RNA–Protein interactions for RNA: ENST00000453259.2

LYSMD3-202, Transcript of LysM domain containing 3, humanhuman

TSL 3

Gene LYSMD3, Length 553 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD3-202ENST00000453259 ITPKBP27987 946 aa14.81□□□□□ -0.04
LYSMD3-202ENST00000453259 SLC8A1P32418 973 aa14.81□□□□□ -0.04
LYSMD3-202ENST00000453259 ADPRHP54922 357 aa14.81□□□□□ -0.04
LYSMD3-202ENST00000453259 UCNP55089 124 aa14.81□□□□□ -0.04
LYSMD3-202ENST00000453259 TBX4P57082 545 aa14.81□□□□□ -0.04
LYSMD3-202ENST00000453259 CUL2Q13617 745 aa14.81□□□□□ -0.04
LYSMD3-202ENST00000453259 SLC12A1Q13621 1099 aa14.81□□□□□ -0.04
LYSMD3-202ENST00000453259 KCNJ12Q14500 433 aa14.81□□□□□ -0.04
LYSMD3-202ENST00000453259 PKDCCQ504Y2 493 aa14.81□□□□□ -0.04
LYSMD3-202ENST00000453259 RNF219Q5W0B1 726 aaPredicted RBP14.81□□□□□ -0.04
LYSMD3-202ENST00000453259 LCLAT1Q6UWP7 414 aa14.81□□□□□ -0.04
LYSMD3-202ENST00000453259 EID2Q8N6I1 236 aa14.81□□□□□ -0.04
LYSMD3-202ENST00000453259 DCBLD1Q8N8Z6 715 aa14.81□□□□□ -0.04
LYSMD3-202ENST00000453259 WFDC5Q8TCV5 224 aa14.81□□□□□ -0.04
LYSMD3-202ENST00000453259 TATDN2Q93075 761 aa14.81□□□□□ -0.04
LYSMD3-202ENST00000453259 FAM131CQ96AQ9 280 aa14.81□□□□□ -0.04
LYSMD3-202ENST00000453259 CCDC34Q96HJ3 373 aa14.81□□□□□ -0.04
LYSMD3-202ENST00000453259 MRGPRX3Q96LB0 322 aa14.81□□□□□ -0.04
LYSMD3-202ENST00000453259 SERPINB11Q96P15 392 aa14.81□□□□□ -0.04
LYSMD3-202ENST00000453259 NEUROG2Q9H2A3 272 aa14.81□□□□□ -0.04
LYSMD3-202ENST00000453259 SERGEFQ9UGK8 458 aa14.81□□□□□ -0.04
LYSMD3-202ENST00000453259 CLCA2Q9UQC9 943 aa14.81□□□□□ -0.04
LYSMD3-202ENST00000453259 ERVW-1Q9UQF0 538 aa14.81□□□□□ -0.04
LYSMD3-202ENST00000453259 HPSEQ9Y251 543 aa14.81□□□□□ -0.04
LYSMD3-202ENST00000453259 TLR6Q9Y2C9 796 aa14.81□□□□□ -0.04
LYSMD3-202ENST00000453259 PTPRQQ9UMZ3 2332 aa14.8□□□□□ -0.04
LYSMD3-202ENST00000453259 ERVH48-1M5A8F1 160 aa14.8□□□□□ -0.04
LYSMD3-202ENST00000453259 TULP2O00295 520 aa14.8□□□□□ -0.04
LYSMD3-202ENST00000453259 CETN3O15182 167 aa14.8□□□□□ -0.04
LYSMD3-202ENST00000453259 LTFP02788 710 aa14.8□□□□□ -0.04
LYSMD3-202ENST00000453259 CD19P15391 556 aa14.8□□□□□ -0.04
LYSMD3-202ENST00000453259 SLC6A4P31645 630 aa14.8□□□□□ -0.04
LYSMD3-202ENST00000453259 NNMTP40261 264 aa14.8□□□□□ -0.04
LYSMD3-202ENST00000453259 VASPP50552 380 aaPredicted RBP14.8□□□□□ -0.04
LYSMD3-202ENST00000453259 SGSHP51688 502 aa14.8□□□□□ -0.04
LYSMD3-202ENST00000453259 ECT2LQ008S8 904 aa14.8□□□□□ -0.04
LYSMD3-202ENST00000453259 SULT2A1Q06520 285 aa14.8□□□□□ -0.04
LYSMD3-202ENST00000453259 DNAJC3Q13217 504 aa14.8□□□□□ -0.04
LYSMD3-202ENST00000453259 TBC1D25Q3MII6 688 aa14.8□□□□□ -0.04
LYSMD3-202ENST00000453259 PITRM1Q5JRX3 1037 aa14.8□□□□□ -0.04
LYSMD3-202ENST00000453259 RFWD3Q6PCD5 774 aa14.8□□□□□ -0.04
LYSMD3-202ENST00000453259 BEND5Q7L4P6 421 aa14.8□□□□□ -0.04
LYSMD3-202ENST00000453259 DSG4Q86SJ6 1040 aa14.8□□□□□ -0.04
LYSMD3-202ENST00000453259 ZNF605Q86T29 641 aa14.8□□□□□ -0.04
LYSMD3-202ENST00000453259 MMAAQ8IVH4 418 aaKnown RBP14.8□□□□□ -0.04
LYSMD3-202ENST00000453259 DHX40Q8IX18 779 aaKnown RBP14.8□□□□□ -0.04
LYSMD3-202ENST00000453259 HSFY1Q96LI6 401 aa14.8□□□□□ -0.04
LYSMD3-202ENST00000453259 EBF2Q9HAK2 575 aa14.8□□□□□ -0.04
LYSMD3-202ENST00000453259 FAM237AA0A1B0GTK4 181 aa14.79□□□□□ -0.04
LYSMD3-202ENST00000453259 RIOK3O14730 519 aaKnown RBP14.79□□□□□ -0.04
LYSMD3-202ENST00000453259 SLC16A3O15427 465 aaKnown RBP14.79□□□□□ -0.04
LYSMD3-202ENST00000453259 RNGTTO60942 597 aaKnown RBP14.79□□□□□ -0.04
LYSMD3-202ENST00000453259 LUC7L3O95232 432 aaKnown RBP14.79□□□□□ -0.04
LYSMD3-202ENST00000453259 PLA2G2AP14555 144 aa14.79□□□□□ -0.04
LYSMD3-202ENST00000453259 GLDCP23378 1020 aa14.79□□□□□ -0.04
LYSMD3-202ENST00000453259 OXCT1P55809 520 aa14.79□□□□□ -0.04
LYSMD3-202ENST00000453259 TLE3Q04726 772 aa14.79□□□□□ -0.04
LYSMD3-202ENST00000453259 DPYDQ12882 1025 aa14.79□□□□□ -0.04
LYSMD3-202ENST00000453259 HS1BP3Q53T59 392 aa14.79□□□□□ -0.04
LYSMD3-202ENST00000453259 MS4A13Q5J8X5 152 aa14.79□□□□□ -0.04
LYSMD3-202ENST00000453259 KANSL1Q7Z3B3 1105 aa14.79□□□□□ -0.04
LYSMD3-202ENST00000453259 PRPF39Q86UA1 669 aaKnown RBP14.79□□□□□ -0.04
LYSMD3-202ENST00000453259 LSMEM2Q8N112 164 aa14.79□□□□□ -0.04
LYSMD3-202ENST00000453259 OR14C36Q8NHC7 312 aa14.79□□□□□ -0.04
LYSMD3-202ENST00000453259 SHROOM3Q8TF72 1996 aa14.79□□□□□ -0.04
LYSMD3-202ENST00000453259 SLC35F5Q8WV83 523 aa14.79□□□□□ -0.04
LYSMD3-202ENST00000453259 NDRG1Q92597 394 aaKnown RBP14.79□□□□□ -0.04
LYSMD3-202ENST00000453259 PRICKLE1Q96MT3 831 aaPredicted RBP14.79□□□□□ -0.04
LYSMD3-202ENST00000453259 SPAG5Q96R06 1193 aa14.79□□□□□ -0.04
LYSMD3-202ENST00000453259 PPP1R9BQ96SB3 815 aa14.79□□□□□ -0.04
LYSMD3-202ENST00000453259 INTS6Q9UL03 887 aaKnown RBP14.79□□□□□ -0.04
LYSMD3-202ENST00000453259 BRINP1O60477 761 aa14.78□□□□□ -0.04
LYSMD3-202ENST00000453259 MZF1P28698 734 aaPredicted RBP14.78□□□□□ -0.04
LYSMD3-202ENST00000453259 SYKP43405 635 aa14.78□□□□□ -0.04
LYSMD3-202ENST00000453259 RHDQ02161 417 aa14.78□□□□□ -0.04
LYSMD3-202ENST00000453259 MTA1Q13330 715 aa14.78□□□□□ -0.04
LYSMD3-202ENST00000453259 ZNF211Q13398 564 aaPredicted RBP14.78□□□□□ -0.04
LYSMD3-202ENST00000453259 PROX2Q3B8N5 592 aa14.78□□□□□ -0.04
LYSMD3-202ENST00000453259 TTC39BQ5VTQ0 682 aaPredicted RBP14.78□□□□□ -0.04
LYSMD3-202ENST00000453259 FAM46CQ5VWP2 391 aa14.78□□□□□ -0.04
LYSMD3-202ENST00000453259 TRIM69Q86WT6 500 aa14.78□□□□□ -0.04
LYSMD3-202ENST00000453259 ZNF843Q8N446 348 aa14.78□□□□□ -0.04
LYSMD3-202ENST00000453259 AADATQ8N5Z0 425 aa14.78□□□□□ -0.04
LYSMD3-202ENST00000453259 ZNF248Q8NDW4 579 aa14.78□□□□□ -0.04
LYSMD3-202ENST00000453259 SNX21Q969T3 373 aa14.78□□□□□ -0.04
LYSMD3-202ENST00000453259 ZNF578Q96N58 590 aaPredicted RBP14.78□□□□□ -0.04
LYSMD3-202ENST00000453259 FAM129BQ96TA1 746 aa14.78□□□□□ -0.04
LYSMD3-202ENST00000453259 STIM2Q9P246 746 aa14.78□□□□□ -0.04
LYSMD3-202ENST00000453259 CEP83Q9Y592 693 aa14.78□□□□□ -0.04
LYSMD3-202ENST00000453259 RAI2Q9Y5P3 530 aa14.78□□□□□ -0.04
LYSMD3-202ENST00000453259 CFAP46Q8IYW2 2715 aa14.77□□□□□ -0.04
LYSMD3-202ENST00000453259 TBC1D3DA0A087WVF3 549 aa14.77□□□□□ -0.05
LYSMD3-202ENST00000453259 TBC1D3IA0A087WXS9 549 aa14.77□□□□□ -0.05
LYSMD3-202ENST00000453259 TBC1D3EA0A087X179 549 aa14.77□□□□□ -0.05
LYSMD3-202ENST00000453259 TBC1D3KA0A087X1G2 549 aa14.77□□□□□ -0.05
LYSMD3-202ENST00000453259 A0A1B0GVL5 298 aa14.77□□□□□ -0.05
LYSMD3-202ENST00000453259 TBC1D3FA6NER0 549 aaPredicted RBP14.77□□□□□ -0.05
LYSMD3-202ENST00000453259 TBC1D3LB9A6J9 549 aa14.77□□□□□ -0.05
LYSMD3-202ENST00000453259 ALOX15BO15296 676 aa14.77□□□□□ -0.05
LYSMD3-202ENST00000453259 DXOO77932 396 aaKnown RBP14.77□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms