RNA–Protein interactions for RNA: ENST00000455883.2

CSMD3-204, Transcript of CUB and Sushi multiple domains 3, humanhuman

TSL 1 (best) BASIC

Gene CSMD3, Length 12,485 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD3-204ENST00000455883 AAASQ9NRG9 546 aa5.31□□□□□ -1.56
CSMD3-204ENST00000455883 SLIT3O75094 1523 aa5.31□□□□□ -1.56
CSMD3-204ENST00000455883 SPG11Q96JI7 2443 aa5.31□□□□□ -1.56
CSMD3-204ENST00000455883 OR14I1A6ND48 311 aa5.31□□□□□ -1.56
CSMD3-204ENST00000455883 MRPS14O60783 128 aaKnown RBP5.31□□□□□ -1.56
CSMD3-204ENST00000455883 MYL3P08590 195 aa5.31□□□□□ -1.56
CSMD3-204ENST00000455883 RPA1P27694 616 aa5.31□□□□□ -1.56
CSMD3-204ENST00000455883 RBM34P42696 430 aaKnown RBP5.31□□□□□ -1.56
CSMD3-204ENST00000455883 CDC16Q13042 620 aa5.31□□□□□ -1.56
CSMD3-204ENST00000455883 PDPK2PQ6A1A2 396 aa5.31□□□□□ -1.56
CSMD3-204ENST00000455883 SPERTQ8NA61 448 aa5.31□□□□□ -1.56
CSMD3-204ENST00000455883 TUBGCP5Q96RT8 1024 aa5.31□□□□□ -1.56
CSMD3-204ENST00000455883 VRK1Q99986 396 aaPredicted RBP5.31□□□□□ -1.56
CSMD3-204ENST00000455883 ZBTB21Q9ULJ3 1066 aa5.31□□□□□ -1.56
CSMD3-204ENST00000455883 STUB1Q9UNE7 303 aa5.31□□□□□ -1.56
CSMD3-204ENST00000455883 GMFGO60234 142 aa5.31□□□□□ -1.56
CSMD3-204ENST00000455883 SERPINF2P08697 491 aa5.31□□□□□ -1.56
CSMD3-204ENST00000455883 PGAM1P18669 254 aa5.31□□□□□ -1.56
CSMD3-204ENST00000455883 EPHA7Q15375 998 aa5.31□□□□□ -1.56
CSMD3-204ENST00000455883 ZBTB6Q15916 424 aa5.31□□□□□ -1.56
CSMD3-204ENST00000455883 C12orf56Q8IXR9 622 aa5.31□□□□□ -1.56
CSMD3-204ENST00000455883 DSN1Q9H410 356 aa5.31□□□□□ -1.56
CSMD3-204ENST00000455883 TASP1Q9H6P5 420 aa5.31□□□□□ -1.56
CSMD3-204ENST00000455883 CCDC177Q9NQR7 707 aaPredicted RBP5.31□□□□□ -1.56
CSMD3-204ENST00000455883 GIN1Q9NXP7 522 aa5.31□□□□□ -1.56
CSMD3-204ENST00000455883 HAO1Q9UJM8 370 aa5.31□□□□□ -1.56
CSMD3-204ENST00000455883 AGO2Q9UKV8 859 aaKnown RBP5.31□□□□□ -1.56
CSMD3-204ENST00000455883 FREM3P0C091 2139 aa5.31□□□□□ -1.56
CSMD3-204ENST00000455883 ZNF609O15014 1411 aa5.31□□□□□ -1.56
CSMD3-204ENST00000455883 VWDEQ8N2E2 1590 aa5.31□□□□□ -1.56
CSMD3-204ENST00000455883 LRRC10BA6NIK2 292 aa5.31□□□□□ -1.56
CSMD3-204ENST00000455883 G3V2T6 193 aa5.31□□□□□ -1.56
CSMD3-204ENST00000455883 APOC4-APOC2K7ER74 178 aa5.31□□□□□ -1.56
CSMD3-204ENST00000455883 KPNA6O60684 536 aa5.31□□□□□ -1.56
CSMD3-204ENST00000455883 TMCC2O75069 709 aa5.31□□□□□ -1.56
CSMD3-204ENST00000455883 RPS6KA4O75676 772 aa5.31□□□□□ -1.56
CSMD3-204ENST00000455883 APOC2P02655 101 aa5.31□□□□□ -1.56
CSMD3-204ENST00000455883 TMBIM6P55061 237 aa5.31□□□□□ -1.56
CSMD3-204ENST00000455883 CAMK1Q14012 370 aa5.31□□□□□ -1.56
CSMD3-204ENST00000455883 TEAD4Q15561 434 aa5.31□□□□□ -1.56
CSMD3-204ENST00000455883 SYTL3Q4VX76 610 aa5.31□□□□□ -1.56
CSMD3-204ENST00000455883 TRIM40Q6P9F5 258 aa5.31□□□□□ -1.56
CSMD3-204ENST00000455883 AHI1Q8N157 1196 aa5.31□□□□□ -1.56
CSMD3-204ENST00000455883 PI4K2BQ8TCG2 481 aa5.31□□□□□ -1.56
CSMD3-204ENST00000455883 ZBTB9Q96C00 473 aa5.31□□□□□ -1.56
CSMD3-204ENST00000455883 FAM111AQ96PZ2 611 aa5.31□□□□□ -1.56
CSMD3-204ENST00000455883 CLCC1Q96S66 551 aa5.31□□□□□ -1.56
CSMD3-204ENST00000455883 S100A13Q99584 98 aa5.31□□□□□ -1.56
CSMD3-204ENST00000455883 APOL6Q9BWW8 343 aa5.31□□□□□ -1.56
CSMD3-204ENST00000455883 PCDHGB2Q9Y5G2 931 aa5.31□□□□□ -1.56
CSMD3-204ENST00000455883 ARHGAP23Q9P227 1491 aa5.31□□□□□ -1.56
CSMD3-204ENST00000455883 LOC100653049A0A140TA62 436 aa5.31□□□□□ -1.56
CSMD3-204ENST00000455883 TRIM49BA6NDI0 452 aa5.31□□□□□ -1.56
CSMD3-204ENST00000455883 TRIM49D1C9J1S8 452 aa5.31□□□□□ -1.56
CSMD3-204ENST00000455883 SHOX2O60902 331 aaPredicted RBP5.31□□□□□ -1.56
CSMD3-204ENST00000455883 IPO13O94829 963 aaKnown RBP5.31□□□□□ -1.56
CSMD3-204ENST00000455883 FCER2P06734 321 aa5.31□□□□□ -1.56
CSMD3-204ENST00000455883 PRCPP42785 496 aa5.31□□□□□ -1.56
CSMD3-204ENST00000455883 CCNG1P51959 295 aa5.31□□□□□ -1.56
CSMD3-204ENST00000455883 RBBP7Q16576 425 aa5.31□□□□□ -1.56
CSMD3-204ENST00000455883 PDK4Q16654 411 aa5.31□□□□□ -1.56
CSMD3-204ENST00000455883 C5orf22Q49AR2 442 aa5.31□□□□□ -1.56
CSMD3-204ENST00000455883 NOTUMQ6P988 496 aa5.31□□□□□ -1.56
CSMD3-204ENST00000455883 BORAQ6PGQ7 559 aa5.31□□□□□ -1.56
CSMD3-204ENST00000455883 SLC35G2Q8TBE7 412 aa5.31□□□□□ -1.56
CSMD3-204ENST00000455883 PLEKHF1Q96S99 279 aa5.31□□□□□ -1.56
CSMD3-204ENST00000455883 CENPOQ9BU64 300 aa5.31□□□□□ -1.56
CSMD3-204ENST00000455883 MRI1Q9BV20 369 aa5.31□□□□□ -1.56
CSMD3-204ENST00000455883 NECTIN3Q9NQS3 549 aa5.31□□□□□ -1.56
CSMD3-204ENST00000455883 DDX20Q9UHI6 824 aaKnown RBP5.31□□□□□ -1.56
CSMD3-204ENST00000455883 CCNL1Q9UK58 526 aaPredicted RBP5.31□□□□□ -1.56
CSMD3-204ENST00000455883 RAB23Q9ULC3 237 aa5.31□□□□□ -1.56
CSMD3-204ENST00000455883 PCDHGA10Q9Y5H3 936 aa5.31□□□□□ -1.56
CSMD3-204ENST00000455883 SEC24BO95487 1268 aa5.31□□□□□ -1.56
CSMD3-204ENST00000455883 ATP6V1G2O95670 118 aa5.31□□□□□ -1.56
CSMD3-204ENST00000455883 SERPINA1P01009 418 aa5.31□□□□□ -1.56
CSMD3-204ENST00000455883 HNRNPH3P31942 346 aaKnown RBP5.31□□□□□ -1.56
CSMD3-204ENST00000455883 TMC3Q7Z5M5 1100 aa5.31□□□□□ -1.56
CSMD3-204ENST00000455883 ZNF605Q86T29 641 aa5.31□□□□□ -1.56
CSMD3-204ENST00000455883 CNTD1Q8N815 330 aa5.31□□□□□ -1.56
CSMD3-204ENST00000455883 ZFYVE19Q96K21 471 aa5.31□□□□□ -1.56
CSMD3-204ENST00000455883 TMEM109Q9BVC6 243 aa5.31□□□□□ -1.56
CSMD3-204ENST00000455883 LY9Q9HBG7 655 aa5.31□□□□□ -1.56
CSMD3-204ENST00000455883 SPATA2Q9UM82 520 aa5.31□□□□□ -1.56
CSMD3-204ENST00000455883 PHTF1Q9UMS5 762 aa5.31□□□□□ -1.56
CSMD3-204ENST00000455883 GPC6Q9Y625 555 aaPredicted RBP5.31□□□□□ -1.56
CSMD3-204ENST00000455883 AP3D1O14617 1153 aa5.31□□□□□ -1.56
CSMD3-204ENST00000455883 TCEA3O75764 348 aa5.31□□□□□ -1.56
CSMD3-204ENST00000455883 ZNF3P17036 446 aa5.31□□□□□ -1.56
CSMD3-204ENST00000455883 MAGEA8P43361 318 aa5.31□□□□□ -1.56
CSMD3-204ENST00000455883 RAB27AP51159 221 aa5.31□□□□□ -1.56
CSMD3-204ENST00000455883 NEK3P51956 506 aa5.31□□□□□ -1.56
CSMD3-204ENST00000455883 CMPK2Q5EBM0 449 aa5.31□□□□□ -1.56
CSMD3-204ENST00000455883 TMC2Q8TDI7 906 aa5.31□□□□□ -1.56
CSMD3-204ENST00000455883 TGFBRAP1Q8WUH2 860 aa5.31□□□□□ -1.56
CSMD3-204ENST00000455883 PRMT6Q96LA8 375 aaPredicted RBP5.31□□□□□ -1.56
CSMD3-204ENST00000455883 WDR24Q96S15 920 aa5.31□□□□□ -1.56
CSMD3-204ENST00000455883 ACTR6Q9GZN1 396 aa5.31□□□□□ -1.56
CSMD3-204ENST00000455883 ANKZF1Q9H8Y5 726 aa5.31□□□□□ -1.56
CSMD3-204ENST00000455883 TAS2R7Q9NYW3 318 aa5.31□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms