaPredicted RBP11.16□□□□□ -0.62
CCDC12-204ENST00000460035 CXCL12P48061 93 aa11.16□□□□□ -0.62
CCDC12-204ENST00000460035 ZNF135P52742 658 aaPredicted RBP11.16□□□□□ -0.62
CCDC12-204ENST00000460035 NUBP1P53384 320 aa11.16□□□□□ -0.62
CCDC12-204ENST00000460035 TAS2R40P59535 323 aa11.16□□□□□ -0.62
CCDC12-204ENST00000460035 TPI1P60174 286 aa11.16□□□□□ -0.62
CCDC12-204ENST00000460035 CCZ1BP86790 482 aa11.16□□□□□ -0.62
CCDC12-204ENST00000460035 CCZ1P86791 482 aaPredicted RBP11.16□□□□□ -0.62
CCDC12-204ENST00000460035 SLC25A11Q02978 314 aaKnown RBP11.16□□□□□ -0.62
CCDC12-204ENST00000460035 GAS6Q14393 721 aa11.16□□□□□ -0.62
CCDC12-204ENST00000460035 EIF4HQ15056 248 aaKnown RBP11.16□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms