RNA–Protein interactions for RNA: ENST00000449879.5

RAB11FIP3-204, Transcript of RAB11 family interacting protein 3, humanhuman

TSL 3

Gene RAB11FIP3, Length 580 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB11FIP3-204ENST00000449879 KIAA1522Q9P206 1035 aaPredicted RBP17.15■□□□□ 0.34
RAB11FIP3-204ENST00000449879 SLCO3A1Q9UIG8 710 aa17.15■□□□□ 0.34
RAB11FIP3-204ENST00000449879 SCML1Q9UN30 329 aa17.15■□□□□ 0.34
RAB11FIP3-204ENST00000449879 GOLGA4Q13439 2230 aaKnown RBP17.15■□□□□ 0.34
RAB11FIP3-204ENST00000449879 MID1O15344 667 aa17.14■□□□□ 0.33
RAB11FIP3-204ENST00000449879 SLC9A1P19634 815 aa17.14■□□□□ 0.33
RAB11FIP3-204ENST00000449879 GRIA4P48058 902 aa17.14■□□□□ 0.33
RAB11FIP3-204ENST00000449879 NUMBP49757 651 aa17.14■□□□□ 0.33
RAB11FIP3-204ENST00000449879 PITX1P78337 314 aaPredicted RBP17.14■□□□□ 0.33
RAB11FIP3-204ENST00000449879 ECT2LQ008S8 904 aa17.14■□□□□ 0.33
RAB11FIP3-204ENST00000449879 APBA1Q02410 837 aa17.14■□□□□ 0.33
RAB11FIP3-204ENST00000449879 SUZ12Q15022 739 aaKnown RBP17.14■□□□□ 0.33
RAB11FIP3-204ENST00000449879 MEA1Q16626 185 aa17.14■□□□□ 0.33
RAB11FIP3-204ENST00000449879 CCDC183Q5T5S1 534 aa17.14■□□□□ 0.33
RAB11FIP3-204ENST00000449879 C9orf64Q5T6V5 341 aa17.14■□□□□ 0.33
RAB11FIP3-204ENST00000449879 TRIM65Q6PJ69 517 aa17.14■□□□□ 0.33
RAB11FIP3-204ENST00000449879 USP30Q70CQ3 517 aa17.14■□□□□ 0.33
RAB11FIP3-204ENST00000449879 ADAT2Q7Z6V5 191 aaKnown RBP17.14■□□□□ 0.33
RAB11FIP3-204ENST00000449879 GLRX5Q86SX6 157 aa17.14■□□□□ 0.33
RAB11FIP3-204ENST00000449879 MMAAQ8IVH4 418 aaKnown RBP17.14■□□□□ 0.33
RAB11FIP3-204ENST00000449879 APCDD1Q8J025 514 aa17.14■□□□□ 0.33
RAB11FIP3-204ENST00000449879 BTN2A3PQ96KV6 586 aa17.14■□□□□ 0.33
RAB11FIP3-204ENST00000449879 RPL10LQ96L21 214 aaKnown RBP17.14■□□□□ 0.33
RAB11FIP3-204ENST00000449879 OMDQ99983 421 aa17.14■□□□□ 0.33
RAB11FIP3-204ENST00000449879 NEUROG2Q9H2A3 272 aa17.14■□□□□ 0.33
RAB11FIP3-204ENST00000449879 OSGEPQ9NPF4 335 aa17.14■□□□□ 0.33
RAB11FIP3-204ENST00000449879 SERGEFQ9UGK8 458 aa17.14■□□□□ 0.33
RAB11FIP3-204ENST00000449879 SLC12A6Q9UHW9 1150 aa17.14■□□□□ 0.33
RAB11FIP3-204ENST00000449879 PCDHGB2Q9Y5G2 931 aa17.14■□□□□ 0.33
RAB11FIP3-204ENST00000449879 ZFHX4Q86UP3 3567 aa17.14■□□□□ 0.33
RAB11FIP3-204ENST00000449879 ASPMQ8IZT6 3477 aa17.13■□□□□ 0.33
RAB11FIP3-204ENST00000449879 SYNJ2BP-COX16A0A087WUM0 186 aa17.13■□□□□ 0.33
RAB11FIP3-204ENST00000449879 A0A1W2PP55 124 aa17.13■□□□□ 0.33
RAB11FIP3-204ENST00000449879 BECN2A8MW95 431 aa17.13■□□□□ 0.33
RAB11FIP3-204ENST00000449879 KCNU1A8MYU2 1149 aa17.13■□□□□ 0.33
RAB11FIP3-204ENST00000449879 F5H5T6 163 aa17.13■□□□□ 0.33
RAB11FIP3-204ENST00000449879 FLRT2O43155 660 aa17.13■□□□□ 0.33
RAB11FIP3-204ENST00000449879 RNASEH2AO75792 299 aaKnown RBP17.13■□□□□ 0.33
RAB11FIP3-204ENST00000449879 SRPRAP08240 638 aaKnown RBP17.13■□□□□ 0.33
RAB11FIP3-204ENST00000449879 ERCC5P28715 1186 aaPredicted RBP17.13■□□□□ 0.33
RAB11FIP3-204ENST00000449879 SLC8A1P32418 973 aa17.13■□□□□ 0.33
RAB11FIP3-204ENST00000449879 GALCP54803 685 aa17.13■□□□□ 0.33
RAB11FIP3-204ENST00000449879 SFSWAPQ12872 951 aaKnown RBP17.13■□□□□ 0.33
RAB11FIP3-204ENST00000449879 PDCLQ13371 301 aa17.13■□□□□ 0.33
RAB11FIP3-204ENST00000449879 CST6Q15828 149 aa17.13■□□□□ 0.33
RAB11FIP3-204ENST00000449879 TPD52L1Q16890 204 aaPredicted RBP17.13■□□□□ 0.33
RAB11FIP3-204ENST00000449879 RNF219Q5W0B1 726 aaPredicted RBP17.13■□□□□ 0.33
RAB11FIP3-204ENST00000449879 KIAA0895LQ68EN5 471 aa17.13■□□□□ 0.33
RAB11FIP3-204ENST00000449879 DBX2Q6ZNG2 339 aa17.13■□□□□ 0.33
RAB11FIP3-204ENST00000449879 ATP6V0D2Q8N8Y2 350 aa17.13■□□□□ 0.33
RAB11FIP3-204ENST00000449879 KDM1BQ8NB78 822 aa17.13■□□□□ 0.33
RAB11FIP3-204ENST00000449879 RNF34Q969K3 372 aa17.13■□□□□ 0.33
RAB11FIP3-204ENST00000449879 FAM81BQ96LP2 452 aa17.13■□□□□ 0.33
RAB11FIP3-204ENST00000449879 CDC6Q99741 560 aa17.13■□□□□ 0.33
RAB11FIP3-204ENST00000449879 SLTMQ9NWH9 1034 aaKnown RBP eCLIP17.13■□□□□ 0.331e-6■■■□□ 15.1
RAB11FIP3-204ENST00000449879 COX16Q9P0S2 106 aa17.13■□□□□ 0.33
RAB11FIP3-204ENST00000449879 EDDM13A0A1B0GTR0 161 aa17.12■□□□□ 0.33
RAB11FIP3-204ENST00000449879 TARSL2A2RTX5 802 aaKnown RBP17.12■□□□□ 0.33
RAB11FIP3-204ENST00000449879 GOLGA8CPA6NN73 597 aa17.12■□□□□ 0.33
RAB11FIP3-204ENST00000449879 IGLV3-25P01717 112 aa17.12■□□□□ 0.33
RAB11FIP3-204ENST00000449879 IGHV4-34P06331 123 aa17.12■□□□□ 0.33
RAB11FIP3-204ENST00000449879 ATXN1LP0C7T5 689 aaKnown RBP17.12■□□□□ 0.33
RAB11FIP3-204ENST00000449879 CDK17Q00537 523 aa17.12■□□□□ 0.33
RAB11FIP3-204ENST00000449879 ARID5BQ14865 1188 aa17.12■□□□□ 0.33
RAB11FIP3-204ENST00000449879 CT47A1Q5JQC4 288 aaPredicted RBP17.12■□□□□ 0.33
RAB11FIP3-204ENST00000449879 KCNT1Q5JUK3 1230 aa17.12■□□□□ 0.33
RAB11FIP3-204ENST00000449879 NCEH1Q6PIU2 408 aa17.12■□□□□ 0.33
RAB11FIP3-204ENST00000449879 GBP6Q6ZN66 633 aa17.12■□□□□ 0.33
RAB11FIP3-204ENST00000449879 CIR1Q86X95 450 aaPredicted RBP17.12■□□□□ 0.33
RAB11FIP3-204ENST00000449879 PASD1Q8IV76 773 aa17.12■□□□□ 0.33
RAB11FIP3-204ENST00000449879 DEFB106AQ8N104 65 aa17.12■□□□□ 0.33
RAB11FIP3-204ENST00000449879 STK40Q8N2I9 435 aa17.12■□□□□ 0.33
RAB11FIP3-204ENST00000449879 WDTC1Q8N5D0 677 aa17.12■□□□□ 0.33
RAB11FIP3-204ENST00000449879 PPP1R13BQ96KQ4 1090 aa17.12■□□□□ 0.33
RAB11FIP3-204ENST00000449879 CPXM1Q96SM3 734 aa17.12■□□□□ 0.33
RAB11FIP3-204ENST00000449879 FAM129BQ96TA1 746 aa17.12■□□□□ 0.33
RAB11FIP3-204ENST00000449879 ORAI3Q9BRQ5 295 aa17.12■□□□□ 0.33
RAB11FIP3-204ENST00000449879 FAM204AQ9H8W3 233 aa17.12■□□□□ 0.33
RAB11FIP3-204ENST00000449879 DDIT4Q9NX09 232 aa17.12■□□□□ 0.33
RAB11FIP3-204ENST00000449879 BTBD3Q9Y2F9 522 aa17.12■□□□□ 0.33
RAB11FIP3-204ENST00000449879 PKD1L2Q7Z442 2459 aa17.12■□□□□ 0.33
RAB11FIP3-204ENST00000449879 TMEM131Q92545 1883 aa17.12■□□□□ 0.33
RAB11FIP3-204ENST00000449879 H0Y8X5 98 aa17.11■□□□□ 0.33
RAB11FIP3-204ENST00000449879 GRAP2O75791 330 aa17.11■□□□□ 0.33
RAB11FIP3-204ENST00000449879 PDGFRAP16234 1089 aa17.11■□□□□ 0.33
RAB11FIP3-204ENST00000449879 ABCB4P21439 1286 aa17.11■□□□□ 0.33
RAB11FIP3-204ENST00000449879 NNMTP40261 264 aa17.11■□□□□ 0.33
RAB11FIP3-204ENST00000449879 PSMD8P48556 350 aa17.11■□□□□ 0.33
RAB11FIP3-204ENST00000449879 STK19P49842 368 aaPredicted RBP17.11■□□□□ 0.33
RAB11FIP3-204ENST00000449879 C21orf59P57076 290 aa17.11■□□□□ 0.33
RAB11FIP3-204ENST00000449879 SCAPQ12770 1279 aa17.11■□□□□ 0.33
RAB11FIP3-204ENST00000449879 EXOC3L4Q17RC7 722 aa17.11■□□□□ 0.33
RAB11FIP3-204ENST00000449879 PRAMEF14Q5SWL7 426 aa17.11■□□□□ 0.33
RAB11FIP3-204ENST00000449879 SASS6Q6UVJ0 657 aa17.11■□□□□ 0.33
RAB11FIP3-204ENST00000449879 CCNI2Q6ZMN8 369 aaPredicted RBP17.11■□□□□ 0.33
RAB11FIP3-204ENST00000449879 CCAR2Q8N163 923 aaKnown RBP17.11■□□□□ 0.33
RAB11FIP3-204ENST00000449879 BAHD1Q8TBE0 780 aaPredicted RBP17.11■□□□□ 0.33
RAB11FIP3-204ENST00000449879 PTPRN2Q92932 1015 aa17.11■□□□□ 0.33
RAB11FIP3-204ENST00000449879 IGSF8Q969P0 613 aa17.11■□□□□ 0.33
RAB11FIP3-204ENST00000449879 APEX2Q9UBZ4 518 aa17.11■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms