RNA–Protein interactions for RNA: ENST00000448971.5

USP39-206, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 3

Gene USP39, Length 610 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-206ENST00000448971 MTA1Q13330 715 aa15.06■□□□□ 0
USP39-206ENST00000448971 EIF4HQ15056 248 aaKnown RBP15.06■□□□□ 0
USP39-206ENST00000448971 CDO1Q16878 200 aa15.06■□□□□ 0
USP39-206ENST00000448971 SLC25A52Q3SY17 297 aa15.06■□□□□ 0
USP39-206ENST00000448971 SDE2Q6IQ49 451 aa15.06■□□□□ 0
USP39-206ENST00000448971 ANO7Q6IWH7 933 aa15.06■□□□□ 0
USP39-206ENST00000448971 PPP1R2P3Q6NXS1 205 aa15.06■□□□□ 0
USP39-206ENST00000448971 DNAJC24Q6P3W2 148 aa15.06■□□□□ 0
USP39-206ENST00000448971 MON1BQ7L1V2 547 aa15.06■□□□□ 0
USP39-206ENST00000448971 CARNMT1Q8N4J0 409 aa15.06■□□□□ 0
USP39-206ENST00000448971 C3orf20Q8ND61 904 aa15.06■□□□□ 0
USP39-206ENST00000448971 POLMQ9NP87 494 aaPredicted RBP15.06■□□□□ 0
USP39-206ENST00000448971 ABCB8Q9NUT2 735 aa15.06■□□□□ 0
USP39-206ENST00000448971 AIPL1Q9NZN9 384 aa15.06■□□□□ 0
USP39-206ENST00000448971 CALCOCO1Q9P1Z2 691 aa15.06■□□□□ 0
USP39-206ENST00000448971 GGA2Q9UJY4 613 aa15.06■□□□□ 0
USP39-206ENST00000448971 TMEM59LQ9UK28 342 aa15.06■□□□□ 0
USP39-206ENST00000448971 FBXO10Q9UK96 956 aa15.06■□□□□ 0
USP39-206ENST00000448971 ITIH6Q6UXX5 1313 aa15.06■□□□□ 0
USP39-206ENST00000448971 TCRBV21S2A2A0A5A6 115 aa15.05■□□□□ -0
USP39-206ENST00000448971 ANKRD62A6NC57 917 aa15.05■□□□□ -0
USP39-206ENST00000448971 ALDH1A2O94788 518 aa15.05■□□□□ -0
USP39-206ENST00000448971 GJB6O95452 261 aa15.05■□□□□ -0
USP39-206ENST00000448971 F9P00740 461 aa15.05■□□□□ -0
USP39-206ENST00000448971 PABPC1P11940 636 aaKnown RBP15.05■□□□□ -0
USP39-206ENST00000448971 KRT3P12035 628 aa15.05■□□□□ -0
USP39-206ENST00000448971 HLA-FP30511 346 aa15.05■□□□□ -0
USP39-206ENST00000448971 PRKCIP41743 596 aa15.05■□□□□ -0
USP39-206ENST00000448971 GSCP56915 257 aaPredicted RBP15.05■□□□□ -0
USP39-206ENST00000448971 ATP11AP98196 1134 aa15.05■□□□□ -0
USP39-206ENST00000448971 PTP4A2Q12974 167 aa15.05■□□□□ -0
USP39-206ENST00000448971 EIF4EBP2Q13542 120 aaPredicted RBP15.05■□□□□ -0
USP39-206ENST00000448971 BRMS1LQ5PSV4 323 aa15.05■□□□□ -0
USP39-206ENST00000448971 RABGAP1LQ5R372 815 aa15.05■□□□□ -0
USP39-206ENST00000448971 MPP7Q5T2T1 576 aa15.05■□□□□ -0
USP39-206ENST00000448971 TRNP1Q6NT89 227 aa15.05■□□□□ -0
USP39-206ENST00000448971 AHI1Q8N157 1196 aa15.05■□□□□ -0
USP39-206ENST00000448971 CFAP52Q8N1V2 620 aa15.05■□□□□ -0
USP39-206ENST00000448971 JOSD2Q8TAC2 188 aa15.05■□□□□ -0
USP39-206ENST00000448971 WFDC5Q8TCV5 224 aa15.05■□□□□ -0
USP39-206ENST00000448971 KCNV2Q8TDN2 545 aa15.05■□□□□ -0
USP39-206ENST00000448971 WFIKKN2Q8TEU8 576 aa15.05■□□□□ -0
USP39-206ENST00000448971 GATA6Q92908 595 aa15.05■□□□□ -0
USP39-206ENST00000448971 MYEOVQ96EZ4 313 aa15.05■□□□□ -0
USP39-206ENST00000448971 PGAP3Q96FM1 320 aaPredicted RBP15.05■□□□□ -0
USP39-206ENST00000448971 RPRD1AQ96P16 312 aaPredicted RBP15.05■□□□□ -0
USP39-206ENST00000448971 TKTL2Q9H0I9 626 aa15.05■□□□□ -0
USP39-206ENST00000448971 WDCPQ9H6R7 721 aa15.05■□□□□ -0
USP39-206ENST00000448971 TMEM74BQ9NUR3 256 aa15.05■□□□□ -0
USP39-206ENST00000448971 CACNA2D2Q9NY47 1150 aa15.05■□□□□ -0
USP39-206ENST00000448971 BCCIPQ9P287 314 aaKnown RBP eCLIP15.05■□□□□ -0
USP39-206ENST00000448971 EVLQ9UI08 416 aaPredicted RBP15.05■□□□□ -0
USP39-206ENST00000448971 STARD13Q9Y3M8 1113 aa15.05■□□□□ -0
USP39-206ENST00000448971 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP15.05■□□□□ -0
USP39-206ENST00000448971 FREM2Q5SZK8 3169 aa15.05■□□□□ -0
USP39-206ENST00000448971 ANKRD11Q6UB99 2663 aaPredicted RBP15.04■□□□□ -0
USP39-206ENST00000448971 H0Y626 953 aa15.04■□□□□ -0
USP39-206ENST00000448971 LUC7L3O95232 432 aaKnown RBP15.04■□□□□ -0
USP39-206ENST00000448971 GYPCP04921 128 aa15.04■□□□□ -0
USP39-206ENST00000448971 SKILP12757 684 aa15.04■□□□□ -0
USP39-206ENST00000448971 PDGFRAP16234 1089 aa15.04■□□□□ -0
USP39-206ENST00000448971 DESP17661 470 aa15.04■□□□□ -0
USP39-206ENST00000448971 NTSR1P30989 418 aa15.04■□□□□ -0
USP39-206ENST00000448971 P2RY2P41231 377 aa15.04■□□□□ -0
USP39-206ENST00000448971 DHPSP49366 369 aaPredicted RBP15.04■□□□□ -0
USP39-206ENST00000448971 ZBED6P86452 979 aa15.04■□□□□ -0
USP39-206ENST00000448971 TRIM14Q14142 442 aa15.04■□□□□ -0
USP39-206ENST00000448971 TTC39BQ5VTQ0 682 aaPredicted RBP15.04■□□□□ -0
USP39-206ENST00000448971 ACAD10Q6JQN1 1059 aa15.04■□□□□ -0
USP39-206ENST00000448971 CHST9Q7L1S5 443 aa15.04■□□□□ -0
USP39-206ENST00000448971 ARCQ7LC44 396 aa15.04■□□□□ -0
USP39-206ENST00000448971 ZNF571Q7Z3V5 609 aaPredicted RBP15.04■□□□□ -0
USP39-206ENST00000448971 CYP2U1Q7Z449 544 aa15.04■□□□□ -0
USP39-206ENST00000448971 VPS36Q86VN1 386 aa15.04■□□□□ -0
USP39-206ENST00000448971 CIR1Q86X95 450 aaPredicted RBP15.04■□□□□ -0
USP39-206ENST00000448971 FAM131BQ86XD5 332 aa15.04■□□□□ -0
USP39-206ENST00000448971 FRMD1Q8N878 549 aa15.04■□□□□ -0
USP39-206ENST00000448971 RXFP2Q8WXD0 754 aa15.04■□□□□ -0
USP39-206ENST00000448971 RLN3Q8WXF3 142 aa15.04■□□□□ -0
USP39-206ENST00000448971 PIGKQ92643 395 aa15.04■□□□□ -0
USP39-206ENST00000448971 MCEEQ96PE7 176 aa15.04■□□□□ -0
USP39-206ENST00000448971 ACOX2Q99424 681 aa15.04■□□□□ -0
USP39-206ENST00000448971 SYT11Q9BT88 431 aa15.04■□□□□ -0
USP39-206ENST00000448971 SCNM1Q9BWG6 230 aa15.04■□□□□ -0
USP39-206ENST00000448971 ADAM33Q9BZ11 813 aa15.04■□□□□ -0
USP39-206ENST00000448971 TAS2R14Q9NYV8 317 aa15.04■□□□□ -0
USP39-206ENST00000448971 VANGL2Q9ULK5 521 aa15.04■□□□□ -0
USP39-206ENST00000448971 LUC7L2Q9Y383 392 aaKnown RBP15.04■□□□□ -0
USP39-206ENST00000448971 HS3ST4Q9Y661 456 aa15.04■□□□□ -0
USP39-206ENST00000448971 TNRC6BQ9UPQ9 1833 aaKnown RBP15.03■□□□□ -0
USP39-206ENST00000448971 A0A1B0GVM2 712 aa15.03■□□□□ -0
USP39-206ENST00000448971 TCAF2A6NFQ2 919 aa15.03■□□□□ -0
USP39-206ENST00000448971 ATMINO43313 823 aaPredicted RBP15.03■□□□□ -0
USP39-206ENST00000448971 ADAM23O75077 832 aa15.03■□□□□ -0
USP39-206ENST00000448971 PAGE1O75459 146 aa15.03■□□□□ -0
USP39-206ENST00000448971 ADCY5O95622 1261 aa15.03■□□□□ -0
USP39-206ENST00000448971 TPM1P09493 284 aa15.03■□□□□ -0
USP39-206ENST00000448971 GPD1P21695 349 aa15.03■□□□□ -0
USP39-206ENST00000448971 CASP14P31944 242 aa15.03■□□□□ -0
USP39-206ENST00000448971 CD70P32970 193 aa15.03■□□□□ -0
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms