RNA–Protein interactions for RNA: ENST00000455631.5

PTPRA-208, Transcript of protein tyrosine phosphatase, receptor type A, humanhuman

TSL 5

Gene PTPRA, Length 1,107 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRA-208ENST00000455631 ARID5BQ14865 1188 aa24.08■■□□□ 1.45
PTPRA-208ENST00000455631 PROX2Q3B8N5 592 aa24.08■■□□□ 1.45
PTPRA-208ENST00000455631 ARHGAP40Q5TG30 622 aa24.08■■□□□ 1.45
PTPRA-208ENST00000455631 NUGGCQ68CJ6 796 aa24.08■■□□□ 1.45
PTPRA-208ENST00000455631 TBC1D3GQ6DHY5 549 aa24.08■■□□□ 1.45
PTPRA-208ENST00000455631 TBC1D3CQ6IPX1 549 aa24.08■■□□□ 1.45
PTPRA-208ENST00000455631 UNC45BQ8IWX7 931 aa24.08■■□□□ 1.45
PTPRA-208ENST00000455631 TBC1D3Q8IZP1 549 aaPredicted RBP24.08■■□□□ 1.45
PTPRA-208ENST00000455631 MFSD2AQ8NA29 543 aa24.08■■□□□ 1.45
PTPRA-208ENST00000455631 IRX2Q9BZI1 471 aaPredicted RBP24.08■■□□□ 1.45
PTPRA-208ENST00000455631 HESX1Q9UBX0 185 aa24.08■■□□□ 1.45
PTPRA-208ENST00000455631 ERVW-1Q9UQF0 538 aa24.08■■□□□ 1.45
PTPRA-208ENST00000455631 TRAF3IP3Q9Y228 551 aa24.08■■□□□ 1.45
PTPRA-208ENST00000455631 CEP83Q9Y592 693 aa24.08■■□□□ 1.45
PTPRA-208ENST00000455631 ATMQ13315 3056 aa24.08■■□□□ 1.45
PTPRA-208ENST00000455631 COL6A6A6NMZ7 2263 aa24.08■■□□□ 1.44
PTPRA-208ENST00000455631 TARSL2A2RTX5 802 aaKnown RBP24.07■■□□□ 1.44
PTPRA-208ENST00000455631 ACSL4O60488 711 aa24.07■■□□□ 1.44
PTPRA-208ENST00000455631 ADH1BP00325 375 aa24.07■■□□□ 1.44
PTPRA-208ENST00000455631 IGLV3-27P01718 113 aa24.07■■□□□ 1.44
PTPRA-208ENST00000455631 C5AR1P21730 350 aa24.07■■□□□ 1.44
PTPRA-208ENST00000455631 CTSOP43234 321 aaPredicted RBP24.07■■□□□ 1.44
PTPRA-208ENST00000455631 ME1P48163 572 aa24.07■■□□□ 1.44
PTPRA-208ENST00000455631 UCNP55089 124 aa24.07■■□□□ 1.44
PTPRA-208ENST00000455631 DAB2P98082 770 aa24.07■■□□□ 1.44
PTPRA-208ENST00000455631 E2F1Q01094 437 aa24.07■■□□□ 1.44
PTPRA-208ENST00000455631 PITRM1Q5JRX3 1037 aa24.07■■□□□ 1.44
PTPRA-208ENST00000455631 RESP18Q5W5W9 173 aa24.07■■□□□ 1.44
PTPRA-208ENST00000455631 KRT39Q6A163 491 aa24.07■■□□□ 1.44
PTPRA-208ENST00000455631 MMS22LQ6ZRQ5 1243 aa24.07■■□□□ 1.44
PTPRA-208ENST00000455631 CCDC117Q8IWD4 279 aaPredicted RBP24.07■■□□□ 1.44
PTPRA-208ENST00000455631 STK40Q8N2I9 435 aa24.07■■□□□ 1.44
PTPRA-208ENST00000455631 KDM1BQ8NB78 822 aa24.07■■□□□ 1.44
PTPRA-208ENST00000455631 PAGE5Q96GU1 130 aa24.07■■□□□ 1.44
PTPRA-208ENST00000455631 INTS4Q96HW7 963 aaKnown RBP24.07■■□□□ 1.44
PTPRA-208ENST00000455631 MAST4O15021 2626 aa24.07■■□□□ 1.44
PTPRA-208ENST00000455631 PYCARD-AS1I3L0S3 204 aa24.06■■□□□ 1.44
PTPRA-208ENST00000455631 LATO43561 262 aa24.06■■□□□ 1.44
PTPRA-208ENST00000455631 SIGLEC6O43699 453 aa24.06■■□□□ 1.44
PTPRA-208ENST00000455631 IL1BP01584 269 aa24.06■■□□□ 1.44
PTPRA-208ENST00000455631 MPOP05164 745 aa24.06■■□□□ 1.44
PTPRA-208ENST00000455631 LCP1P13796 627 aa24.06■■□□□ 1.44
PTPRA-208ENST00000455631 MAT2AP31153 395 aaKnown RBP24.06■■□□□ 1.44
PTPRA-208ENST00000455631 RPS24P62847 133 aaKnown RBP24.06■■□□□ 1.44
PTPRA-208ENST00000455631 FOXD4L6Q3SYB3 417 aaPredicted RBP24.06■■□□□ 1.44
PTPRA-208ENST00000455631 RNF219Q5W0B1 726 aaPredicted RBP24.06■■□□□ 1.44
PTPRA-208ENST00000455631 NADSYN1Q6IA69 706 aa24.06■■□□□ 1.44
PTPRA-208ENST00000455631 MSANTD2Q6P1R3 559 aa24.06■■□□□ 1.44
PTPRA-208ENST00000455631 FOXD4L3Q6VB84 417 aaPredicted RBP24.06■■□□□ 1.44
PTPRA-208ENST00000455631 PRPF39Q86UA1 669 aaKnown RBP24.06■■□□□ 1.44
PTPRA-208ENST00000455631 FAM181AQ8N9Y4 354 aa24.06■■□□□ 1.44
PTPRA-208ENST00000455631 UBA3Q8TBC4 463 aa24.06■■□□□ 1.44
PTPRA-208ENST00000455631 WBP1Q96G27 269 aa24.06■■□□□ 1.44
PTPRA-208ENST00000455631 FAXDC2Q96IV6 333 aa24.06■■□□□ 1.44
PTPRA-208ENST00000455631 ZNF578Q96N58 590 aaPredicted RBP24.06■■□□□ 1.44
PTPRA-208ENST00000455631 FAM129BQ96TA1 746 aa24.06■■□□□ 1.44
PTPRA-208ENST00000455631 SEMA4CQ9C0C4 833 aa24.06■■□□□ 1.44
PTPRA-208ENST00000455631 PCDHA7Q9UN72 937 aa24.06■■□□□ 1.44
PTPRA-208ENST00000455631 TRIM38O00635 465 aa24.05■■□□□ 1.44
PTPRA-208ENST00000455631 MAGEC1O60732 1142 aa24.05■■□□□ 1.44
PTPRA-208ENST00000455631 SRPRAP08240 638 aaKnown RBP24.05■■□□□ 1.44
PTPRA-208ENST00000455631 CD19P15391 556 aa24.05■■□□□ 1.44
PTPRA-208ENST00000455631 MZF1P28698 734 aaPredicted RBP24.05■■□□□ 1.44
PTPRA-208ENST00000455631 MXI1P50539 228 aa24.05■■□□□ 1.44
PTPRA-208ENST00000455631 DAOAP59103 153 aa24.05■■□□□ 1.44
PTPRA-208ENST00000455631 GABREP78334 506 aa24.05■■□□□ 1.44
PTPRA-208ENST00000455631 ENPEPQ07075 957 aa24.05■■□□□ 1.44
PTPRA-208ENST00000455631 SGO2Q562F6 1265 aa24.05■■□□□ 1.44
PTPRA-208ENST00000455631 MYEOVQ96EZ4 313 aa24.05■■□□□ 1.44
PTPRA-208ENST00000455631 HIC2Q96JB3 615 aa24.05■■□□□ 1.44
PTPRA-208ENST00000455631 CLMPQ9H6B4 373 aa24.05■■□□□ 1.44
PTPRA-208ENST00000455631 CNGB3Q9NQW8 809 aa24.05■■□□□ 1.44
PTPRA-208ENST00000455631 ITIH6Q6UXX5 1313 aa24.05■■□□□ 1.44
PTPRA-208ENST00000455631 ACTN4O43707 911 aaKnown RBP24.04■■□□□ 1.44
PTPRA-208ENST00000455631 MOCS3O95396 460 aa24.04■■□□□ 1.44
PTPRA-208ENST00000455631 GTF2H1P32780 548 aa24.04■■□□□ 1.44
PTPRA-208ENST00000455631 PSMC2P35998 433 aaKnown RBP24.04■■□□□ 1.44
PTPRA-208ENST00000455631 TBX4P57082 545 aa24.04■■□□□ 1.44
PTPRA-208ENST00000455631 LY6DQ14210 128 aa24.04■■□□□ 1.44
PTPRA-208ENST00000455631 HS1BP3Q53T59 392 aa24.04■■□□□ 1.44
PTPRA-208ENST00000455631 FSCBQ5H9T9 825 aa24.04■■□□□ 1.44
PTPRA-208ENST00000455631 FOXD4L5Q5VV16 416 aaPredicted RBP24.04■■□□□ 1.44
PTPRA-208ENST00000455631 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP24.04■■□□□ 1.44
PTPRA-208ENST00000455631 FBXL13Q8NEE6 735 aa24.04■■□□□ 1.44
PTPRA-208ENST00000455631 KCNE4Q8WWG9 221 aa24.04■■□□□ 1.44
PTPRA-208ENST00000455631 FOXD4L4Q8WXT5 416 aaPredicted RBP24.04■■□□□ 1.44
PTPRA-208ENST00000455631 DDX50Q9BQ39 737 aaKnown RBP24.04■■□□□ 1.44
PTPRA-208ENST00000455631 RAB20Q9NX57 234 aa24.04■■□□□ 1.44
PTPRA-208ENST00000455631 SLCO3A1Q9UIG8 710 aa24.04■■□□□ 1.44
PTPRA-208ENST00000455631 ECT2LQ008S8 904 aa24.03■■□□□ 1.44
PTPRA-208ENST00000455631 ZNF211Q13398 564 aaPredicted RBP24.03■■□□□ 1.44
PTPRA-208ENST00000455631 ELAVL3Q14576 367 aaKnown RBP24.03■■□□□ 1.44
PTPRA-208ENST00000455631 STAT4Q14765 748 aa24.03■■□□□ 1.44
PTPRA-208ENST00000455631 NFIL3Q16649 462 aa24.03■■□□□ 1.44
PTPRA-208ENST00000455631 PKDCCQ504Y2 493 aa24.03■■□□□ 1.44
PTPRA-208ENST00000455631 IQCHQ86VS3 1027 aa24.03■■□□□ 1.44
PTPRA-208ENST00000455631 CFAP52Q8N1V2 620 aa24.03■■□□□ 1.44
PTPRA-208ENST00000455631 KCTD13Q8WZ19 329 aa24.03■■□□□ 1.44
PTPRA-208ENST00000455631 PTPRN2Q92932 1015 aa24.03■■□□□ 1.44
PTPRA-208ENST00000455631 RPL10LQ96L21 214 aaKnown RBP24.03■■□□□ 1.44
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms