RNA–Protein interactions for RNA: ENST00000453847.2

HMGN3P1-201, Transcript of high mobility group nucleosomal binding domain 3 pseudogene 1, humanhuman

BASIC

Gene HMGN3P1, Length 193 nt, Biotype processed pseudogene.

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN3P1-201ENST00000453847 EFNA5P52803 228 aa4.53□□□□□ -1.68
HMGN3P1-201ENST00000453847 RARSP54136 660 aaKnown RBP4.53□□□□□ -1.68
HMGN3P1-201ENST00000453847 RPL7AP62424 266 aaKnown RBP4.53□□□□□ -1.68
HMGN3P1-201ENST00000453847 SHC2P98077 582 aa4.53□□□□□ -1.68
HMGN3P1-201ENST00000453847 SLC25A3Q00325 362 aa4.53□□□□□ -1.68
HMGN3P1-201ENST00000453847 B4GALNT1Q00973 533 aa4.53□□□□□ -1.68
HMGN3P1-201ENST00000453847 ITIH3Q06033 890 aa4.53□□□□□ -1.68
HMGN3P1-201ENST00000453847 CDC16Q13042 620 aa4.53□□□□□ -1.68
HMGN3P1-201ENST00000453847 STK4Q13043 487 aa4.53□□□□□ -1.68
HMGN3P1-201ENST00000453847 CHAF1BQ13112 559 aa4.53□□□□□ -1.68
HMGN3P1-201ENST00000453847 TP53BP2Q13625 1128 aa4.53□□□□□ -1.68
HMGN3P1-201ENST00000453847 CBFBQ13951 182 aa4.53□□□□□ -1.68
HMGN3P1-201ENST00000453847 AP5B1Q2VPB7 878 aa4.53□□□□□ -1.68
HMGN3P1-201ENST00000453847 RUNDC3AQ59EK9 446 aa4.53□□□□□ -1.68
HMGN3P1-201ENST00000453847 ZKSCAN2Q63HK3 967 aa4.53□□□□□ -1.68
HMGN3P1-201ENST00000453847 SLC30A6Q6NXT4 461 aa4.53□□□□□ -1.68
HMGN3P1-201ENST00000453847 Q6ZWC4 215 aa4.53□□□□□ -1.68
HMGN3P1-201ENST00000453847 RNF144BQ7Z419 303 aa4.53□□□□□ -1.68
HMGN3P1-201ENST00000453847 LAS2Q8IYD9 372 aa4.53□□□□□ -1.68
HMGN3P1-201ENST00000453847 ADGRF3Q8IZF5 1079 aa4.53□□□□□ -1.68
HMGN3P1-201ENST00000453847 BHLHE22Q8NFJ8 381 aaPredicted RBP4.53□□□□□ -1.68
HMGN3P1-201ENST00000453847 TNIP2Q8NFZ5 429 aa4.53□□□□□ -1.68
HMGN3P1-201ENST00000453847 TBC1D5Q92609 795 aa4.53□□□□□ -1.68
HMGN3P1-201ENST00000453847 CALML4Q96GE6 196 aa4.53□□□□□ -1.68
HMGN3P1-201ENST00000453847 C5orf34Q96MH7 638 aa4.53□□□□□ -1.68
HMGN3P1-201ENST00000453847 SNX18Q96RF0 628 aa4.53□□□□□ -1.68
HMGN3P1-201ENST00000453847 RSPH9Q9H1X1 276 aaPredicted RBP4.53□□□□□ -1.68
HMGN3P1-201ENST00000453847 ERVK-5Q9HDB9 667 aa4.53□□□□□ -1.68
HMGN3P1-201ENST00000453847 PDE7BQ9NP56 450 aa4.53□□□□□ -1.68
HMGN3P1-201ENST00000453847 MRGBPQ9NV56 204 aa4.53□□□□□ -1.68
HMGN3P1-201ENST00000453847 ZNF711Q9Y462 761 aa4.53□□□□□ -1.68
HMGN3P1-201ENST00000453847 KCNE2Q9Y6J6 123 aa4.53□□□□□ -1.68
HMGN3P1-201ENST00000453847 CAPN7Q9Y6W3 813 aa4.53□□□□□ -1.68
HMGN3P1-201ENST00000453847 ZNF536O15090 1300 aa4.52□□□□□ -1.69
HMGN3P1-201ENST00000453847 FAM237BA0A1B0GVD1 139 aa4.52□□□□□ -1.69
HMGN3P1-201ENST00000453847 A0A1W2PQ09 198 aa4.52□□□□□ -1.69
HMGN3P1-201ENST00000453847 TSPY2A6NKD2 308 aa4.52□□□□□ -1.69
HMGN3P1-201ENST00000453847 TMEM200CA6NKL6 621 aa4.52□□□□□ -1.69
HMGN3P1-201ENST00000453847 C3orf70A6NLC5 250 aaPredicted RBP4.52□□□□□ -1.69
HMGN3P1-201ENST00000453847 C16orf96A6NNT2 1141 aa4.52□□□□□ -1.69
HMGN3P1-201ENST00000453847 TMEM232C9JQI7 657 aa4.52□□□□□ -1.69
HMGN3P1-201ENST00000453847 CES2O00748 559 aa4.52□□□□□ -1.69
HMGN3P1-201ENST00000453847 UBE2CO00762 179 aa4.52□□□□□ -1.69
HMGN3P1-201ENST00000453847 PRYO14603 147 aa4.52□□□□□ -1.69
HMGN3P1-201ENST00000453847 ADAM20O43506 726 aa4.52□□□□□ -1.69
HMGN3P1-201ENST00000453847 TJP3O95049 919 aa4.52□□□□□ -1.69
HMGN3P1-201ENST00000453847 C1RP00736 705 aa4.52□□□□□ -1.69
HMGN3P1-201ENST00000453847 ALDOAP04075 364 aaKnown RBP4.52□□□□□ -1.69
HMGN3P1-201ENST00000453847 TSPY3P0CV98 308 aa4.52□□□□□ -1.69
HMGN3P1-201ENST00000453847 TSPY8P0CW00 308 aa4.52□□□□□ -1.69
HMGN3P1-201ENST00000453847 VDRP11473 427 aa4.52□□□□□ -1.69
HMGN3P1-201ENST00000453847 ZNF37AP17032 561 aaPredicted RBP4.52□□□□□ -1.69
HMGN3P1-201ENST00000453847 DDX6P26196 483 aaKnown RBP eCLIP4.52□□□□□ -1.69
HMGN3P1-201ENST00000453847 DUSP1P28562 367 aa4.52□□□□□ -1.69
HMGN3P1-201ENST00000453847 BMPR1AP36894 532 aa4.52□□□□□ -1.69
HMGN3P1-201ENST00000453847 PSMB10P40306 273 aa4.52□□□□□ -1.69
HMGN3P1-201ENST00000453847 STAT6P42226 847 aa4.52□□□□□ -1.69
HMGN3P1-201ENST00000453847 JAK3P52333 1124 aa4.52□□□□□ -1.69
HMGN3P1-201ENST00000453847 SLC37A1P57057 533 aa4.52□□□□□ -1.69
HMGN3P1-201ENST00000453847 NXPH1P58417 271 aa4.52□□□□□ -1.69
HMGN3P1-201ENST00000453847 EFNB1P98172 346 aa4.52□□□□□ -1.69
HMGN3P1-201ENST00000453847 TSPY1Q01534 308 aa4.52□□□□□ -1.69
HMGN3P1-201ENST00000453847 ABHD18Q0P651 414 aa4.52□□□□□ -1.69
HMGN3P1-201ENST00000453847 LMAN2Q12907 356 aa4.52□□□□□ -1.69
HMGN3P1-201ENST00000453847 EPS8Q12929 822 aa4.52□□□□□ -1.69
HMGN3P1-201ENST00000453847 ALKBH1Q13686 389 aaKnown RBP4.52□□□□□ -1.69
HMGN3P1-201ENST00000453847 BYSLQ13895 437 aaKnown RBP4.52□□□□□ -1.69
HMGN3P1-201ENST00000453847 SLC18A3Q16572 532 aa4.52□□□□□ -1.69
HMGN3P1-201ENST00000453847 SPDYE7PQ495Y7 208 aa4.52□□□□□ -1.69
HMGN3P1-201ENST00000453847 ZNF618Q5T7W0 954 aa4.52□□□□□ -1.69
HMGN3P1-201ENST00000453847 MCTP1Q6DN14 999 aa4.52□□□□□ -1.69
HMGN3P1-201ENST00000453847 GJB7Q6PEY0 223 aa4.52□□□□□ -1.69
HMGN3P1-201ENST00000453847 SLC39A5Q6ZMH5 540 aa4.52□□□□□ -1.69
HMGN3P1-201ENST00000453847 RTL10Q7L3V2 364 aa4.52□□□□□ -1.69
HMGN3P1-201ENST00000453847 NBPF11Q86T75 865 aa4.52□□□□□ -1.69
HMGN3P1-201ENST00000453847 PRPF39Q86UA1 669 aaKnown RBP4.52□□□□□ -1.69
HMGN3P1-201ENST00000453847 CIR1Q86X95 450 aaPredicted RBP4.52□□□□□ -1.69
HMGN3P1-201ENST00000453847 BRSK2Q8IWQ3 736 aa4.52□□□□□ -1.69
HMGN3P1-201ENST00000453847 ULK2Q8IYT8 1036 aa4.52□□□□□ -1.69
HMGN3P1-201ENST00000453847 VPS52Q8N1B4 723 aa4.52□□□□□ -1.69
HMGN3P1-201ENST00000453847 C12orf76Q8N812 135 aaPredicted RBP4.52□□□□□ -1.69
HMGN3P1-201ENST00000453847 FRMD1Q8N878 549 aa4.52□□□□□ -1.69
HMGN3P1-201ENST00000453847 SETD9Q8NE22 299 aa4.52□□□□□ -1.69
HMGN3P1-201ENST00000453847 FEZF2Q8TBJ5 459 aa4.52□□□□□ -1.69
HMGN3P1-201ENST00000453847 CNOT9Q92600 299 aaKnown RBP4.52□□□□□ -1.69
HMGN3P1-201ENST00000453847 ATP2A3Q93084 1043 aa4.52□□□□□ -1.69
HMGN3P1-201ENST00000453847 PTCD3Q96EY7 689 aaKnown RBP4.52□□□□□ -1.69
HMGN3P1-201ENST00000453847 KLHL15Q96M94 604 aa4.52□□□□□ -1.69
HMGN3P1-201ENST00000453847 BAG1Q99933 345 aaPredicted RBP4.52□□□□□ -1.69
HMGN3P1-201ENST00000453847 THAP7Q9BT49 309 aaPredicted RBP4.52□□□□□ -1.69
HMGN3P1-201ENST00000453847 HTATIP2Q9BUP3 242 aa4.52□□□□□ -1.69
HMGN3P1-201ENST00000453847 SLC32A1Q9H598 525 aa4.52□□□□□ -1.69
HMGN3P1-201ENST00000453847 POLR1BQ9H9Y6 1135 aa4.52□□□□□ -1.69
HMGN3P1-201ENST00000453847 KLC4Q9NSK0 619 aa4.52□□□□□ -1.69
HMGN3P1-201ENST00000453847 DLL3Q9NYJ7 618 aa4.52□□□□□ -1.69
HMGN3P1-201ENST00000453847 FZD4Q9ULV1 537 aa4.52□□□□□ -1.69
HMGN3P1-201ENST00000453847 SH2B3Q9UQQ2 575 aa4.52□□□□□ -1.69
HMGN3P1-201ENST00000453847 OSGIN2Q9Y236 505 aa4.52□□□□□ -1.69
HMGN3P1-201ENST00000453847 BTBD18B2RXH4 712 aa4.51□□□□□ -1.69
HMGN3P1-201ENST00000453847 LIASO43766 372 aa4.51□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 9.6 ms