RNA–Protein interactions for RNA: ENST00000455732.5

USP39-208, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 3

Gene USP39, Length 623 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-208ENST00000455732 BCLAF3A2AJT9 711 aaKnown RBP17.89■□□□□ 0.45
USP39-208ENST00000455732 SIGLEC16A6NMB1 481 aa17.89■□□□□ 0.45
USP39-208ENST00000455732 CBFA2T2O43439 604 aa17.89■□□□□ 0.45
USP39-208ENST00000455732 FOXD2O60548 495 aaPredicted RBP17.89■□□□□ 0.45
USP39-208ENST00000455732 ATP5BP06576 529 aaKnown RBP17.89■□□□□ 0.45
USP39-208ENST00000455732 DLDP09622 509 aaKnown RBP17.89■□□□□ 0.45
USP39-208ENST00000455732 PDGFRAP16234 1089 aa17.89■□□□□ 0.45
USP39-208ENST00000455732 NDUFV2P19404 249 aa17.89■□□□□ 0.45
USP39-208ENST00000455732 MPLP40238 635 aa17.89■□□□□ 0.45
USP39-208ENST00000455732 ATXN1P54253 815 aaKnown RBP17.89■□□□□ 0.45
USP39-208ENST00000455732 ZBED6P86452 979 aa17.89■□□□□ 0.45
USP39-208ENST00000455732 STARD3Q14849 445 aa17.89■□□□□ 0.45
USP39-208ENST00000455732 FSCBQ5H9T9 825 aa17.89■□□□□ 0.45
USP39-208ENST00000455732 PPP1R15BQ5SWA1 713 aa17.89■□□□□ 0.45
USP39-208ENST00000455732 MBLAC2Q68D91 279 aa17.89■□□□□ 0.45
USP39-208ENST00000455732 DNAJC24Q6P3W2 148 aa17.89■□□□□ 0.45
USP39-208ENST00000455732 STRADAQ7RTN6 431 aa17.89■□□□□ 0.45
USP39-208ENST00000455732 PHLDB2Q86SQ0 1253 aa17.89■□□□□ 0.45
USP39-208ENST00000455732 CCAR2Q8N163 923 aaKnown RBP17.89■□□□□ 0.45
USP39-208ENST00000455732 SORCS1Q8WY21 1168 aa17.89■□□□□ 0.45
USP39-208ENST00000455732 CENPIQ92674 756 aaPredicted RBP17.89■□□□□ 0.45
USP39-208ENST00000455732 RPRD1AQ96P16 312 aaPredicted RBP17.89■□□□□ 0.45
USP39-208ENST00000455732 HAPLN3Q96S86 360 aa17.89■□□□□ 0.45
USP39-208ENST00000455732 TAS2R14Q9NYV8 317 aa17.89■□□□□ 0.45
USP39-208ENST00000455732 KIAA1522Q9P206 1035 aaPredicted RBP17.89■□□□□ 0.45
USP39-208ENST00000455732 BZW2Q9Y6E2 419 aaKnown RBP17.89■□□□□ 0.45
USP39-208ENST00000455732 H0Y626 953 aa17.88■□□□□ 0.45
USP39-208ENST00000455732 GJB6O95452 261 aa17.88■□□□□ 0.45
USP39-208ENST00000455732 ASLP04424 464 aa17.88■□□□□ 0.45
USP39-208ENST00000455732 GYPCP04921 128 aa17.88■□□□□ 0.45
USP39-208ENST00000455732 POLR2EP19388 210 aaKnown RBP17.88■□□□□ 0.45
USP39-208ENST00000455732 RFC1P35251 1148 aaPredicted RBP17.88■□□□□ 0.45
USP39-208ENST00000455732 OXCT1P55809 520 aa17.88■□□□□ 0.45
USP39-208ENST00000455732 ATP11AP98196 1134 aa17.88■□□□□ 0.45
USP39-208ENST00000455732 SLC12A1Q13621 1099 aa17.88■□□□□ 0.45
USP39-208ENST00000455732 BYSLQ13895 437 aaKnown RBP17.88■□□□□ 0.45
USP39-208ENST00000455732 SF3A2Q15428 464 aaKnown RBP17.88■□□□□ 0.45
USP39-208ENST00000455732 PTPRNQ16849 979 aa17.88■□□□□ 0.45
USP39-208ENST00000455732 HGSNATQ68CP4 663 aa17.88■□□□□ 0.45
USP39-208ENST00000455732 FAM131BQ86XD5 332 aa17.88■□□□□ 0.45
USP39-208ENST00000455732 ZNF683Q8IZ20 524 aa17.88■□□□□ 0.45
USP39-208ENST00000455732 KDM1BQ8NB78 822 aa17.88■□□□□ 0.45
USP39-208ENST00000455732 IGSF8Q969P0 613 aa17.88■□□□□ 0.45
USP39-208ENST00000455732 ERLEC1Q96DZ1 483 aa17.88■□□□□ 0.45
USP39-208ENST00000455732 SPACA7Q96KW9 195 aa17.88■□□□□ 0.45
USP39-208ENST00000455732 MRGPRX1Q96LB2 322 aa17.88■□□□□ 0.45
USP39-208ENST00000455732 TMEM245Q9H330 911 aa17.88■□□□□ 0.45
USP39-208ENST00000455732 INTS6Q9UL03 887 aaKnown RBP17.88■□□□□ 0.45
USP39-208ENST00000455732 VANGL2Q9ULK5 521 aa17.88■□□□□ 0.45
