RNA–Protein interactions for RNA: ENST00000455111.1

GPC1-206, Transcript of glypican 1, humanhuman

TSL 3

Gene GPC1, Length 841 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPC1-206ENST00000455111 IGSF8Q969P0 613 aa16.6■□□□□ 0.25
GPC1-206ENST00000455111 RPL10LQ96L21 214 aaKnown RBP16.6■□□□□ 0.25
GPC1-206ENST00000455111 SLC2A13Q96QE2 648 aa16.6■□□□□ 0.25
GPC1-206ENST00000455111 BTBD1Q9H0C5 482 aa16.6■□□□□ 0.25
GPC1-206ENST00000455111 NEUROG2Q9H2A3 272 aa16.6■□□□□ 0.25
GPC1-206ENST00000455111 ANKRD6Q9Y2G4 727 aa16.6■□□□□ 0.25
GPC1-206ENST00000455111 CELSR3Q9NYQ7 3312 aa16.6■□□□□ 0.25
GPC1-206ENST00000455111 NBEAQ8NFP9 2946 aa16.6■□□□□ 0.25
GPC1-206ENST00000455111 COL5A1P20908 1838 aaPredicted RBP16.59■□□□□ 0.25
GPC1-206ENST00000455111 ADAMTS20P59510 1910 aa16.59■□□□□ 0.25
GPC1-206ENST00000455111 A0A1W2PP55 124 aa16.59■□□□□ 0.25
GPC1-206ENST00000455111 TMEM8BA6NDV4 472 aa16.59■□□□□ 0.25
GPC1-206ENST00000455111 H0Y626 953 aa16.59■□□□□ 0.25
GPC1-206ENST00000455111 THAP12O43422 761 aa16.59■□□□□ 0.25
GPC1-206ENST00000455111 FSBPO95073 299 aa16.59■□□□□ 0.25
GPC1-206ENST00000455111 TRIM16O95361 564 aa16.59■□□□□ 0.25
GPC1-206ENST00000455111 GNA14O95837 355 aa16.59■□□□□ 0.25
GPC1-206ENST00000455111 DNTTP04053 509 aa16.59■□□□□ 0.25
GPC1-206ENST00000455111 CD27P26842 260 aa16.59■□□□□ 0.25
GPC1-206ENST00000455111 GGCXP38435 758 aa16.59■□□□□ 0.25
GPC1-206ENST00000455111 CTSKP43235 329 aa16.59■□□□□ 0.25
GPC1-206ENST00000455111 GALCP54803 685 aa16.59■□□□□ 0.25
GPC1-206ENST00000455111 CENPCQ03188 943 aa16.59■□□□□ 0.25
GPC1-206ENST00000455111 BECN1Q14457 450 aa16.59■□□□□ 0.25
GPC1-206ENST00000455111 ARHGAP44Q17R89 818 aa16.59■□□□□ 0.25
GPC1-206ENST00000455111 PRAMEF14Q5SWL7 426 aa16.59■□□□□ 0.25
GPC1-206ENST00000455111 PASD1Q8IV76 773 aa16.59■□□□□ 0.25
GPC1-206ENST00000455111 MMAAQ8IVH4 418 aaKnown RBP16.59■□□□□ 0.25
GPC1-206ENST00000455111 DEFB106AQ8N104 65 aa16.59■□□□□ 0.25
GPC1-206ENST00000455111 SHC3Q92529 594 aa16.59■□□□□ 0.25
GPC1-206ENST00000455111 SLC6A18Q96N87 628 aa16.59■□□□□ 0.25
GPC1-206ENST00000455111 FBRSQ9HAH7 460 aa16.59■□□□□ 0.25
GPC1-206ENST00000455111 POPDC2Q9HBU9 364 aa16.59■□□□□ 0.25
GPC1-206ENST00000455111 SUN2Q9UH99 717 aa16.59■□□□□ 0.25
GPC1-206ENST00000455111 RNF103O00237 685 aa16.58■□□□□ 0.24
GPC1-206ENST00000455111 PLK4O00444 970 aa16.58■□□□□ 0.24
GPC1-206ENST00000455111 GRAP2O75791 330 aa16.58■□□□□ 0.24
GPC1-206ENST00000455111 CER1O95813 267 aa16.58■□□□□ 0.24
GPC1-206ENST00000455111 ERBB2P04626 1255 aa16.58■□□□□ 0.24
GPC1-206ENST00000455111 TFE3P19532 575 aaPredicted RBP16.58■□□□□ 0.24
GPC1-206ENST00000455111 PON1P27169 355 aa16.58■□□□□ 0.24
GPC1-206ENST00000455111 DRD3P35462 400 aa16.58■□□□□ 0.24
GPC1-206ENST00000455111 CLCN1P35523 988 aa16.58■□□□□ 0.24
GPC1-206ENST00000455111 ACADSBP45954 432 aa16.58■□□□□ 0.24
GPC1-206ENST00000455111 GRIA4P48058 902 aa16.58■□□□□ 0.24
GPC1-206ENST00000455111 AFF3P51826 1226 aaKnown RBP16.58■□□□□ 0.24
GPC1-206ENST00000455111 YWHAZP63104 245 aaKnown RBP16.58■□□□□ 0.24
GPC1-206ENST00000455111 SCAPQ12770 1279 aa16.58■□□□□ 0.24
GPC1-206ENST00000455111 CETN1Q12798 172 aa16.58■□□□□ 0.24
GPC1-206ENST00000455111 HNRNPDQ14103 355 aaKnown RBP16.58■□□□□ 0.24
GPC1-206ENST00000455111 E2F5Q15329 346 aa16.58■□□□□ 0.24
GPC1-206ENST00000455111 CST6Q15828 149 aa16.58■□□□□ 0.24
GPC1-206ENST00000455111 CAMK4Q16566 473 aa16.58■□□□□ 0.24
GPC1-206ENST00000455111 KIAA0895LQ68EN5 471 aa16.58■□□□□ 0.24
GPC1-206ENST00000455111 NCEH1Q6PIU2 408 aa16.58■□□□□ 0.24
GPC1-206ENST00000455111 CCNI2Q6ZMN8 369 aaPredicted RBP16.58■□□□□ 0.24
GPC1-206ENST00000455111 FAM183BPQ6ZVS7 135 aa16.58■□□□□ 0.24
GPC1-206ENST00000455111 USP30Q70CQ3 517 aa16.58■□□□□ 0.24
GPC1-206ENST00000455111 C14orf80Q86SX3 495 aa16.58■□□□□ 0.24
GPC1-206ENST00000455111 CHSY1Q86X52 802 aa16.58■□□□□ 0.24
GPC1-206ENST00000455111 STK40Q8N2I9 435 aa16.58■□□□□ 0.24
GPC1-206ENST00000455111 KDM1BQ8NB78 822 aa16.58■□□□□ 0.24
GPC1-206ENST00000455111 SETD7Q8WTS6 366 aaKnown RBP16.58■□□□□ 0.24
GPC1-206ENST00000455111 FRS2Q8WU20 508 aa16.58■□□□□ 0.24
GPC1-206ENST00000455111 GOLGA1Q92805 767 aa16.58■□□□□ 0.24
GPC1-206ENST00000455111 FAM131CQ96AQ9 280 aa16.58■□□□□ 0.24
GPC1-206ENST00000455111 THAP9Q9H5L6 903 aa16.58■□□□□ 0.24
GPC1-206ENST00000455111 SGK2Q9HBY8 427 aa16.58■□□□□ 0.24
GPC1-206ENST00000455111 FBXL12Q9NXK8 326 aa16.58■□□□□ 0.24
GPC1-206ENST00000455111 KIAA1468Q9P260 1216 aa16.58■□□□□ 0.24
GPC1-206ENST00000455111 RWDD2AQ9UIY3 292 aa16.58■□□□□ 0.24
GPC1-206ENST00000455111 PCDHGB2Q9Y5G2 931 aa16.58■□□□□ 0.24
GPC1-206ENST00000455111 OR51B4Q9Y5P0 310 aa16.58■□□□□ 0.24
GPC1-206ENST00000455111 PKD1L2Q7Z442 2459 aa16.58■□□□□ 0.24
GPC1-206ENST00000455111 ITPR1Q14643 2758 aa16.58■□□□□ 0.24
GPC1-206ENST00000455111 KNL1Q8NG31 2342 aa16.57■□□□□ 0.24
GPC1-206ENST00000455111 A0A1W2PPC4 97 aa16.57■□□□□ 0.24
GPC1-206ENST00000455111 A0A1W2PR77 199 aa16.57■□□□□ 0.24
GPC1-206ENST00000455111 ASLP04424 464 aa16.57■□□□□ 0.24
GPC1-206ENST00000455111 PPP2CBP62714 309 aa16.57■□□□□ 0.24
GPC1-206ENST00000455111 PPP2CAP67775 309 aa16.57■□□□□ 0.24
GPC1-206ENST00000455111 IL9RQ01113 521 aa16.57■□□□□ 0.24
GPC1-206ENST00000455111 CDH18Q13634 790 aa16.57■□□□□ 0.24
GPC1-206ENST00000455111 PTPN20Q4JDL3 420 aa16.57■□□□□ 0.24
GPC1-206ENST00000455111 FBXL22Q6P050 247 aa16.57■□□□□ 0.24
GPC1-206ENST00000455111 OLFML1Q6UWY5 402 aa16.57■□□□□ 0.24
GPC1-206ENST00000455111 CCAR2Q8N163 923 aaKnown RBP16.57■□□□□ 0.24
GPC1-206ENST00000455111 C1orf131Q8NDD1 294 aaKnown RBP16.57■□□□□ 0.24
GPC1-206ENST00000455111 BTN2A3PQ96KV6 586 aa16.57■□□□□ 0.24
GPC1-206ENST00000455111 CAAP1Q9H8G2 361 aa16.57■□□□□ 0.24
GPC1-206ENST00000455111 PLCB1Q9NQ66 1216 aa16.57■□□□□ 0.24
GPC1-206ENST00000455111 APEX2Q9UBZ4 518 aa16.57■□□□□ 0.24
GPC1-206ENST00000455111 ADAMTS1Q9UHI8 967 aa16.57■□□□□ 0.24
GPC1-206ENST00000455111 SARDHQ9UL12 918 aa16.57■□□□□ 0.24
GPC1-206ENST00000455111 PCDHGC3Q9UN70 934 aa16.57■□□□□ 0.24
GPC1-206ENST00000455111 DOCK4Q8N1I0 1966 aa16.57■□□□□ 0.24
GPC1-206ENST00000455111 DSPP15924 2871 aaKnown RBP16.56■□□□□ 0.24
GPC1-206ENST00000455111 FAM170AA1A519 330 aa16.56■□□□□ 0.24
GPC1-206ENST00000455111 SART1O43290 800 aaKnown RBP16.56■□□□□ 0.24
GPC1-206ENST00000455111 SRPRAP08240 638 aaKnown RBP16.56■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms