RNA–Protein interactions for RNA: ENST00000446312.5

DDR1-238, Transcript of discoidin domain receptor tyrosine kinase 1, humanhuman

TSL 5 BASIC

Gene DDR1, Length 3,202 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1-238ENST00000446312 H0YCG3 227 aa12.84□□□□□ -0.35
DDR1-238ENST00000446312 DNAJA2O60884 412 aa12.84□□□□□ -0.35
DDR1-238ENST00000446312 FGF3P11487 239 aaPredicted RBP12.84□□□□□ -0.35
DDR1-238ENST00000446312 XRCC1P18887 633 aaPredicted RBP12.84□□□□□ -0.35
DDR1-238ENST00000446312 LMO2P25791 158 aa12.84□□□□□ -0.35
DDR1-238ENST00000446312 NDUFV1P49821 464 aa12.84□□□□□ -0.35
DDR1-238ENST00000446312 BTG3Q14201 252 aaPredicted RBP12.84□□□□□ -0.35
DDR1-238ENST00000446312 STILQ15468 1287 aa12.84□□□□□ -0.35
DDR1-238ENST00000446312 CNGA3Q16281 694 aa12.84□□□□□ -0.35
DDR1-238ENST00000446312 TMEM53Q6P2H8 277 aa12.84□□□□□ -0.35
DDR1-238ENST00000446312 MPZL3Q6UWV2 235 aa12.84□□□□□ -0.35
DDR1-238ENST00000446312 STRA8Q7Z7C7 330 aa12.84□□□□□ -0.35
DDR1-238ENST00000446312 ICA1LQ8NDH6 482 aa12.84□□□□□ -0.35
DDR1-238ENST00000446312 RCN3Q96D15 328 aa12.84□□□□□ -0.35
DDR1-238ENST00000446312 SPATA16Q9BXB7 569 aa12.84□□□□□ -0.35
DDR1-238ENST00000446312 THAP1Q9NVV9 213 aa12.84□□□□□ -0.35
DDR1-238ENST00000446312 AP4E1Q9UPM8 1137 aa12.84□□□□□ -0.35
DDR1-238ENST00000446312 DTNAQ9Y4J8 743 aa12.84□□□□□ -0.35
DDR1-238ENST00000446312 TIMM13Q9Y5L4 95 aaPredicted RBP12.84□□□□□ -0.35
DDR1-238ENST00000446312 GMEB1Q9Y692 573 aa12.84□□□□□ -0.35
DDR1-238ENST00000446312 ZNF646O15015 1829 aaPredicted RBP12.84□□□□□ -0.35
DDR1-238ENST00000446312 NEMP2A6NFY4 417 aa12.84□□□□□ -0.35
DDR1-238ENST00000446312 BOLA2-SMG1P6H3BVE0 249 aa12.84□□□□□ -0.35
DDR1-238ENST00000446312 ITGAXP20702 1163 aa12.84□□□□□ -0.35
DDR1-238ENST00000446312 ADARP55265 1226 aaKnown RBP12.84□□□□□ -0.35
DDR1-238ENST00000446312 HDAC4P56524 1084 aa12.84□□□□□ -0.35
DDR1-238ENST00000446312 CLDN10P78369 228 aa12.84□□□□□ -0.35
DDR1-238ENST00000446312 RALGDSQ12967 914 aa12.84□□□□□ -0.35
DDR1-238ENST00000446312 PACS1Q6VY07 963 aa12.84□□□□□ -0.35
DDR1-238ENST00000446312 ZNF534Q76KX8 674 aa12.84□□□□□ -0.35
DDR1-238ENST00000446312 CHSY1Q86X52 802 aa12.84□□□□□ -0.35
DDR1-238ENST00000446312 ATP2A3Q93084 1043 aa12.84□□□□□ -0.35
DDR1-238ENST00000446312 CLIP3Q96DZ5 547 aa12.84□□□□□ -0.35
DDR1-238ENST00000446312 MPHOSPH6Q99547 160 aaKnown RBP12.84□□□□□ -0.35
DDR1-238ENST00000446312 PCDHAC1Q9H158 963 aa12.84□□□□□ -0.35
DDR1-238ENST00000446312 KLHL8Q9P2G9 620 aaPredicted RBP12.84□□□□□ -0.35
DDR1-238ENST00000446312 TMA7Q9Y2S6 64 aaKnown RBP12.84□□□□□ -0.35
DDR1-238ENST00000446312 MAFBQ9Y5Q3 323 aaPredicted RBP12.84□□□□□ -0.35
DDR1-238ENST00000446312 ATP6AP2A0A1C7CYW4 349 aa12.84□□□□□ -0.35
DDR1-238ENST00000446312 TMEM247A6NEH6 219 aa12.84□□□□□ -0.35
DDR1-238ENST00000446312 SDR42E2A6NKP2 422 aa12.84□□□□□ -0.35
DDR1-238ENST00000446312 A8MXQ7 604 aa12.84□□□□□ -0.35
DDR1-238ENST00000446312 MFSD11O43934 449 aa12.84□□□□□ -0.35
DDR1-238ENST00000446312 ATP6AP2O75787 350 aa12.84□□□□□ -0.35
DDR1-238ENST00000446312 HOXD11P31277 338 aaPredicted RBP12.84□□□□□ -0.35
DDR1-238ENST00000446312 GALK1P51570 392 aa12.84□□□□□ -0.35
DDR1-238ENST00000446312 POU5F1BQ06416 359 aa12.84□□□□□ -0.35
DDR1-238ENST00000446312 TTLL12Q14166 644 aaPredicted RBP12.84□□□□□ -0.35
DDR1-238ENST00000446312 KRT72Q14CN4 511 aa12.84□□□□□ -0.35
DDR1-238ENST00000446312 TLR1Q15399 786 aa12.84□□□□□ -0.35
DDR1-238ENST00000446312 THOC7Q6I9Y2 204 aaKnown RBP12.84□□□□□ -0.35
DDR1-238ENST00000446312 NET1Q7Z628 596 aaPredicted RBP12.84□□□□□ -0.35
DDR1-238ENST00000446312 AMIGO2Q86SJ2 522 aa12.84□□□□□ -0.35
DDR1-238ENST00000446312 IQCF2Q8IXL9 164 aa12.84□□□□□ -0.35
DDR1-238ENST00000446312 RAB3IL1Q8TBN0 382 aa12.84□□□□□ -0.35
DDR1-238ENST00000446312 SEPT1Q8WYJ6 367 aa12.84□□□□□ -0.35
DDR1-238ENST00000446312 SPATA17Q96L03 361 aa12.84□□□□□ -0.35
DDR1-238ENST00000446312 TUBB6Q9BUF5 446 aa12.84□□□□□ -0.35
DDR1-238ENST00000446312 SSX2IPQ9Y2D8 614 aa12.84□□□□□ -0.35
DDR1-238ENST00000446312 KIAA1217Q5T5P2 1943 aa12.83□□□□□ -0.36
DDR1-238ENST00000446312 C15orf38-AP3S2A0A0A6YYH1 394 aa12.83□□□□□ -0.36
DDR1-238ENST00000446312 RNF103O00237 685 aa12.83□□□□□ -0.36
DDR1-238ENST00000446312 NPM3O75607 178 aaKnown RBP12.83□□□□□ -0.36
DDR1-238ENST00000446312 ITGA2BP08514 1039 aa12.83□□□□□ -0.36
DDR1-238ENST00000446312 CPOXP36551 454 aa12.83□□□□□ -0.36
DDR1-238ENST00000446312 PSMD7P51665 324 aa12.83□□□□□ -0.36
DDR1-238ENST00000446312 NAGLUP54802 743 aa12.83□□□□□ -0.36
DDR1-238ENST00000446312 PCLAFQ15004 111 aa12.83□□□□□ -0.36
DDR1-238ENST00000446312 TMCO4Q5TGY1 634 aa12.83□□□□□ -0.36
DDR1-238ENST00000446312 ARPINQ7Z6K5 226 aa12.83□□□□□ -0.36
DDR1-238ENST00000446312 KCTD15Q96SI1 283 aaPredicted RBP12.83□□□□□ -0.36
DDR1-238ENST00000446312 TBCBQ99426 244 aa12.83□□□□□ -0.36
DDR1-238ENST00000446312 SLC39A3Q9BRY0 314 aa12.83□□□□□ -0.36
DDR1-238ENST00000446312 IARS2Q9NSE4 1012 aaKnown RBP12.83□□□□□ -0.36
DDR1-238ENST00000446312 C20orf96Q9NUD7 363 aaPredicted RBP12.83□□□□□ -0.36
DDR1-238ENST00000446312 TLL2Q9Y6L7 1015 aa12.83□□□□□ -0.36
DDR1-238ENST00000446312 SOWAHBA6NEL2 793 aa12.83□□□□□ -0.36
DDR1-238ENST00000446312 SERPINA6P08185 405 aa12.83□□□□□ -0.36
DDR1-238ENST00000446312 HNRNPLP14866 589 aaKnown RBP eCLIP12.83□□□□□ -0.362e-10■■■□□ 15.1
DDR1-238ENST00000446312 CPA3P15088 417 aa12.83□□□□□ -0.36
DDR1-238ENST00000446312 THOP1P52888 689 aa12.83□□□□□ -0.36
DDR1-238ENST00000446312 CDH15P55291 814 aa12.83□□□□□ -0.36
DDR1-238ENST00000446312 PLOD1Q02809 727 aaPredicted RBP12.83□□□□□ -0.36
DDR1-238ENST00000446312 ITGA7Q13683 1181 aa12.83□□□□□ -0.36
DDR1-238ENST00000446312 DNAL1Q4LDG9 190 aa12.83□□□□□ -0.36
DDR1-238ENST00000446312 MARK2Q7KZI7 788 aaKnown RBP12.83□□□□□ -0.36
DDR1-238ENST00000446312 DEFB132Q7Z7B7 95 aa12.83□□□□□ -0.36
DDR1-238ENST00000446312 LZICQ8WZA0 190 aa12.83□□□□□ -0.36
DDR1-238ENST00000446312 OTUD5Q96G74 571 aa12.83□□□□□ -0.36
DDR1-238ENST00000446312 CENPKQ9BS16 269 aa12.83□□□□□ -0.36
DDR1-238ENST00000446312 TASP1Q9H6P5 420 aa12.83□□□□□ -0.36
DDR1-238ENST00000446312 SIRPGQ9P1W8 387 aa12.83□□□□□ -0.36
DDR1-238ENST00000446312 RABL2AQ9UBK7 228 aaPredicted RBP12.83□□□□□ -0.36
DDR1-238ENST00000446312 HESX1Q9UBX0 185 aa12.83□□□□□ -0.36
DDR1-238ENST00000446312 PALM2-AKAP2B1ALY0 433 aaPredicted RBP12.83□□□□□ -0.36
DDR1-238ENST00000446312 CCL22O00626 93 aa12.83□□□□□ -0.36
DDR1-238ENST00000446312 BUD23O43709 281 aaKnown RBP12.83□□□□□ -0.36
DDR1-238ENST00000446312 FAM189A1O60320 539 aa12.83□□□□□ -0.36
DDR1-238ENST00000446312 PLIN3O60664 434 aa12.83□□□□□ -0.36
DDR1-238ENST00000446312 CILPO75339 1184 aa12.83□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 14.9 ms