USP39-208ENST00000455732 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP17.88■□□□□ 0.45
USP39-208ENST00000455732 IGLV3-10A0A075B6K4 115 aa17.87■□□□□ 0.45
USP39-208ENST00000455732 DDX3XO00571 662 aaKnown RBP eCLIP17.87■□□□□ 0.459e-13■■■■□ 21.9
USP39-208ENST00000455732 ZBTB24O43167 697 aaPredicted RBP17.87■□□□□ 0.45
USP39-208ENST00000455732 GDF9O60383 454 aa17.87■□□□□ 0.45
USP39-208ENST00000455732 CLDN11O75508 207 aa17.87■□□□□ 0.45
USP39-208ENST00000455732 C7P10643 843 aa17.87■□□□□ 0.45
USP39-208ENST00000455732 GPD1P21695 349 aa17.87■□□□□ 0.45
USP39-208ENST00000455732 RRM1P23921 792 aa17.87■□□□□ 0.45
USP39-208ENST00000455732 PRKCHP24723 683 aa17.87■□□□□ 0.45
USP39-208ENST00000455732 CSKP41240 450 aa17.87■□□□□ 0.45
USP39-208ENST00000455732 CREB5Q02930 508 aa17.87■□□□□ 0.45
USP39-208ENST00000455732 C15orf59Q2T9L4 293 aaPredicted RBP17.87■□□□□ 0.45
USP39-208ENST00000455732 PITRM1Q5JRX3 1037 aa17.87■□□□□ 0.45
USP39-208ENST00000455732 CXorf57Q6NSI4 855 aaKnown RBP17.87■□□□□ 0.45
USP39-208ENST00000455732 WDR59Q6PJI9 974 aa17.87■□□□□ 0.45
USP39-208ENST00000455732 SERPINA13PQ6UXR4 307 aa17.87■□□□□ 0.45
USP39-208ENST00000455732 C14orf80Q86SX3 495 aa17.87■□□□□ 0.45
USP39-208ENST00000455732 CIR1Q86X95 450 aaPredicted RBP17.87■□□□□ 0.45
USP39-208ENST00000455732 RNF214Q8ND24 703 aa17.87■□□□□ 0.45
USP39-208ENST00000455732 NETO1Q8TDF5 533 aa17.87■□□□□ 0.45
USP39-208ENST00000455732 SIK2Q9H0K1 926 aa17.87■□□□□ 0.45
USP39-208ENST00000455732 SMOC1Q9H4F8 434 aa17.87■□□□□ 0.45
USP39-208ENST00000455732 VPS45Q9NRW7 570 aa17.87■□□□□ 0.45
USP39-208ENST00000455732 RXFP3Q9NSD7 469 aa17.87■□□□□ 0.45
USP39-208ENST00000455732 PLA2G4CQ9UP65 541 aa17.87■□□□□ 0.45
USP39-208ENST00000455732 LUC7L2Q9Y383 392 aaKnown RBP17.87■□□□□ 0.45
USP39-208ENST00000455732 NYNRINQ9P2P1 1898 aaKnown RBP17.86■□□□□ 0.45
USP39-208ENST00000455732 NUMA1Q14980 2115 aa17.86■□□□□ 0.45
USP39-208ENST00000455732 LOC105378220A0A1B0GUY1 285 aaPredicted RBP17.86■□□□□ 0.45
USP39-208ENST00000455732 ANKRD62A6NC57 917 aa17.86■□□□□ 0.45
USP39-208ENST00000455732 DRGXA6NNA5 263 aa17.86■□□□□ 0.45
USP39-208ENST00000455732 SYNCRIPO60506 623 aaKnown RBP17.86■□□□□ 0.45
USP39-208ENST00000455732 MOCS3O95396 460 aa17.86■□□□□ 0.45
USP39-208ENST00000455732 SERPING1P05155 500 aa17.86■□□□□ 0.45
USP39-208ENST00000455732 SKILP12757 684 aa17.86■□□□□ 0.45
USP39-208ENST00000455732 GGCXP38435 758 aa17.86■□□□□ 0.45
USP39-208ENST00000455732 IRAK1P51617 712 aa17.86■□□□□ 0.45
USP39-208ENST00000455732 ZNF143P52747 638 aaPredicted RBP17.86■□□□□ 0.45
USP39-208ENST00000455732 PLK1P53350 603 aa17.86■□□□□ 0.45
USP39-208ENST00000455732 CDH4P55283 916 aa17.86■□□□□ 0.45
USP39-208ENST00000455732 HDAC4P56524 1084 aa17.86■□□□□ 0.45
USP39-208ENST00000455732 NRG1Q02297 640 aaPredicted RBP17.86■□□□□ 0.45
USP39-208ENST00000455732 TRIM14Q14142 442 aa17.86■□□□□ 0.45
USP39-208ENST00000455732 PLEKHG6Q3KR16 790 aa17.86■□□□□ 0.45
USP39-208ENST00000455732 FNDC3BQ53EP0 1204 aaKnown RBP17.86■□□□□ 0.45
USP39-208ENST00000455732 SPDYCQ5MJ68 293 aa17.86■□□□□ 0.45
USP39-208ENST00000455732 ARTNQ5T4W7 220 aa17.86■□□□□ 0.45
USP39-208ENST00000455732 SPECC1LQ69YQ0 1117 aa17.86■□□□□ 0.45
USP39-208ENST00000455732 PLEKHA7Q6IQ23 1121 aa17.86■□□□□ 0.45
USP39-208ENST00000455732 FAM172AQ8WUF8 416 aa17.86■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms