RNA–Protein interactions for RNA: ENST00000452441.5

DDR1-239, Transcript of discoidin domain receptor tyrosine kinase 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene DDR1, Length 3,857 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1-239ENST00000452441 RGS2P41220 211 aa11.44□□□□□ -0.58
DDR1-239ENST00000452441 FLT3LGP49771 235 aa11.44□□□□□ -0.58
DDR1-239ENST00000452441 NAGLUP54802 743 aa11.44□□□□□ -0.58
DDR1-239ENST00000452441 CDK16Q00536 496 aa11.44□□□□□ -0.58
DDR1-239ENST00000452441 SNX17Q15036 470 aa11.44□□□□□ -0.58
DDR1-239ENST00000452441 WASHC2DQ5SRD0 308 aa11.44□□□□□ -0.58
DDR1-239ENST00000452441 RNF220Q5VTB9 566 aa11.44□□□□□ -0.58
DDR1-239ENST00000452441 SYPL2Q5VXT5 272 aa11.44□□□□□ -0.58
DDR1-239ENST00000452441 IYDQ6PHW0 289 aa11.44□□□□□ -0.58
DDR1-239ENST00000452441 SPATA2LQ8IUW3 424 aaPredicted RBP11.44□□□□□ -0.58
DDR1-239ENST00000452441 NAT8LQ8N9F0 302 aa11.44□□□□□ -0.58
DDR1-239ENST00000452441 FAM156AQ8NDB6 213 aa11.44□□□□□ -0.58
DDR1-239ENST00000452441 SPDYE1Q8NFV5 336 aaPredicted RBP11.44□□□□□ -0.58
DDR1-239ENST00000452441 P2RY11Q96G91 374 aa11.44□□□□□ -0.58
DDR1-239ENST00000452441 ELMO2Q96JJ3 720 aa11.44□□□□□ -0.58
DDR1-239ENST00000452441 NMRK1Q9NWW6 199 aa11.44□□□□□ -0.58
DDR1-239ENST00000452441 TAS2R1Q9NYW7 299 aa11.44□□□□□ -0.58
DDR1-239ENST00000452441 PSAT1Q9Y617 370 aa11.44□□□□□ -0.58
DDR1-239ENST00000452441 NCF1BA6NI72 391 aaPredicted RBP11.44□□□□□ -0.58
DDR1-239ENST00000452441 NCF1CA8MVU1 366 aaPredicted RBP11.44□□□□□ -0.58
DDR1-239ENST00000452441 ITM2AO43736 263 aa11.44□□□□□ -0.58
DDR1-239ENST00000452441 SNAI1O95863 264 aaPredicted RBP11.44□□□□□ -0.58
DDR1-239ENST00000452441 NCF1P14598 390 aaPredicted RBP11.44□□□□□ -0.58
DDR1-239ENST00000452441 MX2P20592 715 aa11.44□□□□□ -0.58
DDR1-239ENST00000452441 ATP6V1C1P21283 382 aa11.44□□□□□ -0.58
DDR1-239ENST00000452441 PRAMEP78395 509 aa11.44□□□□□ -0.58
DDR1-239ENST00000452441 LPCAT4Q643R3 524 aa11.44□□□□□ -0.58
DDR1-239ENST00000452441 HFE2Q6ZVN8 426 aa11.44□□□□□ -0.58
DDR1-239ENST00000452441 ZBTB46Q86UZ6 589 aa11.44□□□□□ -0.58
DDR1-239ENST00000452441 TRIM42Q8IWZ5 723 aa11.44□□□□□ -0.58
DDR1-239ENST00000452441 THEM5Q8N1Q8 247 aa11.44□□□□□ -0.58
DDR1-239ENST00000452441 TTC39CQ8N584 583 aa11.44□□□□□ -0.58
DDR1-239ENST00000452441 SPATA22Q8NHS9 363 aa11.44□□□□□ -0.58
DDR1-239ENST00000452441 NKD2Q969F2 451 aaPredicted RBP11.44□□□□□ -0.58
DDR1-239ENST00000452441 NDNQ99608 321 aa11.44□□□□□ -0.58
DDR1-239ENST00000452441 TRIM4Q9C037 500 aa11.44□□□□□ -0.58
DDR1-239ENST00000452441 TSPYL2Q9H2G4 693 aaPredicted RBP11.44□□□□□ -0.58
DDR1-239ENST00000452441 CHRAC1Q9NRG0 131 aa11.44□□□□□ -0.58
DDR1-239ENST00000452441 RUVBL2Q9Y230 463 aaKnown RBP11.44□□□□□ -0.58
DDR1-239ENST00000452441 PPP1R12AO14974 1030 aaPredicted RBP11.43□□□□□ -0.58
DDR1-239ENST00000452441 SORBS2O94875 1100 aaKnown RBP11.43□□□□□ -0.58
DDR1-239ENST00000452441 LINGO3P0C6S8 592 aa11.43□□□□□ -0.58
DDR1-239ENST00000452441 NOMO1Q15155 1222 aa11.43□□□□□ -0.58
DDR1-239ENST00000452441 KIF19Q2TAC6 998 aa11.43□□□□□ -0.58
DDR1-239ENST00000452441 ST3GAL5Q9UNP4 418 aa11.43□□□□□ -0.58
DDR1-239ENST00000452441 IPPQ9Y573 584 aa11.43□□□□□ -0.58
DDR1-239ENST00000452441 EVPLQ92817 2033 aa11.43□□□□□ -0.58
DDR1-239ENST00000452441 CNMDO75829 334 aa11.43□□□□□ -0.58
DDR1-239ENST00000452441 FGFR3P22607 806 aa11.43□□□□□ -0.58
DDR1-239ENST00000452441 IGFBP6P24592 240 aaPredicted RBP11.43□□□□□ -0.58
DDR1-239ENST00000452441 TUBP50607 506 aa11.43□□□□□ -0.58
DDR1-239ENST00000452441 LARP7Q4G0J3 582 aaKnown RBP eCLIP11.43□□□□□ -0.58
DDR1-239ENST00000452441 C9orf57Q5W0N0 161 aa11.43□□□□□ -0.58
DDR1-239ENST00000452441 TRIM67Q6ZTA4 783 aa11.43□□□□□ -0.58
DDR1-239ENST00000452441 OTOP3Q7RTS5 596 aa11.43□□□□□ -0.58
DDR1-239ENST00000452441 LCA5Q86VQ0 697 aa11.43□□□□□ -0.58
DDR1-239ENST00000452441 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP11.43□□□□□ -0.58
DDR1-239ENST00000452441 XPNPEP3Q9NQH7 507 aa11.43□□□□□ -0.58
DDR1-239ENST00000452441 LRRC42Q9Y546 428 aa11.43□□□□□ -0.58
DDR1-239ENST00000452441 NRCAMQ92823 1304 aa11.43□□□□□ -0.58
DDR1-239ENST00000452441 A0A096LPK6 155 aa11.43□□□□□ -0.58
DDR1-239ENST00000452441 C2CD4BA6NLJ0 364 aa11.43□□□□□ -0.58
DDR1-239ENST00000452441 ZBBXA8MT70 800 aa11.43□□□□□ -0.58
DDR1-239ENST00000452441 CLGNO14967 610 aa11.43□□□□□ -0.58
DDR1-239ENST00000452441 GSC2O15499 205 aa11.43□□□□□ -0.58
DDR1-239ENST00000452441 MSI1O43347 362 aaKnown RBP11.43□□□□□ -0.58
DDR1-239ENST00000452441 AMHP03971 560 aa11.43□□□□□ -0.58
DDR1-239ENST00000452441 DARSP14868 501 aaKnown RBP11.43□□□□□ -0.58
DDR1-239ENST00000452441 AP2B1P63010 937 aa11.43□□□□□ -0.58
DDR1-239ENST00000452441 IRX1P78414 480 aaPredicted RBP11.43□□□□□ -0.58
DDR1-239ENST00000452441 ACSBG2Q5FVE4 666 aa11.43□□□□□ -0.58
DDR1-239ENST00000452441 B3GALNT2Q8NCR0 500 aa11.43□□□□□ -0.58
DDR1-239ENST00000452441 CSPG4P5Q96PW8 444 aa11.43□□□□□ -0.58
DDR1-239ENST00000452441 KATNAL1Q9BW62 490 aa11.43□□□□□ -0.58
DDR1-239ENST00000452441 SFMBT1Q9UHJ3 866 aa11.43□□□□□ -0.58
DDR1-239ENST00000452441 PQBP1O60828 265 aaKnown RBP11.42□□□□□ -0.58
DDR1-239ENST00000452441 MT-CYBP00156 380 aaPredicted RBP11.42□□□□□ -0.58
DDR1-239ENST00000452441 CPA3P15088 417 aa11.42□□□□□ -0.58
DDR1-239ENST00000452441 PTPN1P18031 435 aaKnown RBP11.42□□□□□ -0.58
DDR1-239ENST00000452441 ERCC2P18074 760 aa11.42□□□□□ -0.58
DDR1-239ENST00000452441 VHLP40337 213 aa11.42□□□□□ -0.58
DDR1-239ENST00000452441 PPM1FP49593 454 aaPredicted RBP11.42□□□□□ -0.58
DDR1-239ENST00000452441 COG7P83436 770 aa11.42□□□□□ -0.58
DDR1-239ENST00000452441 MAP2K5Q13163 448 aa11.42□□□□□ -0.58
DDR1-239ENST00000452441 CSHL1Q14406 222 aa11.42□□□□□ -0.58
DDR1-239ENST00000452441 OLFML2BQ68BL8 750 aa11.42□□□□□ -0.58
DDR1-239ENST00000452441 ADGRD1Q6QNK2 874 aa11.42□□□□□ -0.58
DDR1-239ENST00000452441 DIS3LQ8TF46 1054 aaKnown RBP11.42□□□□□ -0.58
DDR1-239ENST00000452441 EPAS1Q99814 870 aa11.42□□□□□ -0.58
DDR1-239ENST00000452441 TKTL2Q9H0I9 626 aa11.42□□□□□ -0.58
DDR1-239ENST00000452441 SMPD4Q9NXE4 827 aa11.42□□□□□ -0.58
DDR1-239ENST00000452441 PIGRP01833 764 aa11.42□□□□□ -0.58
DDR1-239ENST00000452441 LMNAP02545 664 aaKnown RBP11.42□□□□□ -0.58
DDR1-239ENST00000452441 HNRNPLP14866 589 aaKnown RBP eCLIP11.42□□□□□ -0.582e-10■■■□□ 15.1
DDR1-239ENST00000452441 CALRP27797 417 aaKnown RBP11.42□□□□□ -0.58
DDR1-239ENST00000452441 CSE1LP55060 971 aaKnown RBP11.42□□□□□ -0.58
DDR1-239ENST00000452441 HDAC4P56524 1084 aa11.42□□□□□ -0.58
DDR1-239ENST00000452441 MRPS35P82673 323 aaKnown RBP11.42□□□□□ -0.58
DDR1-239ENST00000452441 DRICH1Q6PGQ1 229 aaPredicted RBP11.42□□□□□ -0.58
DDR1-239ENST00000452441 CYP2R1Q6VVX0 501 aa11.42□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms