RNA–Protein interactions for RNA: ENST00000452013.5

COL8A1-203, Transcript of collagen type VIII alpha 1 chain, humanhuman

TSL 2

Gene COL8A1, Length 659 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL8A1-203ENST00000452013 IMPACTQ9P2X3 320 aa9.15□□□□□ -0.94
COL8A1-203ENST00000452013 PPARGC1AQ9UBK2 798 aaKnown RBP9.15□□□□□ -0.94
COL8A1-203ENST00000452013 EBF1Q9UH73 591 aa9.15□□□□□ -0.94
COL8A1-203ENST00000452013 IP6K2Q9UHH9 426 aa9.15□□□□□ -0.94
COL8A1-203ENST00000452013 TBC1D30Q9Y2I9 924 aa9.15□□□□□ -0.94
COL8A1-203ENST00000452013 STON1Q9Y6Q2 735 aa9.15□□□□□ -0.94
COL8A1-203ENST00000452013 DOCK6Q96HP0 2047 aa9.15□□□□□ -0.94
COL8A1-203ENST00000452013 TECTAO75443 2155 aa9.14□□□□□ -0.95
COL8A1-203ENST00000452013 IGLV3-10A0A075B6K4 115 aa9.14□□□□□ -0.95
COL8A1-203ENST00000452013 EIF3CLB5ME19 914 aaKnown RBP9.14□□□□□ -0.95
COL8A1-203ENST00000452013 AXIN1O15169 862 aa9.14□□□□□ -0.95
COL8A1-203ENST00000452013 ATMINO43313 823 aaPredicted RBP9.14□□□□□ -0.95
COL8A1-203ENST00000452013 PRPSAP2O60256 369 aa9.14□□□□□ -0.95
COL8A1-203ENST00000452013 SRPRAP08240 638 aaKnown RBP9.14□□□□□ -0.95
COL8A1-203ENST00000452013 TMEM253P0C7T8 217 aa9.14□□□□□ -0.95
COL8A1-203ENST00000452013 TDGF1P13385 188 aa9.14□□□□□ -0.95
COL8A1-203ENST00000452013 HOXB2P14652 356 aa9.14□□□□□ -0.95
COL8A1-203ENST00000452013 L1CAMP32004 1257 aa9.14□□□□□ -0.95
COL8A1-203ENST00000452013 CYLC1P35663 651 aaPredicted RBP9.14□□□□□ -0.95
COL8A1-203ENST00000452013 NBL1P41271 181 aa9.14□□□□□ -0.95
COL8A1-203ENST00000452013 WASP42768 502 aa9.14□□□□□ -0.95
COL8A1-203ENST00000452013 MAGEA1P43355 309 aa9.14□□□□□ -0.95
COL8A1-203ENST00000452013 FNTBP49356 437 aa9.14□□□□□ -0.95
COL8A1-203ENST00000452013 KRT83P78385 493 aa9.14□□□□□ -0.95
COL8A1-203ENST00000452013 OGDHQ02218 1023 aa9.14□□□□□ -0.95
COL8A1-203ENST00000452013 NHLH1Q02575 133 aa9.14□□□□□ -0.95
COL8A1-203ENST00000452013 SCAPQ12770 1279 aa9.14□□□□□ -0.95
COL8A1-203ENST00000452013 SPA17Q15506 151 aa9.14□□□□□ -0.95
COL8A1-203ENST00000452013 USP39Q53GS9 565 aaKnown RBP9.14□□□□□ -0.95
COL8A1-203ENST00000452013 BOLA3Q53S33 107 aa9.14□□□□□ -0.95
COL8A1-203ENST00000452013 FSCBQ5H9T9 825 aa9.14□□□□□ -0.95
COL8A1-203ENST00000452013 PITRM1Q5JRX3 1037 aa9.14□□□□□ -0.95
COL8A1-203ENST00000452013 C6orf118Q5T5N4 469 aa9.14□□□□□ -0.95
COL8A1-203ENST00000452013 ERMARDQ5T6L9 678 aa9.14□□□□□ -0.95
COL8A1-203ENST00000452013 RNF219Q5W0B1 726 aaPredicted RBP9.14□□□□□ -0.95
COL8A1-203ENST00000452013 HEATR6Q6AI08 1181 aaKnown RBP9.14□□□□□ -0.95
COL8A1-203ENST00000452013 RWDD4Q6NW29 188 aaKnown RBP9.14□□□□□ -0.95
COL8A1-203ENST00000452013 SERPINA13PQ6UXR4 307 aa9.14□□□□□ -0.95
COL8A1-203ENST00000452013 SETD3Q86TU7 594 aaPredicted RBP9.14□□□□□ -0.95
COL8A1-203ENST00000452013 TMTC1Q8IUR5 882 aa9.14□□□□□ -0.95
COL8A1-203ENST00000452013 PSTKQ8IV42 348 aaKnown RBP9.14□□□□□ -0.95
COL8A1-203ENST00000452013 CCDC170Q8IYT3 715 aa9.14□□□□□ -0.95
COL8A1-203ENST00000452013 ZNF683Q8IZ20 524 aa9.14□□□□□ -0.95
COL8A1-203ENST00000452013 PGBD3Q8N328 593 aa9.14□□□□□ -0.95
COL8A1-203ENST00000452013 KDM1BQ8NB78 822 aa9.14□□□□□ -0.95
COL8A1-203ENST00000452013 LMLNQ96KR4 655 aa9.14□□□□□ -0.95
COL8A1-203ENST00000452013 PANX2Q96RD6 677 aa9.14□□□□□ -0.95
COL8A1-203ENST00000452013 ACOX2Q99424 681 aa9.14□□□□□ -0.95
COL8A1-203ENST00000452013 EIF3CQ99613 913 aaKnown RBP9.14□□□□□ -0.95
COL8A1-203ENST00000452013 GABRG3Q99928 467 aa9.14□□□□□ -0.95
COL8A1-203ENST00000452013 NUP85Q9BW27 656 aa9.14□□□□□ -0.95
COL8A1-203ENST00000452013 LUC7LQ9NQ29 371 aaKnown RBP9.14□□□□□ -0.95
COL8A1-203ENST00000452013 TMPRSS4Q9NRS4 437 aa9.14□□□□□ -0.95
COL8A1-203ENST00000452013 C2orf42Q9NWW7 574 aa9.14□□□□□ -0.95
COL8A1-203ENST00000452013 CACNA2D2Q9NY47 1150 aa9.14□□□□□ -0.95
COL8A1-203ENST00000452013 CTTNBP2NLQ9P2B4 639 aa9.14□□□□□ -0.95
COL8A1-203ENST00000452013 UVRAGQ9P2Y5 699 aa9.14□□□□□ -0.95
COL8A1-203ENST00000452013 INTUQ9ULD6 942 aa9.14□□□□□ -0.95
COL8A1-203ENST00000452013 FZD10Q9ULW2 581 aa9.14□□□□□ -0.95
COL8A1-203ENST00000452013 SNX10Q9Y5X0 201 aa9.14□□□□□ -0.95
COL8A1-203ENST00000452013 NUP210Q8TEM1 1887 aaPredicted RBP9.14□□□□□ -0.95
COL8A1-203ENST00000452013 ILVBLA1L0T0 632 aa9.13□□□□□ -0.95
COL8A1-203ENST00000452013 ANTXRLA6NF34 631 aa9.13□□□□□ -0.95
COL8A1-203ENST00000452013 WASH3PC4AMC7 463 aa9.13□□□□□ -0.95
COL8A1-203ENST00000452013 I6L893 689 aaPredicted RBP9.13□□□□□ -0.95
COL8A1-203ENST00000452013 LILRB5O75023 590 aa9.13□□□□□ -0.95
COL8A1-203ENST00000452013 ADAM23O75077 832 aa9.13□□□□□ -0.95
COL8A1-203ENST00000452013 CNTN5O94779 1100 aa9.13□□□□□ -0.95
COL8A1-203ENST00000452013 IPO7O95373 1038 aaKnown RBP9.13□□□□□ -0.95
COL8A1-203ENST00000452013 RHOCP08134 193 aa9.13□□□□□ -0.95
COL8A1-203ENST00000452013 RHOQP17081 205 aa9.13□□□□□ -0.95
COL8A1-203ENST00000452013 OR1E1P30953 314 aa9.13□□□□□ -0.95
COL8A1-203ENST00000452013 HTR7P34969 479 aa9.13□□□□□ -0.95
COL8A1-203ENST00000452013 PCK1P35558 622 aa9.13□□□□□ -0.95
COL8A1-203ENST00000452013 GGCXP38435 758 aa9.13□□□□□ -0.95
COL8A1-203ENST00000452013 CSKP41240 450 aa9.13□□□□□ -0.95
COL8A1-203ENST00000452013 IL12RB1P42701 662 aa9.13□□□□□ -0.95
COL8A1-203ENST00000452013 PXNP49023 591 aaPredicted RBP9.13□□□□□ -0.95
COL8A1-203ENST00000452013 ZNF135P52742 658 aaPredicted RBP9.13□□□□□ -0.95
COL8A1-203ENST00000452013 ECT2LQ008S8 904 aa9.13□□□□□ -0.95
COL8A1-203ENST00000452013 ENPP2Q13822 863 aa9.13□□□□□ -0.95
COL8A1-203ENST00000452013 ZNF234Q14588 700 aa9.13□□□□□ -0.95
COL8A1-203ENST00000452013 HADHQ16836 314 aaKnown RBP9.13□□□□□ -0.95
COL8A1-203ENST00000452013 PLEKHG6Q3KR16 790 aa9.13□□□□□ -0.95
COL8A1-203ENST00000452013 FNDC3BQ53EP0 1204 aaKnown RBP9.13□□□□□ -0.95
COL8A1-203ENST00000452013 RAB6CQ53S08 254 aa9.13□□□□□ -0.95
COL8A1-203ENST00000452013 TMEM215Q68D42 235 aa9.13□□□□□ -0.95
COL8A1-203ENST00000452013 TMEM92Q6UXU6 159 aa9.13□□□□□ -0.95
COL8A1-203ENST00000452013 ZNF783Q6ZMS7 281 aa9.13□□□□□ -0.95
COL8A1-203ENST00000452013 C11orf74Q86VG3 221 aa9.13□□□□□ -0.95
COL8A1-203ENST00000452013 CIR1Q86X95 450 aaPredicted RBP9.13□□□□□ -0.95
COL8A1-203ENST00000452013 RHOT2Q8IXI1 618 aa9.13□□□□□ -0.95
COL8A1-203ENST00000452013 CCDC185Q8N715 623 aa9.13□□□□□ -0.95
COL8A1-203ENST00000452013 WFDC5Q8TCV5 224 aa9.13□□□□□ -0.95
COL8A1-203ENST00000452013 NKD2Q969F2 451 aaPredicted RBP9.13□□□□□ -0.95
COL8A1-203ENST00000452013 TBC1D31Q96DN5 1066 aa9.13□□□□□ -0.95
COL8A1-203ENST00000452013 HHIPQ96QV1 700 aa9.13□□□□□ -0.95
COL8A1-203ENST00000452013 EPAS1Q99814 870 aa9.13□□□□□ -0.95
COL8A1-203ENST00000452013 FEM1AQ9BSK4 669 aa9.13□□□□□ -0.95
COL8A1-203ENST00000452013 RAB6CQ9H0N0 254 aa9.13□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms